mRNA_F-serratus_M_contig87.20065.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig87.20065.1 vs. uniprot
Match: A0A1B6ENF5_9HEMI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Cuerna arida TaxID=1464854 RepID=A0A1B6ENF5_9HEMI) HSP 1 Score: 130 bits (326), Expect = 1.660e-35 Identity = 67/153 (43.79%), Postives = 91/153 (59.48%), Query Frame = 1
Query: 28 WKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFKRSQADPCVFWRKH 486
W + D P GK + K V+K K DG VE+YK R V KG+ Q KG Y E+ SP +IR L++ A +Q DV AFL ++ EE+Y++ P+GY D +V RL K+ YGL A W+KKFG L+ GFK+S ADPC+F +K+
Sbjct: 4 WILADLPPGKKAIPCKWVYKVKTNPDGTVERYKARLVIKGYSQRKGTDYGETFSPVAKAGTIRALLSIAANEKMILKQFDVSTAFLYGELEEEIYMQQPEGYSDGSGKVCRLIKSFYGLKQAPRCWNKKFGSFLVNLGFKKSDADPCLFIKKN 156
BLAST of mRNA_F-serratus_M_contig87.20065.1 vs. uniprot
Match: A0A8J6LQ49_TENMO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6LQ49_TENMO) HSP 1 Score: 134 bits (336), Expect = 1.290e-33 Identity = 65/152 (42.76%), Postives = 98/152 (64.47%), Query Frame = 1
Query: 28 WKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFKRSQADPCVFWRK 483
W++VD P+GK + K V+K K DG ++K+K R V KG+ Q +GI Y E+ SP +S+IR L+V A + Q+DV AFL D+ E +Y++ P+G+ D +V RL+K++YGL A W++KF +I GF+RS+ADPC+F R+
Sbjct: 90 WELVDLPQGKRAISNKWVYKVKTNADGSIDKFKARLVIKGYSQQRGIDYDETFSPVARKSTIRTLLSVAANEGMKLAQIDVSTAFLYGDLKETIYMQQPEGHCDGSGRVCRLKKSLYGLKQAPRCWNEKFSNYIIKLGFRRSEADPCLFVRQ 241
BLAST of mRNA_F-serratus_M_contig87.20065.1 vs. uniprot
Match: A0A8J6HDY0_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HDY0_TENMO) HSP 1 Score: 134 bits (337), Expect = 2.110e-33 Identity = 65/152 (42.76%), Postives = 98/152 (64.47%), Query Frame = 1
Query: 28 WKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFKRSQADPCVFWRK 483
W++VD P+GK + K V+K K DG ++K+K R V KG+ Q +GI Y E+ SP +S+IR L+V A + Q+DV AFL D+ E +Y++ P+G+ D +V RL+K++YGL A W++KF +I GF+RS+ADPC+F R+
Sbjct: 525 WELVDLPQGKRAISNKWVYKVKTNADGSIDKFKARLVIKGYSQQRGIDYDETFSPEARKSTIRTLLSVAANEGMKLAQIDVSTAFLYGDLKETIYMQQPEGHGDGSGRVCRLKKSLYGLKQAPCCWNEKFSNYIIKLGFRRSEADPCLFVRQ 676
BLAST of mRNA_F-serratus_M_contig87.20065.1 vs. uniprot
Match: A0A2R6QI23_ACTCC (Endonuclease (Fragment) n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6QI23_ACTCC) HSP 1 Score: 132 bits (332), Expect = 2.650e-33 Identity = 69/152 (45.39%), Postives = 93/152 (61.18%), Query Frame = 1
Query: 28 WKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFKRSQADPCVFWRK 483
W +VD P GK+++G + V+K K DG VE+YK R VAKGF Q GI Y+E+ +P +S+R LAV A W Q+DV+ AFL D+TEE+Y++LP G S NQV RL++A+YGL A W KF + GF S D +F R+
Sbjct: 345 WDLVDLPPGKSIIGCRWVYKIKTRADGTVERYKARLVAKGFTQEYGIDYEETFAPVARLTSVRSLLAVAATRGWSLCQMDVKNAFLNGDLTEEVYMQLPPGSSSSSNQVCRLRRALYGLKQAPRAWYAKFSSTICDLGFSASAYDSALFTRQ 496
BLAST of mRNA_F-serratus_M_contig87.20065.1 vs. uniprot
Match: A0A8J6HGL1_TENMO (Integrase catalytic domain-containing protein n=2 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HGL1_TENMO) HSP 1 Score: 134 bits (336), Expect = 2.970e-33 Identity = 65/152 (42.76%), Postives = 98/152 (64.47%), Query Frame = 1
Query: 28 WKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFKRSQADPCVFWRK 483
W++VD P+GK + K V+K K DG ++K+K R V KG+ Q +GI Y E+ SP +S+IR L+V A + Q+DV AFL D+ E +Y++ P+G+ D +V RL+K++YGL A W++KF +I GF+RS+ADPC+F R+
Sbjct: 1168 WELVDLPQGKRAISNKWVYKVKTNADGSIDKFKARLVIKGYSQQRGIDYDETFSPVARKSTIRTLLSVAANEGMKLAQIDVSTAFLYGDLKETIYMQQPEGHCDGSGRVCRLKKSLYGLKQAPRCWNEKFSNYIIKLGFRRSEADPCLFVRQ 1319
BLAST of mRNA_F-serratus_M_contig87.20065.1 vs. uniprot
Match: A0A8J6L9T5_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6L9T5_TENMO) HSP 1 Score: 134 bits (336), Expect = 3.010e-33 Identity = 65/152 (42.76%), Postives = 98/152 (64.47%), Query Frame = 1
Query: 28 WKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFKRSQADPCVFWRK 483
W++VD P+GK + K V+K K DG ++K+K R V KG+ Q +GI Y E+ SP +S+IR L+V A + Q+DV AFL D+ E +Y++ P+G+ D +V RL+K++YGL A W++KF +I GF+RS+ADPC+F R+
Sbjct: 842 WELVDLPQGKRAISNKWVYKVKTNADGSIDKFKARLVIKGYSQQRGIDYDETFSPVARKSTIRTLLSVAANEGMKLAQIDVSTAFLYGDLKETIYMQQPEGHCDGSGRVCRLKKSLYGLKQAPRCWNEKFSNYIIKLGFRRSEADPCLFVRQ 993
BLAST of mRNA_F-serratus_M_contig87.20065.1 vs. uniprot
Match: A0A8J6HMR3_TENMO (Integrase catalytic domain-containing protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HMR3_TENMO) HSP 1 Score: 133 bits (334), Expect = 5.290e-33 Identity = 65/152 (42.76%), Postives = 97/152 (63.82%), Query Frame = 1
Query: 28 WKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFKRSQADPCVFWRK 483
W++VD P GK + K V+K K DG ++K+K R V KG+ Q +GI Y E+ SP +S+IR L+V A + Q+DV AFL D+ E +Y++ P+G+ D +V RL+K++YGL A W++KF +I GF+RS+ADPC+F R+
Sbjct: 558 WELVDLPHGKRAISNKWVYKVKTNADGSIDKFKARLVIKGYSQQRGIDYDETFSPVARKSTIRTLLSVAANEGMKLAQIDVSTAFLYGDLKETIYMQQPEGHCDGSGRVCRLKKSLYGLKQAPRCWNEKFSNYIIKLGFRRSEADPCLFVRQ 709
BLAST of mRNA_F-serratus_M_contig87.20065.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY) HSP 1 Score: 133 bits (334), Expect = 5.470e-33 Identity = 64/155 (41.29%), Postives = 99/155 (63.87%), Query Frame = 1
Query: 22 GVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFKRSQADPCVF-WRK 483
G W++ D PK + +G K VF+RK ++G+V KYK R VA+G+ QI G+ + E+ +P SIR LA+ +WE Q+DV+ A+L D+ EE+Y+ P+G+ D ++ RL+K +YGL +G W++K EL G+KR +ADPCV+ W +
Sbjct: 937 GTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREWNRKLHRELTELGYKRLEADPCVYLWER 1091
BLAST of mRNA_F-serratus_M_contig87.20065.1 vs. uniprot
Match: UPI001BC8B8AB (hypothetical protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI001BC8B8AB) HSP 1 Score: 128 bits (321), Expect = 7.650e-33 Identity = 68/155 (43.87%), Postives = 101/155 (65.16%), Query Frame = 1
Query: 28 WKVVDRPKGKTVLGTKTVFKRKVGQDGRVE-KYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYR--DSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFKRSQADPCVFWRK 483
WK+ + PKGK +G K VF +K G +V+ +YK R VAKG+ Q +GI Y E SP SSIR+ LA++AQLD E Q+DV+ AFL ++ EE+Y+ P+G++ N V +L+K++YGL + W K+F ++ +G+KRS+ D CV+ RK
Sbjct: 156 WKLANLPKGKKAIGCKWVFAKKEGFPNQVDVRYKARLVAKGYAQKEGIDYNEVFSPVVKHSSIRIMLALVAQLDLELVQMDVKTAFLHGNLEEEIYMTQPEGFKVAGKENMVCKLEKSLYGLKQSSRQWYKRFDEFMLRQGYKRSKYDHCVYLRK 310
BLAST of mRNA_F-serratus_M_contig87.20065.1 vs. uniprot
Match: A0A2N9FVQ5_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FVQ5_FAGSY) HSP 1 Score: 132 bits (331), Expect = 1.260e-32 Identity = 68/164 (41.46%), Postives = 98/164 (59.76%), Query Frame = 1
Query: 1 MDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYRDSP---NQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFKRSQADPCVFWRK 483
+D + G W +VD P GK+ +G K V+K K DG V++YK R VAKGF Q GI Y+E+ +P SS+R +AV A W Q+DV+ AFL ++TEE+Y++LP G+ P ++V RL++A+YGL A W KF + GF S D +F+R+
Sbjct: 301 LDALLKTGTWDLVDLPAGKSAIGCKWVYKIKTRSDGTVDRYKARLVAKGFTQEYGIDYEETFAPVARLSSVRTLIAVSASRHWPLFQMDVKNAFLNGELTEEVYMQLPPGFSQPPGFSHKVCRLRRALYGLKQAPRAWFAKFSSTISQHGFSASSYDSALFFRR 464 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig87.20065.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig87.20065.1 >prot_F-serratus_M_contig87.20065.1 ID=prot_F-serratus_M_contig87.20065.1|Name=mRNA_F-serratus_M_contig87.20065.1|organism=Fucus serratus male|type=polypeptide|length=162bp MDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFback to top mRNA from alignment at F-serratus_M_contig87:498657..499142+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig87.20065.1 ID=mRNA_F-serratus_M_contig87.20065.1|Name=mRNA_F-serratus_M_contig87.20065.1|organism=Fucus serratus male|type=mRNA|length=486bp|location=Sequence derived from alignment at F-serratus_M_contig87:498657..499142+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig87:498657..499142+ >mRNA_F-serratus_M_contig87.20065.1 ID=mRNA_F-serratus_M_contig87.20065.1|Name=mRNA_F-serratus_M_contig87.20065.1|organism=Fucus serratus male|type=CDS|length=972bp|location=Sequence derived from alignment at F-serratus_M_contig87:498657..499142+ (Fucus serratus male)back to top |