prot_F-serratus_M_contig927.20656.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig927.20656.1
Unique Nameprot_F-serratus_M_contig927.20656.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length656
Homology
BLAST of mRNA_F-serratus_M_contig927.20656.1 vs. uniprot
Match: D8LB48_ECTSI (Pseudouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB48_ECTSI)

HSP 1 Score: 566 bits (1460), Expect = 5.830e-193
Identity = 313/579 (54.06%), Postives = 374/579 (64.59%), Query Frame = 0
Query:   80 RSEKGHSKRRRXXXXXXXRKERALAQA-EKCEYYHDDQGLRRVRPYIYDFQTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNCKSIDLDYVFKNNDVVCNRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPELSLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGKTRKTYLARVSGNFGQRLPPERRQAGSPSTFAESCSAPPTRASPSEAVASTDARGRTFLTPKTGEGNSSADRVIEDAGGTSSPSGSELAAIPKALDGPGELWWRYETPGERVVRGFQKEDGDDVRPNETVNGAVPNTGDNANSAIAILSEDDGGAEE-ISIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDFSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARRRMEENPSL-GGWKGTKPTTATXXXXXXAAIPGKREGAECSSQENSIMANMENAHGRSAAAVEGALHSPKDNSTPEAKLGNAHGGVTVHQGKPGSEGGSTVEGN-VTANRDEQDDEAFVGFDWVFETKMPAWAT 654
            R + G  KR R       RK++ALA A EKCEYY DD GLRRVRPYIYDFQTHAKERWLGR V+DVFSAEFGG  RS+YE A+R GLLTVN   + +DY  +N+D++CN+THRHEPPV GGDIPIVSESA+E+VVDKPCTVPIHPCGSYRFNTLFYI+ RQRP+L+LRVCHRLDRLTSGLTIFAKTAERAGVIQKQIG+G+TRKTYLARVSG+FGQRLP +RR+ GSPS                                                                      ELWWRYE+ GE VV+G        +R +  ++G      +++ S+  + S   GG +E +++RVNCPIRVLD K GVYECH  GKEAQTV+RKV YD +SDTSV+ECTPVHGRTHQIRLHLQW GHPIANDPCYGG+LHFG+PEA+RR EENP L GGWKG   + +T      +   G+ E  +  + E +  A ME        AVEG          P+A +G    G+     +  + GG    G+ V   R+ +DDE F+G DW FETKMP+WAT
Sbjct:   51 RGDDGRGKRPRKGDAKRERKKKALAHAAEKCEYYVDDHGLRRVRPYIYDFQTHAKERWLGRTVVDVFSAEFGGEARSHYENAVRGGLLTVNGNKVGVDYELQNSDLICNKTHRHEPPVCGGDIPIVSESAEELVVDKPCTVPIHPCGSYRFNTLFYIMHRQRPDLTLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGSGRTRKTYLARVSGDFGQRLPLDRRKQGSPSXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATDELWWRYESLGEGVVKGR-------LRSSGAISGEEGGLAESSASSGGVGSGGAGGEKEGVTVRVNCPIRVLDPKHGVYECHPSGKEAQTVVRKVGYDTASDTSVVECTPVHGRTHQIRLHLQWAGHPIANDPCYGGELHFGNPEAKRRAEENPDLEGGWKGVPGSNSTAAAGRGSM--GENEARQPRTSEAADGAGMEVDGDSGDWAVEGD-GGRGGGGAPDAVVGAPDAGIAGASVEEAAVGGVVSSGDGVEGQREGEDDEKFMGPDWAFETKMPSWAT 614          
BLAST of mRNA_F-serratus_M_contig927.20656.1 vs. uniprot
Match: A0A6H5KK40_9PHAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK40_9PHAE)

HSP 1 Score: 393 bits (1009), Expect = 1.070e-127
Identity = 221/392 (56.38%), Postives = 253/392 (64.54%), Query Frame = 0
Query:   80 RSEKGHSKRRRXXXXXXXRKERALAQA-EKCEYYHDDQGLRRVRPYIYDFQTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNCKSIDLDYVFKNNDVVCNRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPELSLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGKTRKTYLARVSGNFGQRLPPERRQAGSPSTFAESCSAPPTRASPSEAVASTDARGRTFLTPKTGEGNSSADRVIEDAGGTSSPSGSELAAIPKALDGPGELWWRYETPGERVVRGFQKEDGDDVRPNETVNGAVPNTGDNANSAIAILSEDDGGA----EEISIRVNCPIRVLDAKDGVYECHAEGKEAQTV 466
            R + G  KR R       RK++ALA A EKCEYY D  GLRRVRPYIY+FQTHAKERWLGR V+DVFSAEFGG PRS+YE AIR GLLTVN   + +DY  +N+D++CNRTHRHEPPV GGDIPIV ESA+E+VVDKPCTVPIHPCGSYRFNTLFYI+ RQRP+L+LRVCHRLDRLTSGLTIFAKTAERAGVIQKQIG G+TRKTYLARVSG+FGQRLP +RR+ GSPS                                                                      ELWWRYE+ GE VV+G        +R +  V+G     G  A S+++      GGA    E +++RVNCPIRVLD K GVYECH  GKEAQTV
Sbjct:   31 RGDDGRGKRPRKGDAKRERKKKALAHASEKCEYYVDGHGLRRVRPYIYNFQTHAKERWLGRTVVDVFSAEFGGEPRSHYENAIRGGLLTVNGNKVGVDYELQNSDLICNRTHRHEPPVCGGDIPIVFESAEELVVDKPCTVPIHPCGSYRFNTLFYIMHRQRPDLTLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGLGRTRKTYLARVSGDFGQRLPLDRRKQGSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXADELWWRYESLGEGVVKGR-------LRSSGAVSGEE---GGLAESSVSSGRAGGGGAGGEKEGVTVRVNCPIRVLDPKHGVYECHPSGKEAQTV 406          
BLAST of mRNA_F-serratus_M_contig927.20656.1 vs. uniprot
Match: A0A8K1CHM9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHM9_PYTOL)

HSP 1 Score: 256 bits (653), Expect = 3.020e-74
Identity = 151/415 (36.39%), Postives = 208/415 (50.12%), Query Frame = 0
Query:  110 EYYHDDQGLRRVRPYIYDFQTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNCKSIDLDYVFKNNDVVCNRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGKTRKTYLARVSGNFGQRLPPERRQAGSPSTFAESCSAPPTRASPSEAVASTDARGRTFLTPKTGEGNSSADRVIEDAGGTSSPSGSELAAIPKALDGPGELWWRYETPGERVVRGFQKEDGDDVRPNETVNGAVPNTGDNANSAIAILSEDDGGAEEISIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDFSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARR 523
            EY+ +D G R V+PY+Y+++T+AKERWLGR +I +F+ EFG N   YY+ AI+ G +TVN K +  + + KN D++ ++ HRHEPPV G ++PI  E  D +VV KP ++P HPCG+YR N+L  I+ R RP+L  L + HRLDRLTSG+ I AK+  +A  + + I   +  KTYLARV G+                              P+EA                                                                          DD    + V  A  N      +A  I   DD      +I ++CP+R L  +D V+ECH EGKE+QT +R +  D    T+++EC P+ GRTHQIRLHLQ +G PIANDPCYGG+LHFG+   RR
Sbjct:   86 EYFFED-GYRFVKPYLYEYRTYAKERWLGRPLISMFTEEFGANSPEYYQAAIQSGRITVNDKIVTPETIIKNRDLILHKAHRHEPPVIGEEVPIAYEDDDLLVVVKPSSMPTHPCGAYRHNSLHTIVHRMRPDLPQLNIVHRLDRLTSGIVILAKSGVKAKALSQCISDREASKTYLARVRGHL-----------------------------PTEAF-------------------------------------------------------------------------DDAFKQQLVATAAKNC-----AASEITFPDDQ-----TIHISCPLRCLSQRDAVWECHEEGKESQTRVRVLRID--QQTTLVECKPITGRTHQIRLHLQLLGFPIANDPCYGGELHFGESSERR 385          
BLAST of mRNA_F-serratus_M_contig927.20656.1 vs. uniprot
Match: A0A2P4WXF4_9STRA (RNA pseudouridylate synthase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WXF4_9STRA)

HSP 1 Score: 254 bits (649), Expect = 5.310e-74
Identity = 148/413 (35.84%), Postives = 203/413 (49.15%), Query Frame = 0
Query:  117 GLRRVRPYIYDFQTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNCKSIDLDYVFKNNDVVCNRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGKTRKTYLARVSGNFGQRLPPERRQAGSPSTFAESCSAPPTRASPSEAVASTDARGRTFLTPKTGEGNSSADRVIEDAGGTSSPSGSELAAIPKALDGPGELWWRYETPGERVVRGFQKEDGDDVRPNETVNGAVPNTGDNANSAIAILSEDDGGAEEISIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDFSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARRRMEEN 528
            G R V PY+Y+F+T AK RW  R+++++F+ EFG N   YYE AI  G ++VN K +  D + KN D++ +  HRHEPPV+G ++P+V E  D IVV KP ++P HPCG+YR N+L  I+Q  RP+L  L + HRLDRLTSG+ + AK A +A  +   I   +  KTYLARV G F                                                                             P+ LD                          DV+        V    DN  +++    E      E +I +NCP+R L A+DGV+ECH EGK ++T+++ V  D    TS+++C PV GRTHQIRLHLQ +G PIANDPCYGG+LHFG+   R +  E+
Sbjct:   70 GYRMVEPYVYEFRTFAKARWFDRELLEIFTKEFGANSPEYYEFAIASGRISVNHKIVPADTIIKNGDLIIHTAHRHEPPVSGEEVPVVYEDDDLIVVSKPPSMPTHPCGAYRHNSLHTIVQATRPDLPQLNIVHRLDRLTSGVVLLAKNATKAKALSSIIADRQASKTYLARVRGQF-----------------------------------------------------------------------------PEVLDS-------------------------DVQAK-----LVKQAKDNCPASVITFPE------EGAILINCPLRCLSARDGVWECHEEGKSSETLVQLVRTD--KCTSLMKCKPVTGRTHQIRLHLQLIGFPIANDPCYGGELHFGESAERAKEIED 367          
BLAST of mRNA_F-serratus_M_contig927.20656.1 vs. uniprot
Match: A0A5D6Y583_9STRA (PseudoU_synth_2 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y583_9STRA)

HSP 1 Score: 251 bits (641), Expect = 6.280e-73
Identity = 152/407 (37.35%), Postives = 204/407 (50.12%), Query Frame = 0
Query:  117 GLRRVRPYIYDFQTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNCKSIDLDYVFKNNDVVCNRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPELS-LRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGKTRKTYLARVSGNFGQRLPPERRQAGSPSTFAESCSAPPTRASPSEAVASTDARGRTFLTPKTGEGNSSADRVIEDAGGTSSPSGSELAAIPKALDGPGELWWRYETPGERVVRGFQKEDGDDVRPNETVNGAVPNTGDNANSAIAILSEDDGGAEEISIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDFSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEAR 522
            G R V+PY+Y+F+THAKERW GR+++ +F+AEFG N   YY  AI+ G +TVN + +  D V  N D++ ++THRHEPPV+G +IPIV E  D +VV KP ++  HP G+YR+N+L  ILQ  RP+L  L + HRLDRLTSG+ + AK A +A  +   I   +  KTYLAR  G F                                                                             P AL           TP  ++               +T     P        A ++   D   A+E+ I  +CP+R + A++GVYECHAEGK ++TV+  V     S T V +C PV GRTHQIRLHLQ +G PIANDPCYGG+LHFG+ +AR
Sbjct:   62 GYRLVKPYVYEFRTHAKERWYGRELLAIFTAEFGANSPDYYRFAIQSGRITVNERIVGPDTVINNGDLIVHKTHRHEPPVSGEEIPIVHEDDDLLVVCKPPSITTHPSGAYRYNSLHLILQHMRPDLPPLHIVHRLDRLTSGIVLLAKNAAKAKELSLCIAERQASKTYLARARGCF-----------------------------------------------------------------------------PTAL-----------TPNAKLQLA------------QTAQAKCP--------ASSVTFTD---ADELVI--SCPLRCVSAREGVYECHAEGKPSETVVSLVRN--GSATCVFKCKPVTGRTHQIRLHLQLIGFPIANDPCYGGQLHFGESQAR 353          
BLAST of mRNA_F-serratus_M_contig927.20656.1 vs. uniprot
Match: A0A329RSN8_9STRA (PseudoU_synth_2 domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A329RSN8_9STRA)

HSP 1 Score: 249 bits (637), Expect = 3.430e-72
Identity = 148/412 (35.92%), Postives = 206/412 (50.00%), Query Frame = 0
Query:  117 GLRRVRPYIYDFQTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNCKSIDLDYVFKNNDVVCNRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGKTRKTYLARVSGNFGQRLPPERRQAGSPSTFAESCSAPPTRASPSEAVASTDARGRTFLTPKTGEGNSSADRVIEDAGGTSSPSGSELAAIPKALDGPGELWWRYETPGERVVRGFQKEDGDDVRPNETVNGAVPNTGDNANSAIAILSEDDGGAEEISIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDFSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARRRMEE 527
            G R V PY+Y+F+T+AK RW  R+++++F+ EFG N   YY+ AI  G ++VN K +  D + KN D++ +  HRHEPPV+G ++P+V E  D IVV KP ++P HPCG+YR N+L  I+Q  RP+L  L + HRLDRLTSG+ + AK + +A  +   I   +  KTYLARV G F   L  E +                                               D+++  A                                        KE                      N   +I++  D GA    I ++CP+R L A+DGV+ECH EGK ++T++R V  D    TS+++C PV GRTHQIRLHL+ +G PIANDPCYGG+LHFG  E+  R EE
Sbjct:   75 GYRMVEPYVYEFRTYAKARWFDRELLEIFTKEFGANSPEYYKFAIASGRISVNHKIVPADTIIKNGDLIIHAAHRHEPPVSGEEVPVVYEDDDLIVVSKPPSMPTHPCGAYRHNSLHTIVQATRPDLPQLNIVHRLDRLTSGVMLLAKNSAKAKALSSIIADRQASKTYLARVRGQFPDLLNSEIQ-----------------------------------------------DKLVNQA----------------------------------------KE----------------------NCPASIITFPDEGA----ILISCPLRCLSARDGVWECHEEGKPSETLVRLVRTD--KCTSLMKCKPVTGRTHQIRLHLRLIGFPIANDPCYGGELHFG--ESAERAEE 369          
BLAST of mRNA_F-serratus_M_contig927.20656.1 vs. uniprot
Match: A0A2D4BPM1_PYTIN (RNA pseudouridylate synthase, putative n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BPM1_PYTIN)

HSP 1 Score: 247 bits (630), Expect = 1.340e-70
Identity = 151/423 (35.70%), Postives = 210/423 (49.65%), Query Frame = 0
Query:  102 ALAQAEKCEYYHDDQGLRRVRPYIYDFQTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNCKSIDLDYVFKNNDVVCNRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGKTRKTYLARVSGNFGQRLPPERRQAGSPSTFAESCSAPPTRASPSEAVASTDARGRTFLTPKTGEGNSSADRVIEDAGGTSSPSGSELAAIPKALDGPGELWWRYETPGERVVRGFQKEDGDDVRPNETVNGAVPNTGDNANSAIAILSEDDGGAEEISIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDFSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARR 523
            A A A + +YY   +G R V PY+Y+F+T AKERW GR ++ +F+ EFG N   YY  AI  G +T+N + +  D V KN D+V ++ HRHEPPV+G ++          VV KP ++P HPCG+YR N+L  I+ R RP+L +L + HRLDRLTSG+ I AK+  +A  + + I   +  KTYLARV G+   +L    +Q                                               R++E A        +  AA                                                    S ++ L +DD GA+ I   V+CP+R L  +D V+ECHA+GKE+QT +R    D +  T+++EC P+ GRTHQIRLHLQ +G PIANDPCYGG+LHFG+   RR
Sbjct:  101 ANAAAAEPDYYFS-RGYRFVTPYVYEFRTFAKERWFGRTLLAMFTEEFGANSPEYYRAAIASGRITINNRIVSPDTVIKNRDLVVHKAHRHEPPVSGEEVXXXXXXXXXXVVAKPPSMPTHPCGAYRHNSLHTIVSRMRPDLPTLNIVHRLDRLTSGIVILAKSGAKAKALAQCISDREASKTYLARVRGHLPLQLDDAFKQ-----------------------------------------------RLVETAR-------ANCAA----------------------------------------------------SEVSFLQQDDDGADVI--HVSCPLRCLSPRDAVWECHADGKESQTRVRVRRLDGA--TTLVECKPITGRTHQIRLHLQLLGFPIANDPCYGGELHFGESADRR 412          
BLAST of mRNA_F-serratus_M_contig927.20656.1 vs. uniprot
Match: G4YVW7_PHYSP (PseudoU_synth_2 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YVW7_PHYSP)

HSP 1 Score: 244 bits (623), Expect = 1.800e-70
Identity = 140/409 (34.23%), Postives = 198/409 (48.41%), Query Frame = 0
Query:  117 GLRRVRPYIYDFQTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNCKSIDLDYVFKNNDVVCNRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGKTRKTYLARVSGNFGQRLPPERRQAGSPSTFAESCSAPPTRASPSEAVASTDARGRTFLTPKTGEGNSSADRVIEDAGGTSSPSGSELAAIPKALDGPGELWWRYETPGERVVRGFQKEDGDDVRPNETVNGAVPNTGDNANSAIAILSEDDGGAEEISIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDFSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARRR 524
            G R V PY+Y+F+T AK RW  R+++++F+ EFG N   YY+ AI  G ++VN K +  D V KN D++ +  HRHEPPV+G ++ +V E  D IVV KP ++P HPCG+YR N+L  I+Q  RP+L  L + HRLDRLTSG+ + AK A +A  +   I   +  K YLARV G F   L P  ++                                               +++  A                          +   P   +   F KE G                                      + ++CP+R L A+DGV+ECH EGK ++T+++ +  D    TS++EC P+ GRTHQIRLHLQ +G PIANDPCYGG+LHFG+   R +
Sbjct:   48 GYRMVEPYVYEFRTFAKARWFDRQLLEIFTKEFGANSPEYYKFAIASGRISVNHKIVPADTVIKNGDLIIHTAHRHEPPVSGEEVSVVYEDDDLIVVSKPPSMPTHPCGAYRHNSLHSIVQATRPDLPQLNIVHRLDRLTSGVVLLAKNAAKAKALSAIIANRQASKMYLARVRGQFPDLLDPAVQE-----------------------------------------------KLVSSA--------------------------KVTCPASEIS--FPKEGG--------------------------------------VLISCPLRCLSARDGVWECHEEGKSSETLVKLIRTD--KCTSLMECKPITGRTHQIRLHLQLIGFPIANDPCYGGELHFGESTERAK 341          
BLAST of mRNA_F-serratus_M_contig927.20656.1 vs. uniprot
Match: A0A024FZK7_9STRA (PseudoU_synth_2 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZK7_9STRA)

HSP 1 Score: 242 bits (618), Expect = 1.410e-69
Identity = 149/420 (35.48%), Postives = 197/420 (46.90%), Query Frame = 0
Query:  117 GLRRVRPYIYDFQTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNCKSIDLDYVFKNNDVVCNRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGKTRKTYLARVSGNFGQRLPPERRQAGSPSTFAESCSAPPTRASPSEAVASTDARGRTFLTPKTGEGNSSADRVIEDAGGTSSPSGSELAAIPKALDGPGELWWRYETPGERVVRGFQKEDGDDVRPNETVNGAVPNTGDNANSAIAILSEDDGGAEEISIRVNCPIRVLDAKDGVYECHAEGKEAQTVIR----KVAYDFSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFG-DPEARRRMEENPS 530
            G R V+PY+Y++Q  AKERW  R++ DV + EFG     YY+ A+R G +TVN   +   Y  +N D + +RTHRHEPPV+  +IP+V E  + +VV KPC++P HPCG+YR N+L  IL    PEL SL V HRLDRLTSG+ IFAK    A  +  ++   + RKTYLA V G+   +   E R+                                              D++ E                 +A D                                                  I    +    E  IRV CP+R L  K+GV+ECH +GKE++T+       V  +     SVL C PV GRTHQIRLHLQ +G PIANDPCYGGKLHFG +PE  + ++E  S
Sbjct:   54 GYRLVKPYVYEYQAFAKERWYKRELFDVLTTEFGAYTSQYYDVAVRSGRVTVNHSIVSPTYQIQNGDFIVHRTHRHEPPVSSDEIPVVHEDDELLVVSKPCSIPTHPCGAYRHNSLHSILLHLFPELKSLHVVHRLDRLTSGIVIFAKNGATAKKLSTEMTKRQVRKTYLAGVKGSIPFKWDEETRKRQ--------------------------------------------DKIKE-----------------RARD--------------------------------------------------ICDASEISFSEKQIRVKCPLRCLSHKNGVWECHKDGKESETIFELDQLTVPTENRGALSVLRCYPVTGRTHQIRLHLQLIGLPIANDPCYGGKLHFGVNPELSKTIDETKS 362          
BLAST of mRNA_F-serratus_M_contig927.20656.1 vs. uniprot
Match: A0A3R7JWT6_9STRA (PseudoU_synth_2 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JWT6_9STRA)

HSP 1 Score: 232 bits (592), Expect = 2.780e-66
Identity = 144/412 (34.95%), Postives = 198/412 (48.06%), Query Frame = 0
Query:  117 GLRRVRPYIYDFQTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNCKSIDLDYVFKNNDVVCNRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGKTRKTYLARVSGNFGQRLPPERRQAGSPSTFAESCSAPPTRASPSEAVASTDARGRTFLTPKTGEGNSSADRVIEDAGGTSSPSGSELAAIPKALDGPGELWWRYETPGERVVRGFQKEDGDDVRPNETVNGAVPNTGDNANSAIAILSEDDGGAEEISIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDFSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARRRMEE 527
            G R V PY+Y+F+T AK RW  R+++++F+ EFG     YY+ AI  G ++VN + +  D V KN D++ ++ HRHEPPV+G ++P+V E  D IVV KP ++P HPCG+YR+N+L  I+Q  RP+L  L + HRLDRLTS        AER           +  KTYLARV G F   L P                                                                     ++ + L G        E  G+                                S I    ED       +I ++CP+R L A+DGV+ECH +GK ++T++R V  D  + TS+++C PV GRTHQIRLHLQ +G PIANDPCYGG+LHFG  E+  R+EE
Sbjct:   40 GYRMVEPYVYEFRTFAKARWFDRELLEIFTKEFGAYSPEYYKFAISSGRISVNHQVVASDTVIKNGDLIIHKAHRHEPPVSGEEVPVVFEDDDLIVVSKPPSIPTHPCGAYRYNSLHSIVQANRPDLPQLNIVHRLDRLTS--------AER-----------QASKTYLARVRGKFPSALDP---------------------------------------------------------------------SVKEKLTG--------EAKGKCAA-----------------------------SLITYPEED-------AILISCPLRCLSARDGVWECHEDGKPSETLVRLVRAD--NGTSLMKCKPVTGRTHQIRLHLQLIGFPIANDPCYGGELHFG--ESAERIEE 315          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig927.20656.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB48_ECTSI5.830e-19354.06Pseudouridine synthase n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KK40_9PHAE1.070e-12756.38PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A8K1CHM9_PYTOL3.020e-7436.39Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2P4WXF4_9STRA5.310e-7435.84RNA pseudouridylate synthase n=1 Tax=Phytophthora ... [more]
A0A5D6Y583_9STRA6.280e-7337.35PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A329RSN8_9STRA3.430e-7235.92PseudoU_synth_2 domain-containing protein n=9 Tax=... [more]
A0A2D4BPM1_PYTIN1.340e-7035.70RNA pseudouridylate synthase, putative n=2 Tax=Pyt... [more]
G4YVW7_PHYSP1.800e-7034.23PseudoU_synth_2 domain-containing protein n=4 Tax=... [more]
A0A024FZK7_9STRA1.410e-6935.48PseudoU_synth_2 domain-containing protein n=1 Tax=... [more]
A0A3R7JWT6_9STRA2.780e-6634.95PseudoU_synth_2 domain-containing protein n=3 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 211..499
e-value: 2.0E-23
score: 83.3
NoneNo IPR availableGENE3D3.30.2350.10coord: 406..533
e-value: 8.8E-19
score: 69.8
NoneNo IPR availableGENE3D3.30.2350.10coord: 201..338
e-value: 7.0E-22
score: 80.0
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 85..653
NoneNo IPR availablePANTHERPTHR21600:SF40RNA PSEUDOURIDYLATE SYNTHASE DOMAIN-CONTAINING PROTEIN 2coord: 85..653
IPR002942RNA-binding S4 domainPROSITEPS50889S4coord: 140..208
score: 8.585
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 201..514

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig927contigF-serratus_M_contig927:102461..109964 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig927.20656.1mRNA_F-serratus_M_contig927.20656.1Fucus serratus malemRNAF-serratus_M_contig927 102461..109964 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig927.20656.1 ID=prot_F-serratus_M_contig927.20656.1|Name=mRNA_F-serratus_M_contig927.20656.1|organism=Fucus serratus male|type=polypeptide|length=656bp
VNRGAQYPDRRTALTRFIGMEETCGSIEPPLPGSVEKGSAAAAATVTVYD
DTRRLESRKPGSSPPHKTRRFDTGSVDKQRSEKGHSKRRRKGDAKRARKE
RALAQAEKCEYYHDDQGLRRVRPYIYDFQTHAKERWLGRKVIDVFSAEFG
GNPRSYYEQAIRCGLLTVNCKSIDLDYVFKNNDVVCNRTHRHEPPVAGGD
IPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPELSLRVCHR
LDRLTSGLTIFAKTAERAGVIQKQIGAGKTRKTYLARVSGNFGQRLPPER
RQAGSPSTFAESCSAPPTRASPSEAVASTDARGRTFLTPKTGEGNSSADR
VIEDAGGTSSPSGSELAAIPKALDGPGELWWRYETPGERVVRGFQKEDGD
DVRPNETVNGAVPNTGDNANSAIAILSEDDGGAEEISIRVNCPIRVLDAK
DGVYECHAEGKEAQTVIRKVAYDFSSDTSVLECTPVHGRTHQIRLHLQWV
GHPIANDPCYGGKLHFGDPEARRRMEENPSLGGWKGTKPTTATTTATTTA
AIPGKREGAECSSQENSIMANMENAHGRSAAAVEGALHSPKDNSTPEAKL
GNAHGGVTVHQGKPGSEGGSTVEGNVTANRDEQDDEAFVGFDWVFETKMP
AWATF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006145PsdUridine_synth_RsuA/RluA
IPR002942S4_RNA-bd
IPR020103PsdUridine_synth_cat_dom_sf