mRNA_F-serratus_M_contig909.20492.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig909.20492.1
Unique NamemRNA_F-serratus_M_contig909.20492.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig909.20492.1 vs. uniprot
Match: D7G084_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G084_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 1.600e-30
Identity = 113/297 (38.05%), Postives = 153/297 (51.52%), Query Frame = 2
Query:  179 RLADYMDMTPSVDINALNETRGSTGASSEASGSGRRARVPSRKALEASGKLKNEGIQWLTKEKKEEEAKRMKELKAQRKAAAAAGLKAGQVIEAMAI---------NGMGGGISAYTSGSGDEVETLSGLPKMAWRKLSPAEIMEAARREPITNVATKPPYRGSGPAASEEKDASHRTTGNR-----LVDTDAGSPDKYNQEVVSESYDTVWMESAKASPDRSQDSKRQRGSLGVHEQAMLVHARGVLPWNSSREAIVGDGRSLSGSGQIGSVSV-CQFEGCSRKATFGVNGNVRYC 1024
            R A    + PS D+  L   R S  A  EASGSGRRARVPSRK LEASGK+  E  QW+TKEKKEE+A+  K  +AQRKAAAAAGLK G+VIEA A           G+G G ++   G        S + K +WRKL+P EI+ AA ++P    A     RG+  A +E  D   +  G +     +V    G  ++   E ++   +    E      D +  +    GSL  H++  + H+      ++S E+  G  R      Q  +V V C+ + CSR A FGV+G VRYC
Sbjct:  416 RTAGQSALAPSDDMRLLQSARQS--AHEEASGSGRRARVPSRKVLEASGKMAGETAQWMTKEKKEEQARINKRFRAQRKAAAAAGLKIGEVIEATASPAPRAESEEEGLGSGGTSIRGGG-------SPVSKASWRKLTPTEILPAAGKKPSAEGAASE-VRGNDAAMAETTD--EQVVGKQPETAPVVSDGGGRSERKPAETMASGAEMSSQE------DSTTTNAFNEGSLKHHKKNQVEHS------SASSESEKGRYRVQQAGRQTSAVKVVCELDSCSRTAKFGVHGIVRYC 688          
BLAST of mRNA_F-serratus_M_contig909.20492.1 vs. uniprot
Match: A0A6H5KHQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ6_9PHAE)

HSP 1 Score: 125 bits (315), Expect = 1.050e-28
Identity = 109/291 (37.46%), Postives = 150/291 (51.55%), Query Frame = 2
Query:  179 RLADYMDMTPSVDINALNETRGSTGASSEASGSGRRARVPSRKALEASGKLKNEGIQWLTKEKKEEEAKRMKELKAQRKAAAAAGLKAGQVIEAMAI---------NGMGGGISAYTSGSGDEVETLSGLPKMAWRKLSPAEIMEAARREPITNVATKPPYRGSGPAASEEKDASHRTTGNRLVDTDAGSPDKYNQE-VVSESYDTVWMESAKASPDRSQDSKRQRGSLGVHEQAMLVHARGVLPWNSSREAIVGDGRSLSGSGQIGSVSVCQFEGCSRKATFGVNGNVRY 1021
            R A    + PS D+  L   R S  A  EASGSGRRARVPSRK LEA+GK+ +E  QW+TKEKKEE+A+  K+ +AQRKAA AAG K G+VIEA A          +G+G G ++   G        S +  ++WRKL+P EI+ AA ++P    A     RGS  A +E  D      G +   T   S D    E   +E+  +    SA+A+ +   +S     SL  H++  + H+      +  R  +   GR  S        ++C+   CSR A FGV+G VRY
Sbjct:  128 RTAGQSALAPSDDMRLLRNARQS--AHEEASGSGRRARVPSRKVLEAAGKMADETAQWMTKEKKEEQARINKKFRAQRKAAVAAGPKIGEVIEATASPSPRVESEEDGLGSGATSIRGGR-------SPVSNVSWRKLTPTEILLAAGKKPFVEGAASE-VRGSDAAMAEMMD--EHVVGKQPEQTPVASEDGDRSERKPAETTASDAEMSAQATSNAFTES-----SLEHHKKNQVEHSSAPSESDKGRYRVQQAGRQASAV-----KAICELNSCSRTAKFGVHGIVRY 396          
BLAST of mRNA_F-serratus_M_contig909.20492.1 vs. uniprot
Match: A0A6H5K6U1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K6U1_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 3.770e-24
Identity = 84/197 (42.64%), Postives = 107/197 (54.31%), Query Frame = 2
Query:  182 LADYMDMTPSVDINALNETRGSTGASSEASGSGRRARVPSRKALEASGKLKNEGIQWLTKEKKEEEAKRMKELKAQRKAAAAAGLKAGQVIEAMAINGMGGGISAYTSGSGDEVETLSGLPKMAWRKLSPAEIMEAARREPITNVATKP-----PYRGSGPAASEEKDASHRTTGNRLVDTDAGSPDKYNQEVVSES 757
            +A+     PS ++  L E R S  A++EASG GRRAR PSRK LEASGK+  E  QW+T+EKKEE+A+   +LK QRKAAAAAGLK G+VIEA    G GG          D +   +     +WRKL+PAEI++AA +      A K        +G+      E  A+   TG RL      S      EV SES
Sbjct:    1 MAEAPGFPPSDEMRLLQEARDSARAAAEASGYGRRARAPSRKFLEASGKIVGESAQWMTREKKEEQARLSLQLKEQRKAAAAAGLKPGEVIEAATAAGAGG----------DGIRGENAPWNGSWRKLTPAEILQAAGKTAGVGKARKSLPGSTDTKGATTEKQREGPATEADTGRRLAKRRGSSA----SEVASES 183          
BLAST of mRNA_F-serratus_M_contig909.20492.1 vs. uniprot
Match: A0A6H5L640_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L640_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 4.700e-16
Identity = 66/172 (38.37%), Postives = 94/172 (54.65%), Query Frame = 2
Query:  140 ALPQPRSGHLTS------SRLADYMDMTPSVDINALNETRGSTGASSEASGSGRRARVPSRKALEASGKLKNEGIQWLTKEKKEEEAKRMKELKAQRKAAAAAGLKAGQVIEAMAI---------NGMGGGISAYTSGSGDEVETLSGLPKMAWRKLSPAEIMEAARREPIT 610
            +LP P S   T       +R  D   M PSV+ + L + R +    +  SG GRR R PSR+ALEASG+LK++G QW+T+E+K EEA+   EL+ QR+   AAG K+G V+EA            +G+GGG++    G G         P  AW+K+SP  +  +A +E  T
Sbjct:  103 SLPSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAXSGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARIKAELREQRRQYKAAGFKSGVVLEAFVAKAAGTGTVGDGVGGGVAGKI-GVGSATTKHGRDP--AWQKVSPEMLAASAEQEQAT 271          
BLAST of mRNA_F-serratus_M_contig909.20492.1 vs. uniprot
Match: A0A6H5LLY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLY6_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 6.950e-16
Identity = 82/219 (37.44%), Postives = 107/219 (48.86%), Query Frame = 2
Query:   26 SGGSQERRARASTSMSTSTKEVVTSFKTGDPSTSDSAGALP--QPRSGHLTSSRLADYMDMTPSVDINALNETRGSTGASSEASGSGRRARVPSRKALEASGKLKNEGIQWLTKEKKEEEAKRMKELKAQRKAAAAAGLKAGQVIE-----AMAINGMGGGIS---AYTSGSGDEVETLSGLPKMAWRKLSPAEIMEAA--------RREPITNVATKP 628
            SGG  ER A    S ST T E +T   T  P+ S      P  +P+     ++RLAD   M PSV+   L + R      +EASG GRR R PSR+ALEA+G+LK  G QW+++EKK E+ +   EL+ QRK   AAGLK+G V+E     A      G GI        G G     +   P   W+K+SP  +  A+        RRE       KP
Sbjct:  403 SGGKDERGA---ISSSTVTGENLTKT-TAKPAASSLPSPAPAAEPKPPSFPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRLQRKRYQAAGLKSGVVLEMFVPAATGTEAAGDGIEERDGEVRGEGGATTPIGSNP--GWQKVSPETLSAASPKQHSTGQRRESSVGTGQKP 615          
BLAST of mRNA_F-serratus_M_contig909.20492.1 vs. uniprot
Match: D8LEM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEM4_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 1.080e-15
Identity = 62/150 (41.33%), Postives = 85/150 (56.67%), Query Frame = 2
Query:  179 RLADYMDMTPSVDINALNETRGSTGASSEASGSGRRARVPSRKALEASGKLKNEGIQWLTKEKKEEEAKRMKELKAQRKAAAAAGLKAGQVIEAMAINGMGGGISAYTSGSG--DEVETLSGLPKM----AWRKLSPAEIMEAARREPIT 610
            R  D   M PSV+ + L + R      + ASG GRR R PSR+ALEASG+LK++G QW+T+E+K EEA+   EL+ QR+   AAGLK+G V+EA      G G +    G G   E+   S   K     AW+K+SP  +  +  +E  T
Sbjct:  172 RSGDTAGMAPSVEFHLLRQAREVAKKEAAASGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEAAGTGTAGDGVGGGVAGELGVGSATTKHGRDPAWQKVSPGILAASPEQEQAT 321          
BLAST of mRNA_F-serratus_M_contig909.20492.1 vs. uniprot
Match: D7G0V0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V0_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 1.870e-14
Identity = 76/202 (37.62%), Postives = 107/202 (52.97%), Query Frame = 2
Query:   26 SGGSQERRARASTSMSTS--TKEVVTSFKTGDPSTSDSAGALPQPRSGHLTSSRLADYMDMTPSVDINALNETRGSTGASSEASGSGRRARVPSRKALEASGKLKNEGIQWLTKEKKEEEAKRMKELKAQRKAAAAAGLKAGQVIEAMAINGMGGGISAYTSGSGDEVETLSGLPK------------MAWRKLSPAEIMEA 589
            SGG  ER A +S++++    TK    +     PS + +A A P P S +   +RLAD   M PSV+   L + R      +EASG GRR R PSR+ALEA+G+LK  G QW+++EKK E+ +   EL+ QRK   AAGLK+G V+E       G      T  +GD +E   G  +              W+K+SP E++ A
Sbjct:  165 SGGKDERGAISSSTVAGENLTKTTAKTSAPSFPSPAPAAEANP-PSSPN---NRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPEATG------TEAAGDGIEERDGEVRGEGGATTLRGSNPGWQKVSP-EVLSA 355          
BLAST of mRNA_F-serratus_M_contig909.20492.1 vs. uniprot
Match: A0A6H5L360_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L360_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 3.020e-14
Identity = 73/215 (33.95%), Postives = 109/215 (50.70%), Query Frame = 2
Query:   23 ESGGSQERRARASTSMSTSTKEVVTSFKTGD----PSTSDSAGALP------QPRSGHLTSSRLADYMDMTPSVDINALNETRGSTGASSEASGSGRRARVPSRKALEASGKLKNEGIQWLTKEKKEEEAKRMKELKAQRKAAAAAGLKAGQVIEAMAINGMGGGISAYTSGSGDEVETLSG---------LPKMA---WRKLSPAEIMEAARRE 601
            +SGG    + R ST        + ++  TG+    P+   SA +LP      +P     +++RLAD   M PSV+   L + R +    +EASG GRR R PSR+ALEA+G+LK  G QW+++EKK E+ +   EL+ QRK   AAGLK+G V+E       G      T  +GD +E   G          P+ +   W K+SP  +   + ++
Sbjct:  391 DSGGKHTSKKRRSTGGKDERGGISSAKVTGENLTKPTVKTSASSLPPPAPAFEPNPPSSSNNRLADSSGMAPSVEFLVLRQAREAAKTEAEASGLGRRPRAPSRRALEAAGRLKGIGAQWMSREKKAEDLRLKAELRLQRKQYQAAGLKSGVVLEMFVPAATG------TEAAGDGIEQRDGEVRGEGGATTPRGSNPGWHKVSPEALSAPSSKQ 599          
BLAST of mRNA_F-serratus_M_contig909.20492.1 vs. uniprot
Match: D8LH07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH07_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 1.320e-12
Identity = 47/87 (54.02%), Postives = 63/87 (72.41%), Query Frame = 2
Query:  200 MTPSVDINALNETRGSTGASSEASGSGRRARVPSRKALEASGKLKNEGIQWLTKEKKEEEAKRMKELKAQRKAAAAAGLKAGQVIEA 460
            M PSV++  L + R +    +EASG GRRAR PSR+ALEASG+LK +G QW+T+EKK E+A+   EL+ +RK +  AGLK G V+EA
Sbjct:  275 MAPSVEMLILRQAREAAKTEAEASGGGRRARAPSRRALEASGQLKGDGAQWMTREKKAEQARVNTELREKRKKSREAGLKVGVVLEA 361          
BLAST of mRNA_F-serratus_M_contig909.20492.1 vs. uniprot
Match: A0A6H5KF29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF29_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 2.670e-12
Identity = 93/311 (29.90%), Postives = 132/311 (42.44%), Query Frame = 2
Query:  287 ARVPSRKALEASGKLKNEGIQWLTKEKKEEEAKRMKELKAQRKAAAAAGLKAGQVIEAMAI-----------------------NGMGGGISAYTSGSGDEVETLSGLPKMAWRKLSPAEI----------------MEAARREPITN----------VATKPPYRGSGPAASEEKDASHRTTGNRLVDTDAGSPDKYNQEVVSESYDTVWMESAKAS--PDRSQDSKRQRGSLGVHEQAMLVHARGVLPWNSSREAIVGDGRSLSGSGQIGSVSVCQFEGCSRKATFGVNGNVRYCGLHPLFGMHRISNP 1066
            AR PSRK LEASG++ +EG Q LTK KKEEE +  +E+K +R+AA +AGLK G+VIEA A                         G  GG  A+++G G +          +WRKLS A+I                 EA +R   T            A K   R S PAAS E   S    G+    T   +P + + +  S +  T  M+S+K     + S      RG  G H+ A +  +    P     E   G+    +G G +    +C+ + C R A++G+    R C +H        S P
Sbjct:  528 ARAPSRKLLEASGRVADEGAQLLTKAKKEEENRLKREMKEKRRAAKSAGLKLGEVIEATAAPLSEEEXXXXXXXXXXXXXXXXSRGSDGGRDAFSAGEGSQ----------SWRKLSQADIPCAAQQXXXXXXXPAEAEAKQRSLSTQDSGAKSGAVPTAGKKRERPSAPAASPENGGSKPAKGDGGEPT--RTPSQRHGKTSSSNGRTDNMKSSKRLRLSNASGGGGSCRGGKG-HDSAGIRRS----PRGHEGE---GERGGKTGGGTVNGKVLCEIDTCYRPASYGIGDTARLCNIHKTPAAKGSSKP 818          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig909.20492.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7G084_ECTSI1.600e-3038.05Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KHQ6_9PHAE1.050e-2837.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6U1_9PHAE3.770e-2442.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5L640_9PHAE4.700e-1638.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LLY6_9PHAE6.950e-1637.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEM4_ECTSI1.080e-1541.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G0V0_ECTSI1.870e-1437.62Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L360_9PHAE3.020e-1433.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH07_ECTSI1.320e-1254.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KF29_9PHAE2.670e-1229.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig909contigF-serratus_M_contig909:237418..239375 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size1231
Cds size1005
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig909.20492.1prot_F-serratus_M_contig909.20492.1Fucus serratus malepolypeptideF-serratus_M_contig909 237577..239308 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932643.7131891-UTR-F-serratus_M_contig909:237417..2375761622932643.7131891-UTR-F-serratus_M_contig909:237417..237576Fucus serratus maleUTRF-serratus_M_contig909 237418..237576 -
1690964401.162665-UTR-F-serratus_M_contig909:237417..2375761690964401.162665-UTR-F-serratus_M_contig909:237417..237576Fucus serratus maleUTRF-serratus_M_contig909 237418..237576 -
1622932643.7724001-UTR-F-serratus_M_contig909:239308..2393751622932643.7724001-UTR-F-serratus_M_contig909:239308..239375Fucus serratus maleUTRF-serratus_M_contig909 239309..239375 -
1690964401.2203422-UTR-F-serratus_M_contig909:239308..2393751690964401.2203422-UTR-F-serratus_M_contig909:239308..239375Fucus serratus maleUTRF-serratus_M_contig909 239309..239375 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932643.725374-CDS-F-serratus_M_contig909:237576..2376251622932643.725374-CDS-F-serratus_M_contig909:237576..237625Fucus serratus maleCDSF-serratus_M_contig909 237577..237625 -
1690964401.1865108-CDS-F-serratus_M_contig909:237576..2376251690964401.1865108-CDS-F-serratus_M_contig909:237576..237625Fucus serratus maleCDSF-serratus_M_contig909 237577..237625 -
1622932643.7393947-CDS-F-serratus_M_contig909:237847..2387811622932643.7393947-CDS-F-serratus_M_contig909:237847..238781Fucus serratus maleCDSF-serratus_M_contig909 237848..238781 -
1690964401.1962402-CDS-F-serratus_M_contig909:237847..2387811690964401.1962402-CDS-F-serratus_M_contig909:237847..238781Fucus serratus maleCDSF-serratus_M_contig909 237848..238781 -
1622932643.7573876-CDS-F-serratus_M_contig909:239286..2393081622932643.7573876-CDS-F-serratus_M_contig909:239286..239308Fucus serratus maleCDSF-serratus_M_contig909 239287..239308 -
1690964401.2072315-CDS-F-serratus_M_contig909:239286..2393081690964401.2072315-CDS-F-serratus_M_contig909:239286..239308Fucus serratus maleCDSF-serratus_M_contig909 239287..239308 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig909.20492.1

>prot_F-serratus_M_contig909.20492.1 ID=prot_F-serratus_M_contig909.20492.1|Name=mRNA_F-serratus_M_contig909.20492.1|organism=Fucus serratus male|type=polypeptide|length=335bp
MSTSTKEVVTSFKTGDPSTSDSAGALPQPRSGHLTSSRLADYMDMTPSVD
INALNETRGSTGASSEASGSGRRARVPSRKALEASGKLKNEGIQWLTKEK
KEEEAKRMKELKAQRKAAAAAGLKAGQVIEAMAINGMGGGISAYTSGSGD
EVETLSGLPKMAWRKLSPAEIMEAARREPITNVATKPPYRGSGPAASEEK
DASHRTTGNRLVDTDAGSPDKYNQEVVSESYDTVWMESAKASPDRSQDSK
RQRGSLGVHEQAMLVHARGVLPWNSSREAIVGDGRSLSGSGQIGSVSVCQ
FEGCSRKATFGVNGNVRYCGLHPLFGMHRISNPE*
back to top

mRNA from alignment at F-serratus_M_contig909:237418..239375-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig909.20492.1 ID=mRNA_F-serratus_M_contig909.20492.1|Name=mRNA_F-serratus_M_contig909.20492.1|organism=Fucus serratus male|type=mRNA|length=1958bp|location=Sequence derived from alignment at F-serratus_M_contig909:237418..239375- (Fucus serratus male)
AAATAAGAAGACAACTGCTACGGAGAGCGGCGGCAGTCAGGAACGTAGGG CGAGGGCTTCGACTTCGATGTCAACATCGACGAAGGAAGGCAAGGCAGTG CTGTGTAAGACAAACATGTGGATCTCGCAATCTAAACACAGTGCGACCTG AACAGTAAGGCCTCAATGAGTTGGTTGCACCCTACTGTAGTACAACTACA TCTTCAGCCACGGCGGCCGTGTGCTGTCAAGGTGCGTCAATCGCTGCTTG TCGCATTTTGACCACGCCTGCGACTCCGCCACCATTCTCGGCCTGTTGTC GCGACTTTCACAATATGTTTTTGCTACATGAAGGGATTCATATACGAGAC TTCGCCCAACGCAGGCTGACACCCCGACCCCTAAGAAAATGTTGTACGTT TCATTTCTTGTAACTAATGCCTAGGAACCTCAATATATAGAAATATAACC ATCATACCCAACCAGTAATCGAGTCCGTGCTTCAACCTCCTCACGCCGTT GCGTGGAATCATTGTGTTACCTCAACGGCTACATTGTCGGGTCGAGAACC CTCTCCACTTACCGTGCCCGGCCCTACATCTGTGTCGGTTCCAGTGGTGA CCTCATTCAAAACTGGAGATCCTAGCACATCAGATAGTGCCGGAGCGCTG CCTCAACCTCGGTCTGGGCATCTGACGAGTTCGCGGCTTGCAGACTACAT GGATATGACGCCGTCCGTTGATATTAATGCCCTCAACGAAACTAGAGGGT CGACAGGGGCGTCTTCGGAGGCGAGCGGGTCCGGGAGGAGGGCGCGAGTC CCGTCCCGCAAGGCACTGGAGGCGTCGGGGAAGCTGAAAAACGAGGGCAT CCAGTGGCTCACAAAGGAAAAAAAAGAGGAGGAGGCCAAACGGATGAAGG AGTTGAAGGCCCAGAGGAAGGCGGCTGCAGCAGCAGGACTGAAGGCGGGA CAGGTGATAGAAGCAATGGCCATAAATGGTATGGGCGGCGGAATTAGCGC GTACACTAGTGGTAGTGGCGACGAGGTTGAAACTCTGTCAGGTCTGCCCA AGATGGCATGGCGTAAGCTCTCCCCGGCAGAAATAATGGAGGCGGCTAGA AGGGAACCAATCACCAACGTTGCCACCAAGCCGCCCTACCGTGGATCAGG TCCAGCGGCGTCGGAGGAAAAAGACGCGAGCCACCGCACAACCGGTAATA GGTTGGTTGATACAGACGCTGGTTCACCCGACAAATATAATCAAGAAGTC GTATCGGAATCCTACGACACGGTATGGATGGAATCAGCGAAAGCTAGCCC TGACCGTTCGCAAGATTCAAAACGCCAGAGAGGATCACTCGGAGTTCATG AGCAGGCTATGCTTGTCCATGCTAGAGGAGTTTTACCATGGAACTCGTCC AGAGAGGCTATTGTAGGGGATGGCAGGAGCCTCAGCGGGTCAGGACAAAT TGGCAGTGTGAGTGTCTGTCAGTTCGAGGGCTGCTCGAGAAAGGCGACGT TCGGTGTCAACGGCAACGTGCGCTACTGGTGAGTGTTGCGTTCGTGGGGG AGAAGTTCAAGTTTGCTCTTTGGAGTTCATTCGGACGAACAAACGAACAA GTCCCGTCCTCTTTACTTGGTTGATAAACATACAGTACCAATGTCATACC AATGTTTCCACGTGGTCCGGTCCTTTCGATCTTAATCTAACTTCGTCCTT TCTCTTGTGCGTGACCTGCCGCGTTCCGCGATGCCGATGCCGACCGTCAG CGGACTACATCCACTCTTTGGCATGCATCGGATCTCCAACCCGGAGTGAA GACCACCCGAGGCATCTACATCACGACAAACTCCGTGTCCACAGGCTGAT TGTGTACACGTATCAATAAATTGTGTGCGGCCCGGTCGATTGTTCTGGTA TTGGTGATTATACCGGCTTCCACGTGTAAATGTCTGAGCGGGGGCAGACA GGCAGCGA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig909:237418..239375-

>mRNA_F-serratus_M_contig909.20492.1 ID=mRNA_F-serratus_M_contig909.20492.1|Name=mRNA_F-serratus_M_contig909.20492.1|organism=Fucus serratus male|type=CDS|length=2010bp|location=Sequence derived from alignment at F-serratus_M_contig909:237418..239375- (Fucus serratus male)
ATGTCAACATCGACGAAGGAAGATGTCAACATCGACGAAGGAAGTGGTGA
CCTCATTCAAAACTGGAGATCCTAGCACATCAGATAGTGCCGGAGCGCTG
CCTCAACCTCGGTCTGGGCATCTGACGAGTTCGCGGCTTGCAGACTACAT
GGATATGACGCCGTCCGTTGATATTAATGCCCTCAACGAAACTAGAGGGT
CGACAGGGGCGTCTTCGGAGGCGAGCGGGTCCGGGAGGAGGGCGCGAGTC
CCGTCCCGCAAGGCACTGGAGGCGTCGGGGAAGCTGAAAAACGAGGGCAT
CCAGTGGCTCACAAAGGAAAAAAAAGAGGAGGAGGCCAAACGGATGAAGG
AGTTGAAGGCCCAGAGGAAGGCGGCTGCAGCAGCAGGACTGAAGGCGGGA
CAGGTGATAGAAGCAATGGCCATAAATGGTATGGGCGGCGGAATTAGCGC
GTACACTAGTGGTAGTGGCGACGAGGTTGAAACTCTGTCAGGTCTGCCCA
AGATGGCATGGCGTAAGCTCTCCCCGGCAGAAATAATGGAGGCGGCTAGA
AGGGAACCAATCACCAACGTTGCCACCAAGCCGCCCTACCGTGGATCAGG
TCCAGCGGCGTCGGAGGAAAAAGACGCGAGCCACCGCACAACCGGTAATA
GGTTGGTTGATACAGACGCTGGTTCACCCGACAAATATAATCAAGAAGTC
GTATCGGAATCCTACGACACGGTATGGATGGAATCAGCGAAAGCTAGCCC
TGACCGTTCGCAAGATTCAAAACGCCAGAGAGGATCACTCGGAGTTCATG
AGCAGGCTATGCTTGTCCATGCTAGAGGAGTTTTACCATGGAACTCGTCC
AGAGAGGCTATTGTAGGGGATGGCAGGAGCCTCAGCGGGTCAGGACAAAT
TGGCAGTGTGAGTGTCTGTCAGTTCGAGGGCTGCTCGAGAAAGGCGACGT
TCGGTGTCAACGGCAACGTGCGCTACTGTGGTGACCTCATTCAAAACTGG
AGATCCTAGCACATCAGATAGTGCCGGAGCGCTGCCTCAACCTCGGTCTG
GGCATCTGACGAGTTCGCGGCTTGCAGACTACATGGATATGACGCCGTCC
GTTGATATTAATGCCCTCAACGAAACTAGAGGGTCGACAGGGGCGTCTTC
GGAGGCGAGCGGGTCCGGGAGGAGGGCGCGAGTCCCGTCCCGCAAGGCAC
TGGAGGCGTCGGGGAAGCTGAAAAACGAGGGCATCCAGTGGCTCACAAAG
GAAAAAAAAGAGGAGGAGGCCAAACGGATGAAGGAGTTGAAGGCCCAGAG
GAAGGCGGCTGCAGCAGCAGGACTGAAGGCGGGACAGGTGATAGAAGCAA
TGGCCATAAATGGTATGGGCGGCGGAATTAGCGCGTACACTAGTGGTAGT
GGCGACGAGGTTGAAACTCTGTCAGGTCTGCCCAAGATGGCATGGCGTAA
GCTCTCCCCGGCAGAAATAATGGAGGCGGCTAGAAGGGAACCAATCACCA
ACGTTGCCACCAAGCCGCCCTACCGTGGATCAGGTCCAGCGGCGTCGGAG
GAAAAAGACGCGAGCCACCGCACAACCGGTAATAGGTTGGTTGATACAGA
CGCTGGTTCACCCGACAAATATAATCAAGAAGTCGTATCGGAATCCTACG
ACACGGTATGGATGGAATCAGCGAAAGCTAGCCCTGACCGTTCGCAAGAT
TCAAAACGCCAGAGAGGATCACTCGGAGTTCATGAGCAGGCTATGCTTGT
CCATGCTAGAGGAGTTTTACCATGGAACTCGTCCAGAGAGGCTATTGTAG
GGGATGGCAGGAGCCTCAGCGGGTCAGGACAAATTGGCAGTGTGAGTGTC
TGTCAGTTCGAGGGCTGCTCGAGAAAGGCGACGTTCGGTGTCAACGGCAA
CGTGCGCTACTGCGGACTACATCCACTCTTTGGCATGCATCGGATCTCCA
ACCCGGAGTGACGGACTACATCCACTCTTTGGCATGCATCGGATCTCCAA
CCCGGAGTGA
back to top