mRNA_F-serratus_M_contig1277.2044.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1277.2044.1
Unique NamemRNA_F-serratus_M_contig1277.2044.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1277.2044.1 vs. uniprot
Match: D8LKH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH0_ECTSI)

HSP 1 Score: 388 bits (997), Expect = 2.230e-128
Identity = 217/421 (51.54%), Postives = 270/421 (64.13%), Query Frame = 1
Query:    1 RSIADHNFHAQVK*AFYAFEALGEHPFNFTSYEHGYFPEIFTIDGCAKVATDNVSTAQFEVARVDRVVDGDLDHQLAKISMISKMQFKSRLRFISEALPTFSPTTAYRT*CTGGEEGKMPPRGSPEDGDVNQLLLALDGSGIEALSSKTIDDLKYIFRQCFRRGSGIASYSTKNDLVQCLTRLWESSSGRGDGT-CTKLFIERPSGSTAGVEGLFATDGVMNAHVFEILAESPADAVDVLWHLQVSPCLLITDIPCMIQPIADRVRPGLLQDGGRLPRGPDGVVSMPAMQHVGRASRDAVNKYSLQVPPGGYPSP--SLRQDMRQDNIYVAYAGAEPSPHVQPHIDFRKLLRRTAMAAAGEGGANRVGDVPYQGIR--TLAEMHLDSLHQQGCYDMTLFDVVVVHAQWF--AEGGRSDDEG 1242
            RSIADHNF   +K  +YAFEAL +HP+ F SYE G FPEI TIDGCAK+ TDN  T+QF++AR +R VD D  HQL KISMISKM F  R+RF+ EA PTF  +            GKM   GSP+ GD+ +L+ AL    I  LSSK+  DLK I+  CF    GI+ +  K+ LVQC   LW S  G G G  C+KLFI +  G+TAGVEG F  DGVM A+VF+I AES ADAVDV  H  V P L+ITDIPCM+ PIA+R+ P LL++ GRLPR  DGVVS+PA+QH+G  + +  +++S++ P   +PSP  S   D+  DNIY  YA A  S   QPH++F  LL+R+A +A  E     VGD      R  TLAE  L SLHQQGCY MTLF+VV V + W   A   ++DD G
Sbjct:   34 RSIADHNFIETLKECYYAFEALTQHPYEFKSYEWGRFPEIVTIDGCAKINTDNTDTSQFQIARTERHVDTDHQHQLLKISMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKMADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFAGRKGISRFRNKDALVQCFQELWISRDGGGAGERCSKLFIGKQPGTTAGVEGAFTPDGVMYANVFQIAAESAADAVDVSAHFLVPPSLMITDIPCMLAPIAERLHPWLLENEGRLPRDADGVVSLPALQHLGAHAHEFPDEHSVKFPTESFPSPPPSSATDVVVDNIYAVYADANFSLPAQPHVNFGALLQRSARSATAE-----VGDTSSLSKRFCTLAENQLISLHQQGCYAMTLFEVVAVFSAWLHRAVNAKADDGG 449          
BLAST of mRNA_F-serratus_M_contig1277.2044.1 vs. uniprot
Match: A0A6H5JEL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL5_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 1.490e-82
Identity = 140/250 (56.00%), Postives = 170/250 (68.00%), Query Frame = 1
Query:    4 SIADHNFHAQVK*AFYAFEALGEHPFNFTSYEHGYFPEIFTIDGCAKVATDNVSTAQFEVARVDRVVDGDLDHQLAKISMISKMQFKSRLRFISEALPTFSPTTAYRT*CTGGEEGKMPPRGSPEDGDVNQLLLALDGSGIEALSSKTIDDLKYIFRQCFRRGSGIASYSTKNDLVQCLTRLWESSSGRGDGTCTKLFIERPSGSTAGVEGLFATDGVMNAHVFEILAESPADAVDVLWHLQVSPCLLIT 753
            SI DH FHA +K A++AFEAL +HPF F S+ HG +PEIF IDGCAK+ TD+VS  QF++ARV+R VD +L +++ K+SMISKM F + LR++ EA P F PT                P GSPEDGD  +L+ AL    I  LS K+  DLK I+R CF  G GI+ Y TK  L QCL +LWE + G G+  C KLFI +PSGSTAGVEGLF  DGVM AHVF+I AESPADAVD+L HL VS C L T
Sbjct:   14 SIEDHKFHALIKEAYFAFEALVQHPFGFVSFMHGRWPEIFCIDGCAKICTDDVSREQFDIARVERDVDANLYNEMLKMSMISKMVFNAHLRWVLEAAPIFGPT----------------PVGSPEDGDAGELMRALGDGAITDLSDKSFGDLKNIYRLCFPDGKGISMYPTKELLAQCLQKLWELADGEGE-RCLKLFIGKPSGSTAGVEGLFTGDGVMAAHVFQITAESPADAVDMLVHLPVSYCTLST 246          
BLAST of mRNA_F-serratus_M_contig1277.2044.1 vs. uniprot
Match: A0A6H5KB28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB28_9PHAE)

HSP 1 Score: 253 bits (646), Expect = 9.770e-78
Identity = 137/251 (54.58%), Postives = 172/251 (68.53%), Query Frame = 1
Query:    1 RSIADHNFHAQVK*AFYAFEALGEHPFNFTSYEHGYFPEIFTIDGCAKVATDNVSTAQFEVARVDRVVDGDLDHQLAKISMISKMQFKSRLRFISEALPTFSPTTAYRT*CTGGEEGKMPPRGSPEDGDVNQLLLALDGSGIEALSSKTIDDLKYIFRQCFRRGSGIASYSTKNDLVQCLTRLWESSSGRGDGT-CTKLFIERPSGSTAG-VEGLFATDGVMNAHVFEILAESPADAVDVLWHLQVSPCLL 747
            RSI DHNFHA +K A++AFEAL + PF F S+  G + EIF IDGCAK+ TD+VS  QF++AR +R VD DL +++ K+S+ISKM F +RLR++ EA P F P             G+M P GSPE+GD  +L+ AL    I  LS K + DL+ I+R CF  G GI+ Y TK  LVQCL +LWES+   G+G  C+KLFI +PSGSTAG VEGLF  D VM AHVF+I AESPADAVD+L HL V+ C L
Sbjct:   60 RSIEDHNFHALIKQAYFAFEALVQ-PFGFVSFMRGRWREIFCIDGCAKICTDDVSREQFDIARAERDVDADLHNEMLKMSIISKMGFNARLRWVLEAAPIFGPHNRVSNVMYRTARGRMAPVGSPENGDAGELMRALGDGAITDLSDKPVSDLENIYRLCFIDGKGISMYPTKELLVQCLQKLWESAGADGEGERCSKLFIGKPSGSTAGGVEGLFTGDRVMVAHVFQITAESPADAVDMLVHLLVTYCTL 309          
BLAST of mRNA_F-serratus_M_contig1277.2044.1 vs. uniprot
Match: A0A6H5KB33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB33_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 1.740e-67
Identity = 112/219 (51.14%), Postives = 150/219 (68.49%), Query Frame = 1
Query:    4 SIADHNFHAQVK*AFYAFEALGEHPFNFTSYEHGYFPEIFTIDGCAKVATDNVSTAQFEVARVDRVVDGDLDHQLAKISMISKMQFKSRLRFISEALPTFSPTTAYRT*CTGGEEGKMPPRGSPEDGDVNQLLLALDGSGIEALSSKTIDDLKYIFRQCFRRGSGIASYSTKNDLVQCLTRLWESSSGRGDGT-CTKLFIERPSGSTAGVEGLFATDGV 657
            SI DHNF A ++ A++AFE L +HPF+F SY +G+ PE+ +IDGCAKV +D+ + A F+ AR +R+VD DL HQL K+SMISKM F++RLR+++EA PTF               GK PP GS E GD  +LL AL+G G++ L+ KT+DDLK I+R CF  G GI++Y+ K D + C  +LW  + G  +   C+K+FI RPSG TAGVEGLF  DGV
Sbjct:   16 SIRDHNFIAAIRDAYFAFEGLTQHPFDFVSYLYGHCPELMSIDGCAKVISDDATLAHFDQARQERLVDIDLGHQLLKMSMISKMVFRTRLRWVTEAPPTFGRRNRISNVMLRTARGKPPPVGSAETGDAGELLRALNGGGMDDLNEKTLDDLKNIYRLCFPGGRGISAYTKKEDFIGCFQQLWRFALGPDEADRCSKVFIVRPSGKTAGVEGLFTPDGV 234          
BLAST of mRNA_F-serratus_M_contig1277.2044.1 vs. uniprot
Match: A0A6H5K5W4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W4_9PHAE)

HSP 1 Score: 233 bits (593), Expect = 9.500e-67
Identity = 148/420 (35.24%), Postives = 205/420 (48.81%), Query Frame = 1
Query:    7 IADHNFHAQVK*AFYAFEALGEHPFNFTSYEHGYFPEIFTIDGCAKVATDNVSTAQFEVARVDRVVDGDLDHQLAKISMISKMQFKSRLRFISEALPTFSPTTAYRT*CTGGEEGKMPPRGSPEDGDVNQLLLALDGSGIEALSSKTIDDLKYIFRQCFRRGSGIASYSTKNDLVQCLTRLWESSSGRGDGT-CTKLFIERPSGSTAGVEGLFATDGVMNAHVFEILAESPADAVDVLWHLQVSPCLLITDIPCMIQPIADRVRPGLLQDGGRLPRGPDGVVSMPAMQHVGRASRDAVNKYSLQVPPGG--YPSPSLRQ-----DMRQDNIYVAYAGAEPSPHVQPHIDFRKLLRRTAMAAAGEG---GANRVGDVPYQGIRTLAEMHLDSLHQQGCYDMTLFDVVVVHAQWFAEGGRSD 1233
            I DHNF A ++ A++AFE L +HPF+F SY +G+ PE+ +IDGCAKV +D+ + A F+ AR +R+VD DL HQL K+SMISKM+                                                                                        D + C  +LW  + G  +   C+K+FI RPSG TAGVEGLF  DGV+N+H+ +++   P       W    +P +L+TDIPCM+ P A++  PGLLQ+GG LPR   G VS+P +QH+G    D  +++ ++VPP G  + S S        D  + N+Y A+A A   P VQPHIDF  LL+             G +     P + I  LAE  L  LHQQGCY + LF+VV+ +A WF E   +D
Sbjct:    7 IRDHNFIAAIRDAYFAFEGLTQHPFDFVSYLYGHCPELMSIDGCAKVISDDATLAHFDQARQERLVDIDLGHQLLKMSMISKME----------------------------------------------------------------------------------------DFIGCFQQLWRFALGPDEADRCSKVFIVRPSGKTAGVEGLFTPDGVVNSHLLQVVDLEPLWTPCGTWRAIATPSVLVTDIPCMVAPNAEKNVPGLLQNGGALPRNAKGQVSLPGLQHIGARGYDYPDRHEVRVPPTGCAFVSASASSTAPPVDQLRYNVYDAFATALSGP-VQPHIDFSALLKHAGDVVERNRQVQGTDDWSSSPKR-ISELAETSLRYLHQQGCYALNLFEVVLAYALWFQEASVAD 336          
BLAST of mRNA_F-serratus_M_contig1277.2044.1 vs. uniprot
Match: A0A6H5JUN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN3_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 2.680e-58
Identity = 141/370 (38.11%), Postives = 188/370 (50.81%), Query Frame = 1
Query:  241 MISKMQFKSRLRFISEALPTFSPTTAYRT*CTGGEEGKMPPRGSPEDGDVNQLLLALDGSGIEALSSKTIDDLKYIFRQCF---------------RRGSGIASYSTKNDLVQCLTRLWESSSGRGDGT-CTKLFIERPSGSTAGVEGLFATDGVMNAHVFEILAESPADAVDVLWHLQVSPCLLITDIPCMI-QPIAD-----RVRPGLLQDGGRLPRGPDGVVSMPAMQHVGRASRDAVNKYSLQVPPGGYPSPSLRQDMRQDN-------IYVAYAGAEPSPHVQPHIDFRKLLRRTAMAA-------AGEGGANRVG-DVPYQGIRTLAEMHLDSLHQQGCYDMTLFDVVVVHAQWFAEGGRSDDE 1239
            MISKM F  RLR++ EA PT SP             GK+ P G+PE GD   LL AL    I  LS+KT DDL+ I+R C+               R    +  +     L+QCLTR WES+ G GD   C+++FI +PSG T GVEGLF TDGV+ A VF++  ES AD VD++ H Q S     T +P     P+ D        P     GG LPR  +  V +  +QHVG  + +  +   ++VPP  +PSP+        +       +Y AYA  +P P VQPH+DFR LL+R            A EG A+ V      + I  LAE  L SLH+QG + MTLF+VV+++  WF     +  E
Sbjct:    1 MISKMVFDRRLRWVVEAAPTVSPHNRISNVMHRTARGKLAPEGAPERGDAGDLLRALGDGAITDLSNKTKDDLQNIYRLCYPPPARVSASDFWSRQRTRPCVQRFPPLELLIQCLTRPWESA-GIGDRERCSRIFIGKPSGLTTGVEGLFGTDGVLYALVFQVARESAADGVDIISHRQSS-----TTMPADHGYPMHDCTHCREASPRSTPGGGALPRNAELQVCLKELQHVGARAYEFPDLNEVRVPPMEFPSPTTTASASDAHPAQSVPTVYAAYAVGQPMPGVQPHLDFRALLQRACDVVERNREVHATEGNASGVDWSSSAKRIADLAESTLKSLHKQGWHAMTLFEVVLMYMLWFQAAAHAAPE 364          
BLAST of mRNA_F-serratus_M_contig1277.2044.1 vs. uniprot
Match: A0A6H5L3W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3W5_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 1.040e-48
Identity = 103/237 (43.46%), Postives = 143/237 (60.34%), Query Frame = 1
Query:  568 RGDGT-CTKLFIERPSGSTAGVEGLFATDGVMNAHVFEILAESPADAVDVLWHLQVSPCLLITDIPCMIQPIADRVRPGLLQDGGRLPRGPDGVVSMPAMQHVGRASRDAVNKYSLQVPPGGYPSPSLR---------QDMRQDNIYVAYAGAEPSPHVQPHIDFRKLLRRTAMAAAGEGGANRVGDVPYQGIRT--LAEMHLDSLHQQGCYDMTLFDVVVVHAQWFAEGGRSDDEG 1242
            +G+G  C+KLF+ +PSG+TAGVEG F TDGV     F++  ES AD VD+L H+ V PCL+ITDIPC I PIA+R+ PGLLQDGG LPR  +G V +  +QH+G  + +  +++ ++VPP G+P+ +                         AE +P VQPH+DFR LLRR   AA  +  A  V D     +R   LAE  L+ LH++G Y MTL++VV+++  WF   G +  EG
Sbjct:    4 QGEGERCSKLFVGKPSGTTAGVEGFFTTDGVFVYGTFQVTPESAADVVDILAHILVQPCLVITDIPCKIVPIAERLFPGLLQDGGVLPRDAEGQVCLKELQHIGAHAYEFPDEHEVKVPPMGFPTAAFTLGASPVQXXXXXXXXXXXXXXXXAETAPGVQPHVDFRSLLRR---AADAQDRARTVADPSSSLMRISDLAESTLNGLHKRGWYAMTLYEVVLLYYLWFQATGWATPEG 237          
BLAST of mRNA_F-serratus_M_contig1277.2044.1 vs. uniprot
Match: A0A6H5JY55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY55_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 1.040e-46
Identity = 83/167 (49.70%), Postives = 112/167 (67.07%), Query Frame = 1
Query:  235 ISMISKMQFKSRLRFISEALPTFSPTTAYRT*CTGGEEGKMPPRGSPEDGDVNQLLLALDGSGIEALSSKTIDDLKYIFRQCFRRGSGIASYSTKNDLVQCLTRLWESSSGRGDGT-CTKLFIERPSGSTAGVEGLFATDGVMNAHVFEILAESPADAVDVLWHLQV 732
            +SMISKM F++RLR+++EA PTF               GK PP GSPE GD  +LL AL+G G++ L+ KT+DDLK I+R CF  G GI++Y+ K D + C  +LW  + G  +   C+K+FI RPSG TAGVEGLF  DGV+N+H+ ++ +ESPAD VD + HL V
Sbjct:    1 MSMISKMVFRTRLRWVTEAPPTFGRRNRISNVMLRTARGKPPPVGSPETGDAGELLRALNGGGMDDLNEKTLDDLKNIYRLCFPGGRGISAYTKKEDFIGCFQQLWRFALGPDEADRCSKVFIVRPSGKTAGVEGLFTPDGVVNSHLLQVTSESPADVVDTMRHLAV 167          
BLAST of mRNA_F-serratus_M_contig1277.2044.1 vs. uniprot
Match: A0A6H5KTI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI3_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 1.270e-42
Identity = 79/155 (50.97%), Postives = 102/155 (65.81%), Query Frame = 1
Query:    4 SIADHNFHAQVK*AFYAFEALGEHPFNFTSYEHGYFPEIFTIDGCAKVATDNVSTAQFEVARVDRVVDGDLDHQLAKISMISKMQFKSRLRFISEALPTFSPTTAYRT*CTGGEEGKMPPRGSPEDGDVNQLLLALDGSGIEALSSKTIDDLKYI 468
            SI DHNF A +K A++AFEAL +HPF F S+ HG +PEIF IDGCAK+ TD+VS  QF+ AR +R VD DL +++ K+SMISKM F +RLR++ EA P   P             G+M P GSPE+GD  +L+ AL    I  LS K++ DLK I
Sbjct:   14 SIEDHNFRALIKQAYFAFEALVQHPFGFVSFMHGRWPEIFCIDGCAKICTDDVSREQFDFARAERDVDADLHNEMLKMSMISKMVFNARLRWVLEAAPILGPHNRVSNVMHRTARGRMAPVGSPENGDAGELMRALGDGAITDLSDKSVSDLKNI 168          
BLAST of mRNA_F-serratus_M_contig1277.2044.1 vs. uniprot
Match: A0A6H5JL59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL59_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 6.860e-35
Identity = 82/172 (47.67%), Postives = 99/172 (57.56%), Query Frame = 1
Query:  235 ISMISKMQFKSRLRFISEALPTFSPTTAYRT*CTGGEEGKMPPRGSPEDGDVNQLLLALDGSGIEALSSKTIDDLKYIFRQCFRRGSGIASYSTKNDLVQCLTRLWESSSGRGDGT-CTKLFIERPSGSTAGVEGLFATDGVMNAHVFEILAESPADAVDVLWHLQVSPCLL 747
            +SMI KM F +RLR++ EA PTF P             G+M P GSPE+GD  +L+ AL    +  LS K+                          LVQCL +LWES+   G+   C+KLFI +PSGSTAGVEGLF  DGVM AHVF+I AESPADAVD+L HL VS C L
Sbjct:    1 MSMIYKMIFNARLRWVLEAAPTFGPHNRVSNVMHRTARGRMAPVGSPENGDAGELMRALGDGAVTDLSDKS------------------------ELLVQCLQKLWESAGADGERERCSKLFIGKPSGSTAGVEGLFTGDGVMVAHVFQITAESPADAVDMLVHLLVSYCAL 148          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1277.2044.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LKH0_ECTSI2.230e-12851.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEL5_9PHAE1.490e-8256.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KB28_9PHAE9.770e-7854.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KB33_9PHAE1.740e-6751.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5W4_9PHAE9.500e-6735.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUN3_9PHAE2.680e-5838.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3W5_9PHAE1.040e-4843.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY55_9PHAE1.040e-4649.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTI3_9PHAE1.270e-4250.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL59_9PHAE6.860e-3547.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1277contigF-serratus_M_contig1277:143101..145015 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size1242
Cds size888
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1277.2044.1prot_F-serratus_M_contig1277.2044.1Fucus serratus malepolypeptideF-serratus_M_contig1277 143455..145015 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929210.2656372-UTR-F-serratus_M_contig1277:143100..1434541622929210.2656372-UTR-F-serratus_M_contig1277:143100..143454Fucus serratus maleUTRF-serratus_M_contig1277 143101..143454 +
1690962751.5770216-UTR-F-serratus_M_contig1277:143100..1434541690962751.5770216-UTR-F-serratus_M_contig1277:143100..143454Fucus serratus maleUTRF-serratus_M_contig1277 143101..143454 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929210.2793684-CDS-F-serratus_M_contig1277:143454..1436061622929210.2793684-CDS-F-serratus_M_contig1277:143454..143606Fucus serratus maleCDSF-serratus_M_contig1277 143455..143606 +
1690962751.587028-CDS-F-serratus_M_contig1277:143454..1436061690962751.587028-CDS-F-serratus_M_contig1277:143454..143606Fucus serratus maleCDSF-serratus_M_contig1277 143455..143606 +
1622929210.2918632-CDS-F-serratus_M_contig1277:143885..1441081622929210.2918632-CDS-F-serratus_M_contig1277:143885..144108Fucus serratus maleCDSF-serratus_M_contig1277 143886..144108 +
1690962751.5970001-CDS-F-serratus_M_contig1277:143885..1441081690962751.5970001-CDS-F-serratus_M_contig1277:143885..144108Fucus serratus maleCDSF-serratus_M_contig1277 143886..144108 +
1622929210.306342-CDS-F-serratus_M_contig1277:144502..1450151622929210.306342-CDS-F-serratus_M_contig1277:144502..145015Fucus serratus maleCDSF-serratus_M_contig1277 144503..145015 +
1690962751.6044166-CDS-F-serratus_M_contig1277:144502..1450151690962751.6044166-CDS-F-serratus_M_contig1277:144502..145015Fucus serratus maleCDSF-serratus_M_contig1277 144503..145015 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1277.2044.1

>prot_F-serratus_M_contig1277.2044.1 ID=prot_F-serratus_M_contig1277.2044.1|Name=mRNA_F-serratus_M_contig1277.2044.1|organism=Fucus serratus male|type=polypeptide|length=296bp
MPPRGSPEDGDVNQLLLALDGSGIEALSSKTIDDLKYIFRQCFRRGSGIA
SYSTKNDLVQCLTRLWESSSGRGDGTCTKLFIERPSGSTAGVEGLFATDG
VMNAHVFEILAESPADAVDVLWHLQVSPCLLITDIPCMIQPIADRVRPGL
LQDGGRLPRGPDGVVSMPAMQHVGRASRDAVNKYSLQVPPGGYPSPSLRQ
DMRQDNIYVAYAGAEPSPHVQPHIDFRKLLRRTAMAAAGEGGANRVGDVP
YQGIRTLAEMHLDSLHQQGCYDMTLFDVVVVHAQWFAEGGRSDDEG
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mRNA from alignment at F-serratus_M_contig1277:143101..145015+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1277.2044.1 ID=mRNA_F-serratus_M_contig1277.2044.1|Name=mRNA_F-serratus_M_contig1277.2044.1|organism=Fucus serratus male|type=mRNA|length=1915bp|location=Sequence derived from alignment at F-serratus_M_contig1277:143101..145015+ (Fucus serratus male)
CGCAGCATCGCCGACCACAACTTTCACGCGCAAGTGAAATAAGCATTTTA TGCCTTCGAAGCCCTGGGAGAGCACCCGTTCAATTTCACGAGCTACGAGC ACGGATACTTCCCGGAGATATTCACTATTGACGGTTGCGCTAAAGTGGCC ACGGACAACGTTTCCACAGCCCAGTTCGAGGTGGCTCGCGTGGACAGAGT TGTCGACGGGGATCTCGATCATCAGCTTGCGAAGATATCGATGATATCGA AGATGCAGTTCAAGTCGCGTCTACGCTTCATATCTGAGGCTCTCCCGACT TTCTCCCCCACAACCGCATATCGAACTTGATGCACCGGGGGCGAAGAGGG GAAAATGCCGCCTCGAGGTTCTCCCGAAGACGGAGACGTGAACCAGCTCT TGCTCGCACTCGACGGGAGCGGCATCGAGGCCCTTTCAAGCAAGACCATC GACGACCTCAAGTATATCTTCAGACAATGCTTCCGCCGTGGAAGCGGAAT CGCCAGGTCAGTATTTTGATGATGACCTGATCGAGATACATGATGCGGAC GCGTAGAATAGTGTCGTACACTTCACAGCACGGGCATCGAGGCCCTTTCA GGCAAGACCATCGCCGACCTCAAGTATATCTTCAGACAATGCTTCCGCCG TGGAAGCGGAATCGCCAGGTCAGTATTTTGATGATGACCTGATCGAGATA CATGAGGCGGACGCGTAGAATAGTGTCGTACACTTCACAGCACGGTTGCA CGTTTACCTTATGCAGACGCTCGGCGCCTTTACAGCTATTCCACCAAAAA CGATCTCGTCCAGTGCTTGACACGCCTCTGGGAGTCTTCGAGCGGAAGGG GTGACGGAACATGCACCAAGTTGTTCATCGAGAGACCATCGGGATCGACG GCGGGAGTGGAAGGACTCTTTGCCACGGACGGGGTGATGAACGCGCACGT CTTCGAGATCCTCGCGGAGAGCCCAGCAGATGCGGTGGATGTTTTGTGGC ACCTCCAGGTGACCTACGGTGCCGTGTAAAGCACAACCAGCCGTGTCAAC CTCACGTAGAGGAACAGACTCTACGTCGCAGACAGAGAAAATTTCAGGGT TTCTGGAATTAATAGCCTCGCCAATCTGTAAACAGCATTGTTTTTCTATC CTTGGCTAAACTTTTTGTTGGTGAGTTCTGTGTCTTCTTTGTATCGGAAC GTCCTACCCCTGAGCGCCCTACAACCAACCACCAAGCCCTAGAACCCCGA ATGCCCTTAACCATGCATAGCAACATGCCTGGCTGAATTATCCAGTGCTC GAATCGGTGCATAGCACATTTTCAGATCCGCGCCCTATTGTCTCTATCGT GTCTGTATCAACCTTTTTCATCATGTATGTTTATTTTTTCTTCCTCTCGA AGGTGTCACCCTGCCTGCTGATCACGGACATACCGTGCATGATACAACCC ATCGCGGATAGGGTACGCCCCGGTCTGCTGCAAGATGGAGGTCGCCTTCC CCGCGGTCCGGACGGTGTCGTGTCCATGCCAGCAATGCAGCACGTCGGAA GAGCTTCGCGTGACGCCGTCAACAAATACTCCCTGCAGGTGCCCCCGGGA GGATATCCTTCTCCTTCGCTGCGGCAAGACATGCGTCAAGACAATATCTA TGTGGCCTATGCCGGCGCCGAACCGTCTCCGCACGTCCAACCGCATATCG ACTTTCGTAAACTACTCAGGCGTACTGCTATGGCTGCTGCTGGTGAGGGA GGTGCAAATCGGGTTGGAGACGTGCCCTATCAGGGTATCCGCACGCTAGC CGAGATGCATCTCGATTCTCTTCACCAGCAAGGATGCTACGACATGACTC TCTTCGATGTTGTGGTAGTGCACGCGCAATGGTTTGCGGAAGGTGGTAGA AGTGACGATGAAGGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig1277:143101..145015+

>mRNA_F-serratus_M_contig1277.2044.1 ID=mRNA_F-serratus_M_contig1277.2044.1|Name=mRNA_F-serratus_M_contig1277.2044.1|organism=Fucus serratus male|type=CDS|length=1776bp|location=Sequence derived from alignment at F-serratus_M_contig1277:143101..145015+ (Fucus serratus male)
ATGCCGCCTCGAGGTTCTCCCGAAGACGGAGACGTGAACCAGCTCTTGCT
CGCACTCGACGGGAGCGGCATCGAGGCCCTTTCAAGCAAGACCATCGACG
ACCTCAAGTATATCTTCAGACAATGCTTCCGCCGTGGAAGCGGAATCGCC
AGATGCCGCCTCGAGGTTCTCCCGAAGACGGAGACGTGAACCAGCTCTTG
CTCGCACTCGACGGGAGCGGCATCGAGGCCCTTTCAAGCAAGACCATCGA
CGACCTCAAGTATATCTTCAGACAATGCTTCCGCCGTGGAAGCGGAATCG
CCAGCTATTCCACCAAAAACGATCTCGTCCAGTGCTTGACACGCCTCTGG
GAGTCTTCGAGCGGAAGGGGTGACGGAACATGCACCAAGTTGTTCATCGA
GAGACCATCGGGATCGACGGCGGGAGTGGAAGGACTCTTTGCCACGGACG
GGGTGATGAACGCGCACGTCTTCGAGATCCTCGCGGAGAGCCCAGCAGAT
GCGGTGGATGTTTTGTGGCACCTCCAGCTATTCCACCAAAAACGATCTCG
TCCAGTGCTTGACACGCCTCTGGGAGTCTTCGAGCGGAAGGGGTGACGGA
ACATGCACCAAGTTGTTCATCGAGAGACCATCGGGATCGACGGCGGGAGT
GGAAGGACTCTTTGCCACGGACGGGGTGATGAACGCGCACGTCTTCGAGA
TCCTCGCGGAGAGCCCAGCAGATGCGGTGGATGTTTTGTGGCACCTCCAG
GTGTCACCCTGCCTGCTGATCACGGACATACCGTGCATGATACAACCCAT
CGCGGATAGGGTACGCCCCGGTCTGCTGCAAGATGGAGGTCGCCTTCCCC
GCGGTCCGGACGGTGTCGTGTCCATGCCAGCAATGCAGCACGTCGGAAGA
GCTTCGCGTGACGCCGTCAACAAATACTCCCTGCAGGTGCCCCCGGGAGG
ATATCCTTCTCCTTCGCTGCGGCAAGACATGCGTCAAGACAATATCTATG
TGGCCTATGCCGGCGCCGAACCGTCTCCGCACGTCCAACCGCATATCGAC
TTTCGTAAACTACTCAGGCGTACTGCTATGGCTGCTGCTGGTGAGGGAGG
TGCAAATCGGGTTGGAGACGTGCCCTATCAGGGTATCCGCACGCTAGCCG
AGATGCATCTCGATTCTCTTCACCAGCAAGGATGCTACGACATGACTCTC
TTCGATGTTGTGGTAGTGCACGCGCAATGGTTTGCGGAAGGTGGTAGAAG
TGACGATGAAGGCGTGTCACCCTGCCTGCTGATCACGGACATACCGTGCA
TGATACAACCCATCGCGGATAGGGTACGCCCCGGTCTGCTGCAAGATGGA
GGTCGCCTTCCCCGCGGTCCGGACGGTGTCGTGTCCATGCCAGCAATGCA
GCACGTCGGAAGAGCTTCGCGTGACGCCGTCAACAAATACTCCCTGCAGG
TGCCCCCGGGAGGATATCCTTCTCCTTCGCTGCGGCAAGACATGCGTCAA
GACAATATCTATGTGGCCTATGCCGGCGCCGAACCGTCTCCGCACGTCCA
ACCGCATATCGACTTTCGTAAACTACTCAGGCGTACTGCTATGGCTGCTG
CTGGTGAGGGAGGTGCAAATCGGGTTGGAGACGTGCCCTATCAGGGTATC
CGCACGCTAGCCGAGATGCATCTCGATTCTCTTCACCAGCAAGGATGCTA
CGACATGACTCTCTTCGATGTTGTGGTAGTGCACGCGCAATGGTTTGCGG
AAGGTGGTAGAAGTGACGATGAAGGC
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