mRNA_F-serratus_M_contig8632.20011.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig8632.20011.1
Unique NamemRNA_F-serratus_M_contig8632.20011.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig8632.20011.1 vs. uniprot
Match: D8LKH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH0_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 1.890e-50
Identity = 105/205 (51.22%), Postives = 127/205 (61.95%), Query Frame = 1
Query:   10 CLFGPVRSIADHNFHPQVKEAFYAFEALGEHPFDFTSYEHGYFPEIFTIDGCAKVATDNVSTAQFEVARVDRVVDGDLDHQLAKISMISKMQFKSRLRFISEALPTFSPHNRISNLMHRGRRGKMPPRGSPEDGDVNQLLLAL-----------AIADLKYIFRQCFRRGKRNRQVTIPPKSLVQCDTPLGVFERKGDGTCASCS 591
            C     RSIADHNF   +KE +YAFEAL +HP++F SYE G FPEI TIDGCAK+ TDN  T+QF++AR +R VD D  HQL KISMISKM F  R+RF+ EA PTF   NRISNLM R  RGKM   GSP+ GD+ +L+ AL           + ADLK I+  CF  G++         +LVQC   L +  R G G    CS
Sbjct:   28 CPLAGSRSIADHNFIETLKECYYAFEALTQHPYEFKSYEWGRFPEIVTIDGCAKINTDNTDTSQFQIARTERHVDTDHQHQLLKISMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKMADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFA-GRKGISRFRNKDALVQCFQELWI-SRDGGGAGERCS 230          
BLAST of mRNA_F-serratus_M_contig8632.20011.1 vs. uniprot
Match: A0A6H5KTI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI3_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 1.910e-48
Identity = 83/146 (56.85%), Postives = 108/146 (73.97%), Query Frame = 1
Query:   25 VRSIADHNFHPQVKEAFYAFEALGEHPFDFTSYEHGYFPEIFTIDGCAKVATDNVSTAQFEVARVDRVVDGDLDHQLAKISMISKMQFKSRLRFISEALPTFSPHNRISNLMHRGRRGKMPPRGSPEDGDVNQLLLAL---AIADL 453
            + SI DHNF   +K+A++AFEAL +HPF F S+ HG +PEIF IDGCAK+ TD+VS  QF+ AR +R VD DL +++ K+SMISKM F +RLR++ EA P   PHNR+SN+MHR  RG+M P GSPE+GD  +L+ AL   AI DL
Sbjct:   12 INSIEDHNFRALIKQAYFAFEALVQHPFGFVSFMHGRWPEIFCIDGCAKICTDDVSREQFDFARAERDVDADLHNEMLKMSMISKMVFNARLRWVLEAAPILGPHNRVSNVMHRTARGRMAPVGSPENGDAGELMRALGDGAITDL 157          
BLAST of mRNA_F-serratus_M_contig8632.20011.1 vs. uniprot
Match: A0A6H5KB28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB28_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 1.800e-46
Identity = 98/201 (48.76%), Postives = 130/201 (64.68%), Query Frame = 1
Query:   28 RSIADHNFHPQVKEAFYAFEALGEHPFDFTSYEHGYFPEIFTIDGCAKVATDNVSTAQFEVARVDRVVDGDLDHQLAKISMISKMQFKSRLRFISEALPTFSPHNRISNLMHRGRRGKMPPRGSPEDGDVNQLLLALA-----------IADLKYIFRQCFRRGKRNRQVTIPPKSL-VQCDTPLGVFERKG-DGTCASCS 591
            RSI DHNFH  +K+A++AFEAL + PF F S+  G + EIF IDGCAK+ TD+VS  QF++AR +R VD DL +++ K+S+ISKM F +RLR++ EA P F PHNR+SN+M+R  RG+M P GSPE+GD  +L+ AL            ++DL+ I+R CF  GK       P K L VQC   L  +E  G DG    CS
Sbjct:   60 RSIEDHNFHALIKQAYFAFEALVQ-PFGFVSFMRGRWREIFCIDGCAKICTDDVSREQFDIARAERDVDADLHNEMLKMSIISKMGFNARLRWVLEAAPIFGPHNRVSNVMYRTARGRMAPVGSPENGDAGELMRALGDGAITDLSDKPVSDLENIYRLCFIDGKGISM--YPTKELLVQCLQKL--WESAGADGEGERCS 255          
BLAST of mRNA_F-serratus_M_contig8632.20011.1 vs. uniprot
Match: A0A6H5KB33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB33_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 1.600e-45
Identity = 86/164 (52.44%), Postives = 113/164 (68.90%), Query Frame = 1
Query:   31 SIADHNFHPQVKEAFYAFEALGEHPFDFTSYEHGYFPEIFTIDGCAKVATDNVSTAQFEVARVDRVVDGDLDHQLAKISMISKMQFKSRLRFISEALPTFSPHNRISNLMHRGRRGKMPPRGSPEDGDVNQLLLAL-----------AIADLKYIFRQCFRRGK 489
            SI DHNF   +++A++AFE L +HPFDF SY +G+ PE+ +IDGCAKV +D+ + A F+ AR +R+VD DL HQL K+SMISKM F++RLR+++EA PTF   NRISN+M R  RGK PP GS E GD  +LL AL            + DLK I+R CF  G+
Sbjct:   16 SIRDHNFIAAIRDAYFAFEGLTQHPFDFVSYLYGHCPELMSIDGCAKVISDDATLAHFDQARQERLVDIDLGHQLLKMSMISKMVFRTRLRWVTEAPPTFGRRNRISNVMLRTARGKPPPVGSAETGDAGELLRALNGGGMDDLNEKTLDDLKNIYRLCFPGGR 179          
BLAST of mRNA_F-serratus_M_contig8632.20011.1 vs. uniprot
Match: A0A6H5JEL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL5_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 4.850e-38
Identity = 84/182 (46.15%), Postives = 109/182 (59.89%), Query Frame = 1
Query:   25 VRSIADHNFHPQVKEAFYAFEALGEHPFDFTSYEHGYFPEIFTIDGCAKVATDNVSTAQFEVARVDRVVDGDLDHQLAKISMISKMQFKSRLRFISEALPTFSPHNRISNLMHRGRRGKMPPRGSPEDGDVNQLLLAL-----------AIADLKYIFRQCFRRGKRNRQVTIPPKSLV-QC 534
            + SI DH FH  +KEA++AFEAL +HPF F S+ HG +PEIF IDGCAK+ TD+VS  QF++ARV+R VD +L +++ K+SMISKM F + LR++ EA P F P                 P GSPEDGD  +L+ AL           +  DLK I+R CF  GK       P K L+ QC
Sbjct:   12 INSIEDHKFHALIKEAYFAFEALVQHPFGFVSFMHGRWPEIFCIDGCAKICTDDVSREQFDIARVERDVDANLYNEMLKMSMISKMVFNAHLRWVLEAAPIFGP----------------TPVGSPEDGDAGELMRALGDGAITDLSDKSFGDLKNIYRLCFPDGKGISM--YPTKELLAQC 175          
BLAST of mRNA_F-serratus_M_contig8632.20011.1 vs. uniprot
Match: A0A6H5L3W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3W5_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 1.250e-32
Identity = 80/190 (42.11%), Postives = 110/190 (57.89%), Query Frame = 2
Query:  650 VRARLQILAESPADAVDVLWHLQVSPCLLITDIPCMIQPIADRVRPGLLQDGGRLPRGPDGVVSMPAMQHVGRASRVAVNKYSLRVPPGGYPSPSLR---------QDMRQDNIYAAYAGAEPSPHVQPHIDFRKLLRRTAMAAAGEGGANRVGDVPYQGIRT--LAEMHLDSLHQQGCYAMTLFDVVVV 1186
            V    Q+  ES AD VD+L H+ V PCL+ITDIPC I PIA+R+ PGLLQDGG LPR  +G V +  +QH+G  +    +++ ++VPP G+P+ +                         AE +P VQPH+DFR LLRR   AA  +  A  V D     +R   LAE  L+ LH++G YAMTL++VV++
Sbjct:   36 VYGTFQVTPESAADVVDILAHILVQPCLVITDIPCKIVPIAERLFPGLLQDGGVLPRDAEGQVCLKELQHIGAHAYEFPDEHEVKVPPMGFPTAAFTLGASPVQXXXXXXXXXXXXXXXXAETAPGVQPHVDFRSLLRR---AADAQDRARTVADPSSSLMRISDLAESTLNGLHKRGWYAMTLYEVVLL 222          
BLAST of mRNA_F-serratus_M_contig8632.20011.1 vs. uniprot
Match: A0A6H5JV99_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV99_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 1.140e-31
Identity = 77/173 (44.51%), Postives = 103/173 (59.54%), Query Frame = 2
Query:  716 QVSPCLLITDIPCMIQPIADRVRPGLLQDGGRLPRGPDGVVSMPAMQHVGRASRVAVNKYSLRVPPGGYPSPSLRQDMRQD---NIYAAYAGAEPSPHVQPHIDFRKLL----------RRTAMAAAGEG---GANRVGDVPYQGIRTLAEMHLDSLHQQGCYAMTLFDVVVV 1186
            +V PCL+ITDIPC++ PIAD+  P LL +GG LPR  +G VS+  +QH+G  +R   + +S++VPPGG+PS +    +      N+YA YA AEP P VQ  +DFR LL          R+   A   EG   GA+     P + I  LAE  L SLH QG YA+ LF+VV+V
Sbjct:   14 KVQPCLVITDIPCVLAPIADKNHPDLLDEGGALPRSAEGQVSLKGLQHIGARARDFPDLHSVKVPPGGFPSATASSALGAQPVHNVYAVYAAAEPPPGVQAQLDFRTLLGHHSDMVEKDRQLRAAPDAEGDVTGASDWSSSPKR-ISELAENTLASLHNQGWYAIDLFEVVLV 185          
BLAST of mRNA_F-serratus_M_contig8632.20011.1 vs. uniprot
Match: A0A6H5JKI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKI4_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 1.420e-29
Identity = 77/173 (44.51%), Postives = 102/173 (58.96%), Query Frame = 2
Query:  716 QVSPCLLITDIPCMIQPIADRVRPGLLQDGGRLPRGPDGVVSMPAMQHVGRASRVAVNKYSLRVPPGGYPSPSLRQDMRQD---NIYAAYAGAEPSPHVQPHIDFRKLL----------RRTAMAAAGEG---GANRVGDVPYQGIRTLAEMHLDSLHQQGCYAMTLFDVVVV 1186
            +V PCL+ITDIPCM+ PIAD+  P LL +GG LPR  +G VS+  +QH+G  +R   + +S++VPPGG+ S +    +      N+YA YA AEP P VQ  +DFR LL          R+   A   EG   GA+     P + I  LAE  L SLH QG YA+ LF+VV+V
Sbjct:   14 KVQPCLVITDIPCMLAPIADKNHPDLLDEGGALPRNAEGQVSLKGLQHIGARARDFPDLHSVKVPPGGFTSATASSALGAQPVHNVYAVYAAAEPPPGVQAQLDFRTLLGHHSDMVEKDRQLRAAPDAEGDVTGASDWSSSPKR-ISELAENTLASLHNQGWYAIDLFEVVLV 185          
BLAST of mRNA_F-serratus_M_contig8632.20011.1 vs. uniprot
Match: A0A6H5K5W4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W4_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 1.020e-24
Identity = 73/184 (39.67%), Postives = 99/184 (53.80%), Query Frame = 2
Query:  662 LQILAESPADAVDVLWHLQVSPCLLITDIPCMIQPIADRVRPGLLQDGGRLPRGPDGVVSMPAMQHVGRASRVAVNKYSLRVPPGG--YPSPSLRQ-----DMRQDNIYAAYAGAEPSPHVQPHIDFRKLLRRTAMAAAGEG---GANRVGDVPYQGIRTLAEMHLDSLHQQGCYAMTLFDVVV 1183
            LQ++   P       W    +P +L+TDIPCM+ P A++  PGLLQ+GG LPR   G VS+P +QH+G       +++ +RVPP G  + S S        D  + N+Y A+A A   P VQPHIDF  LL+             G +     P + I  LAE  L  LHQQGCYA+ LF+VV+
Sbjct:  142 LQVVDLEPLWTPCGTWRAIATPSVLVTDIPCMVAPNAEKNVPGLLQNGGALPRNAKGQVSLPGLQHIGARGYDYPDRHEVRVPPTGCAFVSASASSTAPPVDQLRYNVYDAFATALSGP-VQPHIDFSALLKHAGDVVERNRQVQGTDDWSSSPKR-ISELAETSLRYLHQQGCYALNLFEVVL 323          
BLAST of mRNA_F-serratus_M_contig8632.20011.1 vs. uniprot
Match: A0A6H5KLN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLN2_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 8.620e-24
Identity = 54/109 (49.54%), Postives = 73/109 (66.97%), Query Frame = 2
Query:  716 QVSPCLLITDIPCMIQPIADRVRPGLLQDGGRLPRGPDGVVSMPAMQHVGRASRVAVNKYSLRVPPGGYPSPSLRQDMRQD---NIYAAYAGAEPSPHVQPHIDFRKLL 1033
            +V PCL+ITD PCM+ PIAD+  P LL +GG LPR  +G VS+  +QH+G  +R   + +S++VPPGG+PS +    +      N+YA YA AEPSP VQ  +DFR LL
Sbjct:   14 KVQPCLVITDTPCMLAPIADKNHPDLLDEGGALPRNAEGQVSLKGLQHIGARARDFPDLHSVKVPPGGFPSATASSALGAQPVHNVYAVYAAAEPSPGVQAQLDFRTLL 122          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8632.20011.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LKH0_ECTSI1.890e-5051.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTI3_9PHAE1.910e-4856.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KB28_9PHAE1.800e-4648.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KB33_9PHAE1.600e-4552.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEL5_9PHAE4.850e-3846.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3W5_9PHAE1.250e-3242.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV99_9PHAE1.140e-3144.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JKI4_9PHAE1.420e-2944.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5W4_9PHAE1.020e-2439.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLN2_9PHAE8.620e-2449.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig8632contigF-serratus_M_contig8632:3022..5048 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size1186
Cds size648
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig8632.20011.1prot_F-serratus_M_contig8632.20011.1Fucus serratus malepolypeptideF-serratus_M_contig8632 3022..3940 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932533.778613-CDS-F-serratus_M_contig8632:3021..35261622932533.778613-CDS-F-serratus_M_contig8632:3021..3526Fucus serratus maleCDSF-serratus_M_contig8632 3022..3526 +
1690964353.4755874-CDS-F-serratus_M_contig8632:3021..35261690964353.4755874-CDS-F-serratus_M_contig8632:3021..3526Fucus serratus maleCDSF-serratus_M_contig8632 3022..3526 +
1622932533.7988393-CDS-F-serratus_M_contig8632:3797..39401622932533.7988393-CDS-F-serratus_M_contig8632:3797..3940Fucus serratus maleCDSF-serratus_M_contig8632 3798..3940 +
1690964353.4888308-CDS-F-serratus_M_contig8632:3797..39401690964353.4888308-CDS-F-serratus_M_contig8632:3797..3940Fucus serratus maleCDSF-serratus_M_contig8632 3798..3940 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932533.8132076-UTR-F-serratus_M_contig8632:3940..40101622932533.8132076-UTR-F-serratus_M_contig8632:3940..4010Fucus serratus maleUTRF-serratus_M_contig8632 3941..4010 +
1690964353.4993002-UTR-F-serratus_M_contig8632:3940..40101690964353.4993002-UTR-F-serratus_M_contig8632:3940..4010Fucus serratus maleUTRF-serratus_M_contig8632 3941..4010 +
1622932533.8257813-UTR-F-serratus_M_contig8632:4580..50481622932533.8257813-UTR-F-serratus_M_contig8632:4580..5048Fucus serratus maleUTRF-serratus_M_contig8632 4581..5048 +
1690964353.5102-UTR-F-serratus_M_contig8632:4580..50481690964353.5102-UTR-F-serratus_M_contig8632:4580..5048Fucus serratus maleUTRF-serratus_M_contig8632 4581..5048 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig8632.20011.1

>prot_F-serratus_M_contig8632.20011.1 ID=prot_F-serratus_M_contig8632.20011.1|Name=mRNA_F-serratus_M_contig8632.20011.1|organism=Fucus serratus male|type=polypeptide|length=216bp
MYRCLFGPVRSIADHNFHPQVKEAFYAFEALGEHPFDFTSYEHGYFPEIF
TIDGCAKVATDNVSTAQFEVARVDRVVDGDLDHQLAKISMISKMQFKSRL
RFISEALPTFSPHNRISNLMHRGRRGKMPPRGSPEDGDVNQLLLALAIAD
LKYIFRQCFRRGKRNRQVTIPPKSLVQCDTPLGVFERKGDGTCASCSSRD
HRDRRRWKDSLPRTG*
back to top

mRNA from alignment at F-serratus_M_contig8632:3022..5048+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig8632.20011.1 ID=mRNA_F-serratus_M_contig8632.20011.1|Name=mRNA_F-serratus_M_contig8632.20011.1|organism=Fucus serratus male|type=mRNA|length=2027bp|location=Sequence derived from alignment at F-serratus_M_contig8632:3022..5048+ (Fucus serratus male)
ATGTACCGCTGCTTGTTCGGTCCTGTCCGCAGCATCGCCGACCACAACTT TCACCCGCAAGTGAAAGAAGCATTTTATGCCTTCGAAGCCCTGGGAGAGC ACCCGTTCGATTTCACGAGCTACGAGCACGGATACTTCCCGGAGATATTC ACTATTGACGGTTGCGCTAAAGTGGCCACGGACAACGTTTCCACAGCCCA GTTCGAAGTGGCTCGCGTGGACAGAGTTGTCGACGGGGATCTCGATCATC AGCTTGCGAAGATATCGATGATATCGAAGATGCAGTTCAAGTCGCGTCTA CGCTTCATATCTGAGGCTCTCCCGACTTTCTCCCCCCACAACCGTATATC GAACTTGATGCACCGGGGGCGAAGAGGGAAAATGCCGCCTCGAGGTTCTC CCGAAGACGGAGACGTGAACCAGCTCTTGCTCGCACTCGCCATCGCCGAC CTCAAGTATATCTTCAGACAATGCTTCCGCCGTGGAAAGCGGAATCGCCA GGTCAGTATTTTTATGATGACCTGATCGAGATACATGATGCGGACGCGTA GAATAGTGTCGTACACTTCACAGCACGGCATCGAGGCCCTTTCAGGCAAG ACCATCGCCGACCTCAAGTATATCTTCAGACAATGCTTCCGCCGTGGAAG CGGAATCGCCAGGTCAGTATTTTGATGATGACCTGATCAGATCTGAGGCG GACGCGTAGAATAGTGTCGTACACTTCACAGCACGGTCGCACGTTTACCT TATGCAGACGCTCGGCGCCTTTACAGCTATTCCACCAAAAAGTCTCGTCC AGTGTGACACGCCTCTGGGAGTCTTCGAGCGGAAGGGTGACGGAACATGC GCAAGTTGTTCATCGAGAGACCATCGGGATCGACGGCGGTGGAAGGACTC TTTGCCACGGACGGGGTGATGTACGCGCACGTCTTCAGATACTCGCGGAG AGCCCAGCAGATGCGGTGGATGTTTTGTGGCACCTCCAGGTGAGCTACGG TGCCGTGTAAAGCACAACCAGCCGTGTCAACCTCACGTAGAGGAACAGAC TCGTCGCAGTCGCAGATTTCAGGGTTTCTGGAATTAACAGCCTCGCCAAT CTGTAAACAGCATTGTTTTTCTATCCTTGGCTAAACTTTTGTTGGTGAGT TCTGTGTCTTCTTTGTATCCGAACGTCCTACTGAGCGCCCTACAGCAACC ACCAAGCCTAGAACCCCGAATGCCCTTAACCATGCATAGCAACATGCCTG GCTGAATTATCAGAGCTCAAAGATCGGTGCATAGCACATTTCTGGCTTGT TCGGAGTGTTTTTGGAGCTAACTGAAGCAAAATAAAATGACCCATCCTTC ACTTTTCCGTACAAACCTGGTTTCTCGTACGACGTGTCCGTTTGGTTCAC GTGGAACACTCAGGAGTCGTTTGACAACAGGCACGGGGAACGCGTCGGCA AAACATGACGTCCGTGCTTAGATAATTTTCAGATCCGCGCCCTTCTCTCT CTGTCGTGTCTGTATCAACCTTTTTCATCATGCATGCTTATTTTTTCTTC CTCTCGAAGGTGTCACCCTGCCTGCTGATCACGGACATACCGTGCATGAT ACAACCCATCGCGGATAGGGTACGCCCCGGTCTGCTGCAAGATGGAGGTC GCCTTCCCCGCGGTCCGGACGGTGTCGTGTCCATGCCAGCAATGCAGCAC GTCGGAAGAGCTTCGCGTGTCGCCGTCAACAAATACTCCCTGCGGGTGCC CCCGGGAGGATATCCTTCTCCTTCGCTGCGGCAAGACATGCGTCAAGACA ATATCTATGCGGCCTATGCCGGCGCCGAACCGTCTCCGCACGTCCAACCG CATATCGACTTTCGTAAACTACTCAGGCGTACTGCTATGGCTGCTGCTGG TGAGGGAGGTGCAAATCGGGTTGGAGACGTGCCCTATCAGGGTATCCGCA CGCTAGCCGAGATGCATCTCGATTCTCTTCACCAGCAAGGATGCTACGCC ATGACTCTCTTCGATGTTGTGGTAGTG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig8632:3022..5048+

>mRNA_F-serratus_M_contig8632.20011.1 ID=mRNA_F-serratus_M_contig8632.20011.1|Name=mRNA_F-serratus_M_contig8632.20011.1|organism=Fucus serratus male|type=CDS|length=1296bp|location=Sequence derived from alignment at F-serratus_M_contig8632:3022..5048+ (Fucus serratus male)
ATGTACCGCTGCTTGTTCGGTCCTGTCCGCAGCATCGCCGACCACAACTT
TCACCCGCAAGTGAAAGAAGCATTTTATGCCTTCGAAGCCCTGGGAGAGC
ACCCGTTCGATTTCACGAGCTACGAGCACGGATACTTCCCGGAGATATTC
ACTATTGACGGTTGCGCTAAAGTGGCCACGGACAACGTTTCCACAGCCCA
GTTCGAAGTGGCTCGCGTGGACAGAGTTGTCGACGGGGATCTCGATCATC
AGCTTGCGAAGATATCGATGATATCGAAGATGCAGTTCAAGTCGCGTCTA
CGCTTCATATCTGAGGCTCTCCCGACTTTCTCCCCCCACAACCGTATATC
GAACTTGATGCACCGGGGGCGAAGAGGGAAAATGCCGCCTCGAGGTTCTC
CCGAAGACGGAGACGTGAACCAGCTCTTGCTCGCACTCGCCATCGCCGAC
CTCAAGTATATCTTCAGACAATGCTTCCGCCGTGGAAAGCGGAATCGCCA
GGTCAATGTACCGCTGCTTGTTCGGTCCTGTCCGCAGCATCGCCGACCAC
AACTTTCACCCGCAAGTGAAAGAAGCATTTTATGCCTTCGAAGCCCTGGG
AGAGCACCCGTTCGATTTCACGAGCTACGAGCACGGATACTTCCCGGAGA
TATTCACTATTGACGGTTGCGCTAAAGTGGCCACGGACAACGTTTCCACA
GCCCAGTTCGAAGTGGCTCGCGTGGACAGAGTTGTCGACGGGGATCTCGA
TCATCAGCTTGCGAAGATATCGATGATATCGAAGATGCAGTTCAAGTCGC
GTCTACGCTTCATATCTGAGGCTCTCCCGACTTTCTCCCCCCACAACCGT
ATATCGAACTTGATGCACCGGGGGCGAAGAGGGAAAATGCCGCCTCGAGG
TTCTCCCGAAGACGGAGACGTGAACCAGCTCTTGCTCGCACTCGCCATCG
CCGACCTCAAGTATATCTTCAGACAATGCTTCCGCCGTGGAAAGCGGAAT
CGCCAGGTCACTATTCCACCAAAAAGTCTCGTCCAGTGTGACACGCCTCT
GGGAGTCTTCGAGCGGAAGGGTGACGGAACATGCGCAAGTTGTTCATCGA
GAGACCATCGGGATCGACGGCGGTGGAAGGACTCTTTGCCACGGACGGGG
TGACTATTCCACCAAAAAGTCTCGTCCAGTGTGACACGCCTCTGGGAGTC
TTCGAGCGGAAGGGTGACGGAACATGCGCAAGTTGTTCATCGAGAGACCA
TCGGGATCGACGGCGGTGGAAGGACTCTTTGCCACGGACGGGGTGA
back to top