mRNA_F-serratus_M_contig909.20492.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig909.20492.1 vs. uniprot
Match: D7G084_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G084_ECTSI) HSP 1 Score: 134 bits (337), Expect = 1.600e-30 Identity = 113/297 (38.05%), Postives = 153/297 (51.52%), Query Frame = 2
Query: 179 RLADYMDMTPSVDINALNETRGSTGASSEASGSGRRARVPSRKALEASGKLKNEGIQWLTKEKKEEEAKRMKELKAQRKAAAAAGLKAGQVIEAMAI---------NGMGGGISAYTSGSGDEVETLSGLPKMAWRKLSPAEIMEAARREPITNVATKPPYRGSGPAASEEKDASHRTTGNR-----LVDTDAGSPDKYNQEVVSESYDTVWMESAKASPDRSQDSKRQRGSLGVHEQAMLVHARGVLPWNSSREAIVGDGRSLSGSGQIGSVSV-CQFEGCSRKATFGVNGNVRYC 1024
R A + PS D+ L R S A EASGSGRRARVPSRK LEASGK+ E QW+TKEKKEE+A+ K +AQRKAAAAAGLK G+VIEA A G+G G ++ G S + K +WRKL+P EI+ AA ++P A RG+ A +E D + G + +V G ++ E ++ + E D + + GSL H++ + H+ ++S E+ G R Q +V V C+ + CSR A FGV+G VRYC
Sbjct: 416 RTAGQSALAPSDDMRLLQSARQS--AHEEASGSGRRARVPSRKVLEASGKMAGETAQWMTKEKKEEQARINKRFRAQRKAAAAAGLKIGEVIEATASPAPRAESEEEGLGSGGTSIRGGG-------SPVSKASWRKLTPTEILPAAGKKPSAEGAASE-VRGNDAAMAETTD--EQVVGKQPETAPVVSDGGGRSERKPAETMASGAEMSSQE------DSTTTNAFNEGSLKHHKKNQVEHS------SASSESEKGRYRVQQAGRQTSAVKVVCELDSCSRTAKFGVHGIVRYC 688
BLAST of mRNA_F-serratus_M_contig909.20492.1 vs. uniprot
Match: A0A6H5KHQ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ6_9PHAE) HSP 1 Score: 125 bits (315), Expect = 1.050e-28 Identity = 109/291 (37.46%), Postives = 150/291 (51.55%), Query Frame = 2
Query: 179 RLADYMDMTPSVDINALNETRGSTGASSEASGSGRRARVPSRKALEASGKLKNEGIQWLTKEKKEEEAKRMKELKAQRKAAAAAGLKAGQVIEAMAI---------NGMGGGISAYTSGSGDEVETLSGLPKMAWRKLSPAEIMEAARREPITNVATKPPYRGSGPAASEEKDASHRTTGNRLVDTDAGSPDKYNQE-VVSESYDTVWMESAKASPDRSQDSKRQRGSLGVHEQAMLVHARGVLPWNSSREAIVGDGRSLSGSGQIGSVSVCQFEGCSRKATFGVNGNVRY 1021
R A + PS D+ L R S A EASGSGRRARVPSRK LEA+GK+ +E QW+TKEKKEE+A+ K+ +AQRKAA AAG K G+VIEA A +G+G G ++ G S + ++WRKL+P EI+ AA ++P A RGS A +E D G + T S D E +E+ + SA+A+ + +S SL H++ + H+ + R + GR S ++C+ CSR A FGV+G VRY
Sbjct: 128 RTAGQSALAPSDDMRLLRNARQS--AHEEASGSGRRARVPSRKVLEAAGKMADETAQWMTKEKKEEQARINKKFRAQRKAAVAAGPKIGEVIEATASPSPRVESEEDGLGSGATSIRGGR-------SPVSNVSWRKLTPTEILLAAGKKPFVEGAASE-VRGSDAAMAEMMD--EHVVGKQPEQTPVASEDGDRSERKPAETTASDAEMSAQATSNAFTES-----SLEHHKKNQVEHSSAPSESDKGRYRVQQAGRQASAV-----KAICELNSCSRTAKFGVHGIVRY 396
BLAST of mRNA_F-serratus_M_contig909.20492.1 vs. uniprot
Match: A0A6H5K6U1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K6U1_9PHAE) HSP 1 Score: 108 bits (270), Expect = 3.770e-24 Identity = 84/197 (42.64%), Postives = 107/197 (54.31%), Query Frame = 2
Query: 182 LADYMDMTPSVDINALNETRGSTGASSEASGSGRRARVPSRKALEASGKLKNEGIQWLTKEKKEEEAKRMKELKAQRKAAAAAGLKAGQVIEAMAINGMGGGISAYTSGSGDEVETLSGLPKMAWRKLSPAEIMEAARREPITNVATKP-----PYRGSGPAASEEKDASHRTTGNRLVDTDAGSPDKYNQEVVSES 757
+A+ PS ++ L E R S A++EASG GRRAR PSRK LEASGK+ E QW+T+EKKEE+A+ +LK QRKAAAAAGLK G+VIEA G GG D + + +WRKL+PAEI++AA + A K +G+ E A+ TG RL S EV SES
Sbjct: 1 MAEAPGFPPSDEMRLLQEARDSARAAAEASGYGRRARAPSRKFLEASGKIVGESAQWMTREKKEEQARLSLQLKEQRKAAAAAGLKPGEVIEAATAAGAGG----------DGIRGENAPWNGSWRKLTPAEILQAAGKTAGVGKARKSLPGSTDTKGATTEKQREGPATEADTGRRLAKRRGSSA----SEVASES 183
BLAST of mRNA_F-serratus_M_contig909.20492.1 vs. uniprot
Match: A0A6H5L640_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L640_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 4.700e-16 Identity = 66/172 (38.37%), Postives = 94/172 (54.65%), Query Frame = 2
Query: 140 ALPQPRSGHLTS------SRLADYMDMTPSVDINALNETRGSTGASSEASGSGRRARVPSRKALEASGKLKNEGIQWLTKEKKEEEAKRMKELKAQRKAAAAAGLKAGQVIEAMAI---------NGMGGGISAYTSGSGDEVETLSGLPKMAWRKLSPAEIMEAARREPIT 610
+LP P S T +R D M PSV+ + L + R + + SG GRR R PSR+ALEASG+LK++G QW+T+E+K EEA+ EL+ QR+ AAG K+G V+EA +G+GGG++ G G P AW+K+SP + +A +E T
Sbjct: 103 SLPSPTSAAATKPLSSPPNRSGDTAGMAPSVEFHLLRQAREAAKKEAAXSGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARIKAELREQRRQYKAAGFKSGVVLEAFVAKAAGTGTVGDGVGGGVAGKI-GVGSATTKHGRDP--AWQKVSPEMLAASAEQEQAT 271
BLAST of mRNA_F-serratus_M_contig909.20492.1 vs. uniprot
Match: A0A6H5LLY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLY6_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 6.950e-16 Identity = 82/219 (37.44%), Postives = 107/219 (48.86%), Query Frame = 2
Query: 26 SGGSQERRARASTSMSTSTKEVVTSFKTGDPSTSDSAGALP--QPRSGHLTSSRLADYMDMTPSVDINALNETRGSTGASSEASGSGRRARVPSRKALEASGKLKNEGIQWLTKEKKEEEAKRMKELKAQRKAAAAAGLKAGQVIE-----AMAINGMGGGIS---AYTSGSGDEVETLSGLPKMAWRKLSPAEIMEAA--------RREPITNVATKP 628
SGG ER A S ST T E +T T P+ S P +P+ ++RLAD M PSV+ L + R +EASG GRR R PSR+ALEA+G+LK G QW+++EKK E+ + EL+ QRK AAGLK+G V+E A G GI G G + P W+K+SP + A+ RRE KP
Sbjct: 403 SGGKDERGA---ISSSTVTGENLTKT-TAKPAASSLPSPAPAAEPKPPSFPNNRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRLQRKRYQAAGLKSGVVLEMFVPAATGTEAAGDGIEERDGEVRGEGGATTPIGSNP--GWQKVSPETLSAASPKQHSTGQRRESSVGTGQKP 615
BLAST of mRNA_F-serratus_M_contig909.20492.1 vs. uniprot
Match: D8LEM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEM4_ECTSI) HSP 1 Score: 88.6 bits (218), Expect = 1.080e-15 Identity = 62/150 (41.33%), Postives = 85/150 (56.67%), Query Frame = 2
Query: 179 RLADYMDMTPSVDINALNETRGSTGASSEASGSGRRARVPSRKALEASGKLKNEGIQWLTKEKKEEEAKRMKELKAQRKAAAAAGLKAGQVIEAMAINGMGGGISAYTSGSG--DEVETLSGLPKM----AWRKLSPAEIMEAARREPIT 610
R D M PSV+ + L + R + ASG GRR R PSR+ALEASG+LK++G QW+T+E+K EEA+ EL+ QR+ AAGLK+G V+EA G G + G G E+ S K AW+K+SP + + +E T
Sbjct: 172 RSGDTAGMAPSVEFHLLRQAREVAKKEAAASGGGRRPRAPSRRALEASGQLKHDGAQWMTRERKAEEARFKAELREQRRQYKAAGLKSGVVLEAFVAEAAGTGTAGDGVGGGVAGELGVGSATTKHGRDPAWQKVSPGILAASPEQEQAT 321
BLAST of mRNA_F-serratus_M_contig909.20492.1 vs. uniprot
Match: D7G0V0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0V0_ECTSI) HSP 1 Score: 85.1 bits (209), Expect = 1.870e-14 Identity = 76/202 (37.62%), Postives = 107/202 (52.97%), Query Frame = 2
Query: 26 SGGSQERRARASTSMSTS--TKEVVTSFKTGDPSTSDSAGALPQPRSGHLTSSRLADYMDMTPSVDINALNETRGSTGASSEASGSGRRARVPSRKALEASGKLKNEGIQWLTKEKKEEEAKRMKELKAQRKAAAAAGLKAGQVIEAMAINGMGGGISAYTSGSGDEVETLSGLPK------------MAWRKLSPAEIMEA 589
SGG ER A +S++++ TK + PS + +A A P P S + +RLAD M PSV+ L + R +EASG GRR R PSR+ALEA+G+LK G QW+++EKK E+ + EL+ QRK AAGLK+G V+E G T +GD +E G + W+K+SP E++ A
Sbjct: 165 SGGKDERGAISSSTVAGENLTKTTAKTSAPSFPSPAPAAEANP-PSSPN---NRLADSSGMAPSVEFLVLRQAREDAKTEAEASGLGRRPRAPSRRALEAAGRLKGTGAQWMSREKKAEDLRLKAELRQQRKQYQAAGLKSGVVLEMFVPEATG------TEAAGDGIEERDGEVRGEGGATTLRGSNPGWQKVSP-EVLSA 355
BLAST of mRNA_F-serratus_M_contig909.20492.1 vs. uniprot
Match: A0A6H5L360_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L360_9PHAE) HSP 1 Score: 85.5 bits (210), Expect = 3.020e-14 Identity = 73/215 (33.95%), Postives = 109/215 (50.70%), Query Frame = 2
Query: 23 ESGGSQERRARASTSMSTSTKEVVTSFKTGD----PSTSDSAGALP------QPRSGHLTSSRLADYMDMTPSVDINALNETRGSTGASSEASGSGRRARVPSRKALEASGKLKNEGIQWLTKEKKEEEAKRMKELKAQRKAAAAAGLKAGQVIEAMAINGMGGGISAYTSGSGDEVETLSG---------LPKMA---WRKLSPAEIMEAARRE 601
+SGG + R ST + ++ TG+ P+ SA +LP +P +++RLAD M PSV+ L + R + +EASG GRR R PSR+ALEA+G+LK G QW+++EKK E+ + EL+ QRK AAGLK+G V+E G T +GD +E G P+ + W K+SP + + ++
Sbjct: 391 DSGGKHTSKKRRSTGGKDERGGISSAKVTGENLTKPTVKTSASSLPPPAPAFEPNPPSSSNNRLADSSGMAPSVEFLVLRQAREAAKTEAEASGLGRRPRAPSRRALEAAGRLKGIGAQWMSREKKAEDLRLKAELRLQRKQYQAAGLKSGVVLEMFVPAATG------TEAAGDGIEQRDGEVRGEGGATTPRGSNPGWHKVSPEALSAPSSKQ 599
BLAST of mRNA_F-serratus_M_contig909.20492.1 vs. uniprot
Match: D8LH07_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH07_ECTSI) HSP 1 Score: 79.3 bits (194), Expect = 1.320e-12 Identity = 47/87 (54.02%), Postives = 63/87 (72.41%), Query Frame = 2
Query: 200 MTPSVDINALNETRGSTGASSEASGSGRRARVPSRKALEASGKLKNEGIQWLTKEKKEEEAKRMKELKAQRKAAAAAGLKAGQVIEA 460
M PSV++ L + R + +EASG GRRAR PSR+ALEASG+LK +G QW+T+EKK E+A+ EL+ +RK + AGLK G V+EA
Sbjct: 275 MAPSVEMLILRQAREAAKTEAEASGGGRRARAPSRRALEASGQLKGDGAQWMTREKKAEQARVNTELREKRKKSREAGLKVGVVLEA 361
BLAST of mRNA_F-serratus_M_contig909.20492.1 vs. uniprot
Match: A0A6H5KF29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF29_9PHAE) HSP 1 Score: 79.7 bits (195), Expect = 2.670e-12 Identity = 93/311 (29.90%), Postives = 132/311 (42.44%), Query Frame = 2
Query: 287 ARVPSRKALEASGKLKNEGIQWLTKEKKEEEAKRMKELKAQRKAAAAAGLKAGQVIEAMAI-----------------------NGMGGGISAYTSGSGDEVETLSGLPKMAWRKLSPAEI----------------MEAARREPITN----------VATKPPYRGSGPAASEEKDASHRTTGNRLVDTDAGSPDKYNQEVVSESYDTVWMESAKAS--PDRSQDSKRQRGSLGVHEQAMLVHARGVLPWNSSREAIVGDGRSLSGSGQIGSVSVCQFEGCSRKATFGVNGNVRYCGLHPLFGMHRISNP 1066
AR PSRK LEASG++ +EG Q LTK KKEEE + +E+K +R+AA +AGLK G+VIEA A G GG A+++G G + +WRKLS A+I EA +R T A K R S PAAS E S G+ T +P + + + S + T M+S+K + S RG G H+ A + + P E G+ +G G + +C+ + C R A++G+ R C +H S P
Sbjct: 528 ARAPSRKLLEASGRVADEGAQLLTKAKKEEENRLKREMKEKRRAAKSAGLKLGEVIEATAAPLSEEEXXXXXXXXXXXXXXXXSRGSDGGRDAFSAGEGSQ----------SWRKLSQADIPCAAQQXXXXXXXPAEAEAKQRSLSTQDSGAKSGAVPTAGKKRERPSAPAASPENGGSKPAKGDGGEPT--RTPSQRHGKTSSSNGRTDNMKSSKRLRLSNASGGGGSCRGGKG-HDSAGIRRS----PRGHEGE---GERGGKTGGGTVNGKVLCEIDTCYRPASYGIGDTARLCNIHKTPAAKGSSKP 818 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig909.20492.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig909.20492.1 >prot_F-serratus_M_contig909.20492.1 ID=prot_F-serratus_M_contig909.20492.1|Name=mRNA_F-serratus_M_contig909.20492.1|organism=Fucus serratus male|type=polypeptide|length=335bp MSTSTKEVVTSFKTGDPSTSDSAGALPQPRSGHLTSSRLADYMDMTPSVDback to top mRNA from alignment at F-serratus_M_contig909:237418..239375- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig909.20492.1 ID=mRNA_F-serratus_M_contig909.20492.1|Name=mRNA_F-serratus_M_contig909.20492.1|organism=Fucus serratus male|type=mRNA|length=1958bp|location=Sequence derived from alignment at F-serratus_M_contig909:237418..239375- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig909:237418..239375- >mRNA_F-serratus_M_contig909.20492.1 ID=mRNA_F-serratus_M_contig909.20492.1|Name=mRNA_F-serratus_M_contig909.20492.1|organism=Fucus serratus male|type=CDS|length=2010bp|location=Sequence derived from alignment at F-serratus_M_contig909:237418..239375- (Fucus serratus male)back to top |