mRNA_F-serratus_M_contig8632.20011.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig8632.20011.1 vs. uniprot
Match: D8LKH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH0_ECTSI) HSP 1 Score: 186 bits (472), Expect = 1.890e-50 Identity = 105/205 (51.22%), Postives = 127/205 (61.95%), Query Frame = 1
Query: 10 CLFGPVRSIADHNFHPQVKEAFYAFEALGEHPFDFTSYEHGYFPEIFTIDGCAKVATDNVSTAQFEVARVDRVVDGDLDHQLAKISMISKMQFKSRLRFISEALPTFSPHNRISNLMHRGRRGKMPPRGSPEDGDVNQLLLAL-----------AIADLKYIFRQCFRRGKRNRQVTIPPKSLVQCDTPLGVFERKGDGTCASCS 591
C RSIADHNF +KE +YAFEAL +HP++F SYE G FPEI TIDGCAK+ TDN T+QF++AR +R VD D HQL KISMISKM F R+RF+ EA PTF NRISNLM R RGKM GSP+ GD+ +L+ AL + ADLK I+ CF G++ +LVQC L + R G G CS
Sbjct: 28 CPLAGSRSIADHNFIETLKECYYAFEALTQHPYEFKSYEWGRFPEIVTIDGCAKINTDNTDTSQFQIARTERHVDTDHQHQLLKISMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKMADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFA-GRKGISRFRNKDALVQCFQELWI-SRDGGGAGERCS 230
BLAST of mRNA_F-serratus_M_contig8632.20011.1 vs. uniprot
Match: A0A6H5KTI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI3_9PHAE) HSP 1 Score: 171 bits (433), Expect = 1.910e-48 Identity = 83/146 (56.85%), Postives = 108/146 (73.97%), Query Frame = 1
Query: 25 VRSIADHNFHPQVKEAFYAFEALGEHPFDFTSYEHGYFPEIFTIDGCAKVATDNVSTAQFEVARVDRVVDGDLDHQLAKISMISKMQFKSRLRFISEALPTFSPHNRISNLMHRGRRGKMPPRGSPEDGDVNQLLLAL---AIADL 453
+ SI DHNF +K+A++AFEAL +HPF F S+ HG +PEIF IDGCAK+ TD+VS QF+ AR +R VD DL +++ K+SMISKM F +RLR++ EA P PHNR+SN+MHR RG+M P GSPE+GD +L+ AL AI DL
Sbjct: 12 INSIEDHNFRALIKQAYFAFEALVQHPFGFVSFMHGRWPEIFCIDGCAKICTDDVSREQFDFARAERDVDADLHNEMLKMSMISKMVFNARLRWVLEAAPILGPHNRVSNVMHRTARGRMAPVGSPENGDAGELMRALGDGAITDL 157
BLAST of mRNA_F-serratus_M_contig8632.20011.1 vs. uniprot
Match: A0A6H5KB28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB28_9PHAE) HSP 1 Score: 171 bits (434), Expect = 1.800e-46 Identity = 98/201 (48.76%), Postives = 130/201 (64.68%), Query Frame = 1
Query: 28 RSIADHNFHPQVKEAFYAFEALGEHPFDFTSYEHGYFPEIFTIDGCAKVATDNVSTAQFEVARVDRVVDGDLDHQLAKISMISKMQFKSRLRFISEALPTFSPHNRISNLMHRGRRGKMPPRGSPEDGDVNQLLLALA-----------IADLKYIFRQCFRRGKRNRQVTIPPKSL-VQCDTPLGVFERKG-DGTCASCS 591
RSI DHNFH +K+A++AFEAL + PF F S+ G + EIF IDGCAK+ TD+VS QF++AR +R VD DL +++ K+S+ISKM F +RLR++ EA P F PHNR+SN+M+R RG+M P GSPE+GD +L+ AL ++DL+ I+R CF GK P K L VQC L +E G DG CS
Sbjct: 60 RSIEDHNFHALIKQAYFAFEALVQ-PFGFVSFMRGRWREIFCIDGCAKICTDDVSREQFDIARAERDVDADLHNEMLKMSIISKMGFNARLRWVLEAAPIFGPHNRVSNVMYRTARGRMAPVGSPENGDAGELMRALGDGAITDLSDKPVSDLENIYRLCFIDGKGISM--YPTKELLVQCLQKL--WESAGADGEGERCS 255
BLAST of mRNA_F-serratus_M_contig8632.20011.1 vs. uniprot
Match: A0A6H5KB33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB33_9PHAE) HSP 1 Score: 166 bits (420), Expect = 1.600e-45 Identity = 86/164 (52.44%), Postives = 113/164 (68.90%), Query Frame = 1
Query: 31 SIADHNFHPQVKEAFYAFEALGEHPFDFTSYEHGYFPEIFTIDGCAKVATDNVSTAQFEVARVDRVVDGDLDHQLAKISMISKMQFKSRLRFISEALPTFSPHNRISNLMHRGRRGKMPPRGSPEDGDVNQLLLAL-----------AIADLKYIFRQCFRRGK 489
SI DHNF +++A++AFE L +HPFDF SY +G+ PE+ +IDGCAKV +D+ + A F+ AR +R+VD DL HQL K+SMISKM F++RLR+++EA PTF NRISN+M R RGK PP GS E GD +LL AL + DLK I+R CF G+
Sbjct: 16 SIRDHNFIAAIRDAYFAFEGLTQHPFDFVSYLYGHCPELMSIDGCAKVISDDATLAHFDQARQERLVDIDLGHQLLKMSMISKMVFRTRLRWVTEAPPTFGRRNRISNVMLRTARGKPPPVGSAETGDAGELLRALNGGGMDDLNEKTLDDLKNIYRLCFPGGR 179
BLAST of mRNA_F-serratus_M_contig8632.20011.1 vs. uniprot
Match: A0A6H5JEL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL5_9PHAE) HSP 1 Score: 148 bits (373), Expect = 4.850e-38 Identity = 84/182 (46.15%), Postives = 109/182 (59.89%), Query Frame = 1
Query: 25 VRSIADHNFHPQVKEAFYAFEALGEHPFDFTSYEHGYFPEIFTIDGCAKVATDNVSTAQFEVARVDRVVDGDLDHQLAKISMISKMQFKSRLRFISEALPTFSPHNRISNLMHRGRRGKMPPRGSPEDGDVNQLLLAL-----------AIADLKYIFRQCFRRGKRNRQVTIPPKSLV-QC 534
+ SI DH FH +KEA++AFEAL +HPF F S+ HG +PEIF IDGCAK+ TD+VS QF++ARV+R VD +L +++ K+SMISKM F + LR++ EA P F P P GSPEDGD +L+ AL + DLK I+R CF GK P K L+ QC
Sbjct: 12 INSIEDHKFHALIKEAYFAFEALVQHPFGFVSFMHGRWPEIFCIDGCAKICTDDVSREQFDIARVERDVDANLYNEMLKMSMISKMVFNAHLRWVLEAAPIFGP----------------TPVGSPEDGDAGELMRALGDGAITDLSDKSFGDLKNIYRLCFPDGKGISM--YPTKELLAQC 175
BLAST of mRNA_F-serratus_M_contig8632.20011.1 vs. uniprot
Match: A0A6H5L3W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3W5_9PHAE) HSP 1 Score: 139 bits (349), Expect = 1.250e-32 Identity = 80/190 (42.11%), Postives = 110/190 (57.89%), Query Frame = 2
Query: 650 VRARLQILAESPADAVDVLWHLQVSPCLLITDIPCMIQPIADRVRPGLLQDGGRLPRGPDGVVSMPAMQHVGRASRVAVNKYSLRVPPGGYPSPSLR---------QDMRQDNIYAAYAGAEPSPHVQPHIDFRKLLRRTAMAAAGEGGANRVGDVPYQGIRT--LAEMHLDSLHQQGCYAMTLFDVVVV 1186
V Q+ ES AD VD+L H+ V PCL+ITDIPC I PIA+R+ PGLLQDGG LPR +G V + +QH+G + +++ ++VPP G+P+ + AE +P VQPH+DFR LLRR AA + A V D +R LAE L+ LH++G YAMTL++VV++
Sbjct: 36 VYGTFQVTPESAADVVDILAHILVQPCLVITDIPCKIVPIAERLFPGLLQDGGVLPRDAEGQVCLKELQHIGAHAYEFPDEHEVKVPPMGFPTAAFTLGASPVQXXXXXXXXXXXXXXXXAETAPGVQPHVDFRSLLRR---AADAQDRARTVADPSSSLMRISDLAESTLNGLHKRGWYAMTLYEVVLL 222
BLAST of mRNA_F-serratus_M_contig8632.20011.1 vs. uniprot
Match: A0A6H5JV99_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV99_9PHAE) HSP 1 Score: 132 bits (333), Expect = 1.140e-31 Identity = 77/173 (44.51%), Postives = 103/173 (59.54%), Query Frame = 2
Query: 716 QVSPCLLITDIPCMIQPIADRVRPGLLQDGGRLPRGPDGVVSMPAMQHVGRASRVAVNKYSLRVPPGGYPSPSLRQDMRQD---NIYAAYAGAEPSPHVQPHIDFRKLL----------RRTAMAAAGEG---GANRVGDVPYQGIRTLAEMHLDSLHQQGCYAMTLFDVVVV 1186
+V PCL+ITDIPC++ PIAD+ P LL +GG LPR +G VS+ +QH+G +R + +S++VPPGG+PS + + N+YA YA AEP P VQ +DFR LL R+ A EG GA+ P + I LAE L SLH QG YA+ LF+VV+V
Sbjct: 14 KVQPCLVITDIPCVLAPIADKNHPDLLDEGGALPRSAEGQVSLKGLQHIGARARDFPDLHSVKVPPGGFPSATASSALGAQPVHNVYAVYAAAEPPPGVQAQLDFRTLLGHHSDMVEKDRQLRAAPDAEGDVTGASDWSSSPKR-ISELAENTLASLHNQGWYAIDLFEVVLV 185
BLAST of mRNA_F-serratus_M_contig8632.20011.1 vs. uniprot
Match: A0A6H5JKI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKI4_9PHAE) HSP 1 Score: 131 bits (329), Expect = 1.420e-29 Identity = 77/173 (44.51%), Postives = 102/173 (58.96%), Query Frame = 2
Query: 716 QVSPCLLITDIPCMIQPIADRVRPGLLQDGGRLPRGPDGVVSMPAMQHVGRASRVAVNKYSLRVPPGGYPSPSLRQDMRQD---NIYAAYAGAEPSPHVQPHIDFRKLL----------RRTAMAAAGEG---GANRVGDVPYQGIRTLAEMHLDSLHQQGCYAMTLFDVVVV 1186
+V PCL+ITDIPCM+ PIAD+ P LL +GG LPR +G VS+ +QH+G +R + +S++VPPGG+ S + + N+YA YA AEP P VQ +DFR LL R+ A EG GA+ P + I LAE L SLH QG YA+ LF+VV+V
Sbjct: 14 KVQPCLVITDIPCMLAPIADKNHPDLLDEGGALPRNAEGQVSLKGLQHIGARARDFPDLHSVKVPPGGFTSATASSALGAQPVHNVYAVYAAAEPPPGVQAQLDFRTLLGHHSDMVEKDRQLRAAPDAEGDVTGASDWSSSPKR-ISELAENTLASLHNQGWYAIDLFEVVLV 185
BLAST of mRNA_F-serratus_M_contig8632.20011.1 vs. uniprot
Match: A0A6H5K5W4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W4_9PHAE) HSP 1 Score: 116 bits (291), Expect = 1.020e-24 Identity = 73/184 (39.67%), Postives = 99/184 (53.80%), Query Frame = 2
Query: 662 LQILAESPADAVDVLWHLQVSPCLLITDIPCMIQPIADRVRPGLLQDGGRLPRGPDGVVSMPAMQHVGRASRVAVNKYSLRVPPGG--YPSPSLRQ-----DMRQDNIYAAYAGAEPSPHVQPHIDFRKLLRRTAMAAAGEG---GANRVGDVPYQGIRTLAEMHLDSLHQQGCYAMTLFDVVV 1183
LQ++ P W +P +L+TDIPCM+ P A++ PGLLQ+GG LPR G VS+P +QH+G +++ +RVPP G + S S D + N+Y A+A A P VQPHIDF LL+ G + P + I LAE L LHQQGCYA+ LF+VV+
Sbjct: 142 LQVVDLEPLWTPCGTWRAIATPSVLVTDIPCMVAPNAEKNVPGLLQNGGALPRNAKGQVSLPGLQHIGARGYDYPDRHEVRVPPTGCAFVSASASSTAPPVDQLRYNVYDAFATALSGP-VQPHIDFSALLKHAGDVVERNRQVQGTDDWSSSPKR-ISELAETSLRYLHQQGCYALNLFEVVL 323
BLAST of mRNA_F-serratus_M_contig8632.20011.1 vs. uniprot
Match: A0A6H5KLN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLN2_9PHAE) HSP 1 Score: 113 bits (282), Expect = 8.620e-24 Identity = 54/109 (49.54%), Postives = 73/109 (66.97%), Query Frame = 2
Query: 716 QVSPCLLITDIPCMIQPIADRVRPGLLQDGGRLPRGPDGVVSMPAMQHVGRASRVAVNKYSLRVPPGGYPSPSLRQDMRQD---NIYAAYAGAEPSPHVQPHIDFRKLL 1033
+V PCL+ITD PCM+ PIAD+ P LL +GG LPR +G VS+ +QH+G +R + +S++VPPGG+PS + + N+YA YA AEPSP VQ +DFR LL
Sbjct: 14 KVQPCLVITDTPCMLAPIADKNHPDLLDEGGALPRNAEGQVSLKGLQHIGARARDFPDLHSVKVPPGGFPSATASSALGAQPVHNVYAVYAAAEPSPGVQAQLDFRTLL 122 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8632.20011.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig8632.20011.1 >prot_F-serratus_M_contig8632.20011.1 ID=prot_F-serratus_M_contig8632.20011.1|Name=mRNA_F-serratus_M_contig8632.20011.1|organism=Fucus serratus male|type=polypeptide|length=216bp MYRCLFGPVRSIADHNFHPQVKEAFYAFEALGEHPFDFTSYEHGYFPEIFback to top mRNA from alignment at F-serratus_M_contig8632:3022..5048+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig8632.20011.1 ID=mRNA_F-serratus_M_contig8632.20011.1|Name=mRNA_F-serratus_M_contig8632.20011.1|organism=Fucus serratus male|type=mRNA|length=2027bp|location=Sequence derived from alignment at F-serratus_M_contig8632:3022..5048+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig8632:3022..5048+ >mRNA_F-serratus_M_contig8632.20011.1 ID=mRNA_F-serratus_M_contig8632.20011.1|Name=mRNA_F-serratus_M_contig8632.20011.1|organism=Fucus serratus male|type=CDS|length=1296bp|location=Sequence derived from alignment at F-serratus_M_contig8632:3022..5048+ (Fucus serratus male)back to top |