mRNA_F-serratus_M_contig927.20656.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig927.20656.1 vs. uniprot
Match: D8LB48_ECTSI (Pseudouridine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB48_ECTSI) HSP 1 Score: 566 bits (1460), Expect = 5.830e-193 Identity = 313/579 (54.06%), Postives = 374/579 (64.59%), Query Frame = 1
Query: 238 RSEKGHSKRRRXXXXXXXRKERALAQA-EKCEYYHDDQGLRRVRPYIYDFQTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNCKSIDLDYVFKNNDVVCNRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPELSLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGKTRKTYLARVSGNFGQRLPPERRQAGSPSTFAESCSAPPTRASPSEAVASTDARGRTFLTPKTGEGNSSADRVIEDAGGTSSPSGSELAAIPKALDGPGELWWRYETPGERVVRGFQKEDGDDVRPNETVNGAVPNTGDNANSAIAILSEDDGGAEE-ISIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDFSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARRRMEENPSL-GGWKGTKPTTATXXXXXXAAIPGKREGAECSSQENSIMANMENAHGRSAAAVEGALHSPKDNSTPEAKLGNAHGGVTVHQGKPGSEGGSTVEGN-VTANRDEQDDEAFVGFDWVFETKMPAWAT 1962
R + G KR R RK++ALA A EKCEYY DD GLRRVRPYIYDFQTHAKERWLGR V+DVFSAEFGG RS+YE A+R GLLTVN + +DY +N+D++CN+THRHEPPV GGDIPIVSESA+E+VVDKPCTVPIHPCGSYRFNTLFYI+ RQRP+L+LRVCHRLDRLTSGLTIFAKTAERAGVIQKQIG+G+TRKTYLARVSG+FGQRLP +RR+ GSPS ELWWRYE+ GE VV+G +R + ++G +++ S+ + S GG +E +++RVNCPIRVLD K GVYECH GKEAQTV+RKV YD +SDTSV+ECTPVHGRTHQIRLHLQW GHPIANDPCYGG+LHFG+PEA+RR EENP L GGWKG + +T + G+ E + + E + A ME AVEG P+A +G G+ + + GG G+ V R+ +DDE F+G DW FETKMP+WAT
Sbjct: 51 RGDDGRGKRPRKGDAKRERKKKALAHAAEKCEYYVDDHGLRRVRPYIYDFQTHAKERWLGRTVVDVFSAEFGGEARSHYENAVRGGLLTVNGNKVGVDYELQNSDLICNKTHRHEPPVCGGDIPIVSESAEELVVDKPCTVPIHPCGSYRFNTLFYIMHRQRPDLTLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGSGRTRKTYLARVSGDFGQRLPLDRRKQGSPSXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATDELWWRYESLGEGVVKGR-------LRSSGAISGEEGGLAESSASSGGVGSGGAGGEKEGVTVRVNCPIRVLDPKHGVYECHPSGKEAQTVVRKVGYDTASDTSVVECTPVHGRTHQIRLHLQWAGHPIANDPCYGGELHFGNPEAKRRAEENPDLEGGWKGVPGSNSTAAAGRGSM--GENEARQPRTSEAADGAGMEVDGDSGDWAVEGD-GGRGGGGAPDAVVGAPDAGIAGASVEEAAVGGVVSSGDGVEGQREGEDDEKFMGPDWAFETKMPSWAT 614
BLAST of mRNA_F-serratus_M_contig927.20656.1 vs. uniprot
Match: A0A6H5KK40_9PHAE (PseudoU_synth_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK40_9PHAE) HSP 1 Score: 393 bits (1009), Expect = 1.070e-127 Identity = 221/392 (56.38%), Postives = 253/392 (64.54%), Query Frame = 1
Query: 238 RSEKGHSKRRRXXXXXXXRKERALAQA-EKCEYYHDDQGLRRVRPYIYDFQTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNCKSIDLDYVFKNNDVVCNRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPELSLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGKTRKTYLARVSGNFGQRLPPERRQAGSPSTFAESCSAPPTRASPSEAVASTDARGRTFLTPKTGEGNSSADRVIEDAGGTSSPSGSELAAIPKALDGPGELWWRYETPGERVVRGFQKEDGDDVRPNETVNGAVPNTGDNANSAIAILSEDDGGA----EEISIRVNCPIRVLDAKDGVYECHAEGKEAQTV 1398
R + G KR R RK++ALA A EKCEYY D GLRRVRPYIY+FQTHAKERWLGR V+DVFSAEFGG PRS+YE AIR GLLTVN + +DY +N+D++CNRTHRHEPPV GGDIPIV ESA+E+VVDKPCTVPIHPCGSYRFNTLFYI+ RQRP+L+LRVCHRLDRLTSGLTIFAKTAERAGVIQKQIG G+TRKTYLARVSG+FGQRLP +RR+ GSPS ELWWRYE+ GE VV+G +R + V+G G A S+++ GGA E +++RVNCPIRVLD K GVYECH GKEAQTV
Sbjct: 31 RGDDGRGKRPRKGDAKRERKKKALAHASEKCEYYVDGHGLRRVRPYIYNFQTHAKERWLGRTVVDVFSAEFGGEPRSHYENAIRGGLLTVNGNKVGVDYELQNSDLICNRTHRHEPPVCGGDIPIVFESAEELVVDKPCTVPIHPCGSYRFNTLFYIMHRQRPDLTLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGLGRTRKTYLARVSGDFGQRLPLDRRKQGSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXADELWWRYESLGEGVVKGR-------LRSSGAVSGEE---GGLAESSVSSGRAGGGGAGGEKEGVTVRVNCPIRVLDPKHGVYECHPSGKEAQTV 406
BLAST of mRNA_F-serratus_M_contig927.20656.1 vs. uniprot
Match: A0A8K1CHM9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHM9_PYTOL) HSP 1 Score: 256 bits (653), Expect = 3.020e-74 Identity = 151/415 (36.39%), Postives = 208/415 (50.12%), Query Frame = 1
Query: 328 EYYHDDQGLRRVRPYIYDFQTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNCKSIDLDYVFKNNDVVCNRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGKTRKTYLARVSGNFGQRLPPERRQAGSPSTFAESCSAPPTRASPSEAVASTDARGRTFLTPKTGEGNSSADRVIEDAGGTSSPSGSELAAIPKALDGPGELWWRYETPGERVVRGFQKEDGDDVRPNETVNGAVPNTGDNANSAIAILSEDDGGAEEISIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDFSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARR 1569
EY+ +D G R V+PY+Y+++T+AKERWLGR +I +F+ EFG N YY+ AI+ G +TVN K + + + KN D++ ++ HRHEPPV G ++PI E D +VV KP ++P HPCG+YR N+L I+ R RP+L L + HRLDRLTSG+ I AK+ +A + + I + KTYLARV G+ P+EA DD + V A N +A I DD +I ++CP+R L +D V+ECH EGKE+QT +R + D T+++EC P+ GRTHQIRLHLQ +G PIANDPCYGG+LHFG+ RR
Sbjct: 86 EYFFED-GYRFVKPYLYEYRTYAKERWLGRPLISMFTEEFGANSPEYYQAAIQSGRITVNDKIVTPETIIKNRDLILHKAHRHEPPVIGEEVPIAYEDDDLLVVVKPSSMPTHPCGAYRHNSLHTIVHRMRPDLPQLNIVHRLDRLTSGIVILAKSGVKAKALSQCISDREASKTYLARVRGHL-----------------------------PTEAF-------------------------------------------------------------------------DDAFKQQLVATAAKNC-----AASEITFPDDQ-----TIHISCPLRCLSQRDAVWECHEEGKESQTRVRVLRID--QQTTLVECKPITGRTHQIRLHLQLLGFPIANDPCYGGELHFGESSERR 385
BLAST of mRNA_F-serratus_M_contig927.20656.1 vs. uniprot
Match: A0A2P4WXF4_9STRA (RNA pseudouridylate synthase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WXF4_9STRA) HSP 1 Score: 254 bits (649), Expect = 5.310e-74 Identity = 148/413 (35.84%), Postives = 203/413 (49.15%), Query Frame = 1
Query: 349 GLRRVRPYIYDFQTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNCKSIDLDYVFKNNDVVCNRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGKTRKTYLARVSGNFGQRLPPERRQAGSPSTFAESCSAPPTRASPSEAVASTDARGRTFLTPKTGEGNSSADRVIEDAGGTSSPSGSELAAIPKALDGPGELWWRYETPGERVVRGFQKEDGDDVRPNETVNGAVPNTGDNANSAIAILSEDDGGAEEISIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDFSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARRRMEEN 1584
G R V PY+Y+F+T AK RW R+++++F+ EFG N YYE AI G ++VN K + D + KN D++ + HRHEPPV+G ++P+V E D IVV KP ++P HPCG+YR N+L I+Q RP+L L + HRLDRLTSG+ + AK A +A + I + KTYLARV G F P+ LD DV+ V DN +++ E E +I +NCP+R L A+DGV+ECH EGK ++T+++ V D TS+++C PV GRTHQIRLHLQ +G PIANDPCYGG+LHFG+ R + E+
Sbjct: 70 GYRMVEPYVYEFRTFAKARWFDRELLEIFTKEFGANSPEYYEFAIASGRISVNHKIVPADTIIKNGDLIIHTAHRHEPPVSGEEVPVVYEDDDLIVVSKPPSMPTHPCGAYRHNSLHTIVQATRPDLPQLNIVHRLDRLTSGVVLLAKNATKAKALSSIIADRQASKTYLARVRGQF-----------------------------------------------------------------------------PEVLDS-------------------------DVQAK-----LVKQAKDNCPASVITFPE------EGAILINCPLRCLSARDGVWECHEEGKSSETLVQLVRTD--KCTSLMKCKPVTGRTHQIRLHLQLIGFPIANDPCYGGELHFGESAERAKEIED 367
BLAST of mRNA_F-serratus_M_contig927.20656.1 vs. uniprot
Match: A0A5D6Y583_9STRA (PseudoU_synth_2 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y583_9STRA) HSP 1 Score: 251 bits (641), Expect = 6.280e-73 Identity = 152/407 (37.35%), Postives = 204/407 (50.12%), Query Frame = 1
Query: 349 GLRRVRPYIYDFQTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNCKSIDLDYVFKNNDVVCNRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPELS-LRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGKTRKTYLARVSGNFGQRLPPERRQAGSPSTFAESCSAPPTRASPSEAVASTDARGRTFLTPKTGEGNSSADRVIEDAGGTSSPSGSELAAIPKALDGPGELWWRYETPGERVVRGFQKEDGDDVRPNETVNGAVPNTGDNANSAIAILSEDDGGAEEISIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDFSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEAR 1566
G R V+PY+Y+F+THAKERW GR+++ +F+AEFG N YY AI+ G +TVN + + D V N D++ ++THRHEPPV+G +IPIV E D +VV KP ++ HP G+YR+N+L ILQ RP+L L + HRLDRLTSG+ + AK A +A + I + KTYLAR G F P AL TP ++ +T P A ++ D A+E+ I +CP+R + A++GVYECHAEGK ++TV+ V S T V +C PV GRTHQIRLHLQ +G PIANDPCYGG+LHFG+ +AR
Sbjct: 62 GYRLVKPYVYEFRTHAKERWYGRELLAIFTAEFGANSPDYYRFAIQSGRITVNERIVGPDTVINNGDLIVHKTHRHEPPVSGEEIPIVHEDDDLLVVCKPPSITTHPSGAYRYNSLHLILQHMRPDLPPLHIVHRLDRLTSGIVLLAKNAAKAKELSLCIAERQASKTYLARARGCF-----------------------------------------------------------------------------PTAL-----------TPNAKLQLA------------QTAQAKCP--------ASSVTFTD---ADELVI--SCPLRCVSAREGVYECHAEGKPSETVVSLVRN--GSATCVFKCKPVTGRTHQIRLHLQLIGFPIANDPCYGGQLHFGESQAR 353
BLAST of mRNA_F-serratus_M_contig927.20656.1 vs. uniprot
Match: A0A329RSN8_9STRA (PseudoU_synth_2 domain-containing protein n=9 Tax=Phytophthora TaxID=4783 RepID=A0A329RSN8_9STRA) HSP 1 Score: 249 bits (637), Expect = 3.430e-72 Identity = 148/412 (35.92%), Postives = 206/412 (50.00%), Query Frame = 1
Query: 349 GLRRVRPYIYDFQTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNCKSIDLDYVFKNNDVVCNRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGKTRKTYLARVSGNFGQRLPPERRQAGSPSTFAESCSAPPTRASPSEAVASTDARGRTFLTPKTGEGNSSADRVIEDAGGTSSPSGSELAAIPKALDGPGELWWRYETPGERVVRGFQKEDGDDVRPNETVNGAVPNTGDNANSAIAILSEDDGGAEEISIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDFSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARRRMEE 1581
G R V PY+Y+F+T+AK RW R+++++F+ EFG N YY+ AI G ++VN K + D + KN D++ + HRHEPPV+G ++P+V E D IVV KP ++P HPCG+YR N+L I+Q RP+L L + HRLDRLTSG+ + AK + +A + I + KTYLARV G F L E + D+++ A KE N +I++ D GA I ++CP+R L A+DGV+ECH EGK ++T++R V D TS+++C PV GRTHQIRLHL+ +G PIANDPCYGG+LHFG E+ R EE
Sbjct: 75 GYRMVEPYVYEFRTYAKARWFDRELLEIFTKEFGANSPEYYKFAIASGRISVNHKIVPADTIIKNGDLIIHAAHRHEPPVSGEEVPVVYEDDDLIVVSKPPSMPTHPCGAYRHNSLHTIVQATRPDLPQLNIVHRLDRLTSGVMLLAKNSAKAKALSSIIADRQASKTYLARVRGQFPDLLNSEIQ-----------------------------------------------DKLVNQA----------------------------------------KE----------------------NCPASIITFPDEGA----ILISCPLRCLSARDGVWECHEEGKPSETLVRLVRTD--KCTSLMKCKPVTGRTHQIRLHLRLIGFPIANDPCYGGELHFG--ESAERAEE 369
BLAST of mRNA_F-serratus_M_contig927.20656.1 vs. uniprot
Match: A0A2D4BPM1_PYTIN (RNA pseudouridylate synthase, putative n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BPM1_PYTIN) HSP 1 Score: 247 bits (630), Expect = 1.340e-70 Identity = 151/423 (35.70%), Postives = 210/423 (49.65%), Query Frame = 1
Query: 304 ALAQAEKCEYYHDDQGLRRVRPYIYDFQTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNCKSIDLDYVFKNNDVVCNRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGKTRKTYLARVSGNFGQRLPPERRQAGSPSTFAESCSAPPTRASPSEAVASTDARGRTFLTPKTGEGNSSADRVIEDAGGTSSPSGSELAAIPKALDGPGELWWRYETPGERVVRGFQKEDGDDVRPNETVNGAVPNTGDNANSAIAILSEDDGGAEEISIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDFSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARR 1569
A A A + +YY +G R V PY+Y+F+T AKERW GR ++ +F+ EFG N YY AI G +T+N + + D V KN D+V ++ HRHEPPV+G ++ VV KP ++P HPCG+YR N+L I+ R RP+L +L + HRLDRLTSG+ I AK+ +A + + I + KTYLARV G+ +L +Q R++E A + AA S ++ L +DD GA+ I V+CP+R L +D V+ECHA+GKE+QT +R D + T+++EC P+ GRTHQIRLHLQ +G PIANDPCYGG+LHFG+ RR
Sbjct: 101 ANAAAAEPDYYFS-RGYRFVTPYVYEFRTFAKERWFGRTLLAMFTEEFGANSPEYYRAAIASGRITINNRIVSPDTVIKNRDLVVHKAHRHEPPVSGEEVXXXXXXXXXXVVAKPPSMPTHPCGAYRHNSLHTIVSRMRPDLPTLNIVHRLDRLTSGIVILAKSGAKAKALAQCISDREASKTYLARVRGHLPLQLDDAFKQ-----------------------------------------------RLVETAR-------ANCAA----------------------------------------------------SEVSFLQQDDDGADVI--HVSCPLRCLSPRDAVWECHADGKESQTRVRVRRLDGA--TTLVECKPITGRTHQIRLHLQLLGFPIANDPCYGGELHFGESADRR 412
BLAST of mRNA_F-serratus_M_contig927.20656.1 vs. uniprot
Match: G4YVW7_PHYSP (PseudoU_synth_2 domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4YVW7_PHYSP) HSP 1 Score: 244 bits (623), Expect = 1.800e-70 Identity = 140/409 (34.23%), Postives = 198/409 (48.41%), Query Frame = 1
Query: 349 GLRRVRPYIYDFQTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNCKSIDLDYVFKNNDVVCNRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGKTRKTYLARVSGNFGQRLPPERRQAGSPSTFAESCSAPPTRASPSEAVASTDARGRTFLTPKTGEGNSSADRVIEDAGGTSSPSGSELAAIPKALDGPGELWWRYETPGERVVRGFQKEDGDDVRPNETVNGAVPNTGDNANSAIAILSEDDGGAEEISIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDFSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARRR 1572
G R V PY+Y+F+T AK RW R+++++F+ EFG N YY+ AI G ++VN K + D V KN D++ + HRHEPPV+G ++ +V E D IVV KP ++P HPCG+YR N+L I+Q RP+L L + HRLDRLTSG+ + AK A +A + I + K YLARV G F L P ++ +++ A + P + F KE G + ++CP+R L A+DGV+ECH EGK ++T+++ + D TS++EC P+ GRTHQIRLHLQ +G PIANDPCYGG+LHFG+ R +
Sbjct: 48 GYRMVEPYVYEFRTFAKARWFDRQLLEIFTKEFGANSPEYYKFAIASGRISVNHKIVPADTVIKNGDLIIHTAHRHEPPVSGEEVSVVYEDDDLIVVSKPPSMPTHPCGAYRHNSLHSIVQATRPDLPQLNIVHRLDRLTSGVVLLAKNAAKAKALSAIIANRQASKMYLARVRGQFPDLLDPAVQE-----------------------------------------------KLVSSA--------------------------KVTCPASEIS--FPKEGG--------------------------------------VLISCPLRCLSARDGVWECHEEGKSSETLVKLIRTD--KCTSLMECKPITGRTHQIRLHLQLIGFPIANDPCYGGELHFGESTERAK 341
BLAST of mRNA_F-serratus_M_contig927.20656.1 vs. uniprot
Match: A0A024FZK7_9STRA (PseudoU_synth_2 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZK7_9STRA) HSP 1 Score: 242 bits (618), Expect = 1.410e-69 Identity = 149/420 (35.48%), Postives = 197/420 (46.90%), Query Frame = 1
Query: 349 GLRRVRPYIYDFQTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNCKSIDLDYVFKNNDVVCNRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGKTRKTYLARVSGNFGQRLPPERRQAGSPSTFAESCSAPPTRASPSEAVASTDARGRTFLTPKTGEGNSSADRVIEDAGGTSSPSGSELAAIPKALDGPGELWWRYETPGERVVRGFQKEDGDDVRPNETVNGAVPNTGDNANSAIAILSEDDGGAEEISIRVNCPIRVLDAKDGVYECHAEGKEAQTVIR----KVAYDFSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFG-DPEARRRMEENPS 1590
G R V+PY+Y++Q AKERW R++ DV + EFG YY+ A+R G +TVN + Y +N D + +RTHRHEPPV+ +IP+V E + +VV KPC++P HPCG+YR N+L IL PEL SL V HRLDRLTSG+ IFAK A + ++ + RKTYLA V G+ + E R+ D++ E +A D I + E IRV CP+R L K+GV+ECH +GKE++T+ V + SVL C PV GRTHQIRLHLQ +G PIANDPCYGGKLHFG +PE + ++E S
Sbjct: 54 GYRLVKPYVYEYQAFAKERWYKRELFDVLTTEFGAYTSQYYDVAVRSGRVTVNHSIVSPTYQIQNGDFIVHRTHRHEPPVSSDEIPVVHEDDELLVVSKPCSIPTHPCGAYRHNSLHSILLHLFPELKSLHVVHRLDRLTSGIVIFAKNGATAKKLSTEMTKRQVRKTYLAGVKGSIPFKWDEETRKRQ--------------------------------------------DKIKE-----------------RARD--------------------------------------------------ICDASEISFSEKQIRVKCPLRCLSHKNGVWECHKDGKESETIFELDQLTVPTENRGALSVLRCYPVTGRTHQIRLHLQLIGLPIANDPCYGGKLHFGVNPELSKTIDETKS 362
BLAST of mRNA_F-serratus_M_contig927.20656.1 vs. uniprot
Match: A0A3R7JWT6_9STRA (PseudoU_synth_2 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JWT6_9STRA) HSP 1 Score: 232 bits (592), Expect = 2.780e-66 Identity = 144/412 (34.95%), Postives = 198/412 (48.06%), Query Frame = 1
Query: 349 GLRRVRPYIYDFQTHAKERWLGRKVIDVFSAEFGGNPRSYYEQAIRCGLLTVNCKSIDLDYVFKNNDVVCNRTHRHEPPVAGGDIPIVSESADEIVVDKPCTVPIHPCGSYRFNTLFYILQRQRPEL-SLRVCHRLDRLTSGLTIFAKTAERAGVIQKQIGAGKTRKTYLARVSGNFGQRLPPERRQAGSPSTFAESCSAPPTRASPSEAVASTDARGRTFLTPKTGEGNSSADRVIEDAGGTSSPSGSELAAIPKALDGPGELWWRYETPGERVVRGFQKEDGDDVRPNETVNGAVPNTGDNANSAIAILSEDDGGAEEISIRVNCPIRVLDAKDGVYECHAEGKEAQTVIRKVAYDFSSDTSVLECTPVHGRTHQIRLHLQWVGHPIANDPCYGGKLHFGDPEARRRMEE 1581
G R V PY+Y+F+T AK RW R+++++F+ EFG YY+ AI G ++VN + + D V KN D++ ++ HRHEPPV+G ++P+V E D IVV KP ++P HPCG+YR+N+L I+Q RP+L L + HRLDRLTS AER + KTYLARV G F L P ++ + L G E G+ S I ED +I ++CP+R L A+DGV+ECH +GK ++T++R V D + TS+++C PV GRTHQIRLHLQ +G PIANDPCYGG+LHFG E+ R+EE
Sbjct: 40 GYRMVEPYVYEFRTFAKARWFDRELLEIFTKEFGAYSPEYYKFAISSGRISVNHQVVASDTVIKNGDLIIHKAHRHEPPVSGEEVPVVFEDDDLIVVSKPPSIPTHPCGAYRYNSLHSIVQANRPDLPQLNIVHRLDRLTS--------AER-----------QASKTYLARVRGKFPSALDP---------------------------------------------------------------------SVKEKLTG--------EAKGKCAA-----------------------------SLITYPEED-------AILISCPLRCLSARDGVWECHEDGKPSETLVRLVRAD--NGTSLMKCKPVTGRTHQIRLHLQLIGFPIANDPCYGGELHFG--ESAERIEE 315 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig927.20656.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig927.20656.1 >prot_F-serratus_M_contig927.20656.1 ID=prot_F-serratus_M_contig927.20656.1|Name=mRNA_F-serratus_M_contig927.20656.1|organism=Fucus serratus male|type=polypeptide|length=656bp VNRGAQYPDRRTALTRFIGMEETCGSIEPPLPGSVEKGSAAAAATVTVYDback to top mRNA from alignment at F-serratus_M_contig927:102461..109964- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig927.20656.1 ID=mRNA_F-serratus_M_contig927.20656.1|Name=mRNA_F-serratus_M_contig927.20656.1|organism=Fucus serratus male|type=mRNA|length=7504bp|location=Sequence derived from alignment at F-serratus_M_contig927:102461..109964- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig927:102461..109964- >mRNA_F-serratus_M_contig927.20656.1 ID=mRNA_F-serratus_M_contig927.20656.1|Name=mRNA_F-serratus_M_contig927.20656.1|organism=Fucus serratus male|type=CDS|length=3936bp|location=Sequence derived from alignment at F-serratus_M_contig927:102461..109964- (Fucus serratus male)back to top |