prot_F-serratus_M_contig8630.20010.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig8630.20010.1
Unique Name	prot_F-serratus_M_contig8630.20010.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	91

Homology

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BLAST of mRNA_F-serratus_M_contig8630.20010.1 vs. uniprot
Match: D8LM77_ECTSI (Lysine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM77_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 4.020e-41
Identity = 77/90 (85.56%), Postives = 84/90 (93.33%), Query Frame = 0

Query:    1 VVRSQIVFEVKPWEAGADLKSLFEKIKEEKIDGLAWGEAYKLVPVAFGVKKLVLSCVVEDAKVGVDDITDCIEKFEDEVQSVDMTTMNRL 90
            V RSQIVFEVKPWEAGADLK LF+KI++ +IDGL WGEA+KLVPVAFGVKKLVLSCVV D+KVGV+DITD IEKFEDEVQSVDMTTMNRL
Sbjct:  760 VDRSQIVFEVKPWEAGADLKGLFDKIRKTEIDGLVWGEAHKLVPVAFGVKKLVLSCVVVDSKVGVEDITDVIEKFEDEVQSVDMTTMNRL 849

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BLAST of mRNA_F-serratus_M_contig8630.20010.1 vs. uniprot
Match: A0A6H5KBH2_9PHAE (EF1_GNE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KBH2_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 3.480e-40
Identity = 73/90 (81.11%), Postives = 78/90 (86.67%), Query Frame = 0

Query:    1 VVRSQIVFEVKPWEAGADLKSLFEKIKEEKIDGLAWGEAYKLVPVAFGVKKLVLSCVVEDAKVGVDDITDCIEKFEDEVQSVDMTTMNRL 90
            V RSQIVFEVKPW+   DLK LF KI + KI+GL WGEA+KLVPVAFGVKKLVLSCVVED KVGV+DITD IE FEDEVQSVDMTTMNRL
Sbjct:  143 VDRSQIVFEVKPWDTETDLKGLFAKICKTKIEGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVIEGFEDEVQSVDMTTMNRL 232

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BLAST of mRNA_F-serratus_M_contig8630.20010.1 vs. uniprot
Match: A0A6H5JFV9_9PHAE (EF1_GNE domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFV9_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 2.790e-39
Identity = 71/88 (80.68%), Postives = 75/88 (85.23%), Query Frame = 0

Query:    3 RSQIVFEVKPWEAGADLKSLFEKIKEEKIDGLAWGEAYKLVPVAFGVKKLVLSCVVEDAKVGVDDITDCIEKFEDEVQSVDMTTMNRL 90
            RSQIVFEVKPW+   DLK LF KI   +IDGL WGEA+KLVPVAFGVKKLVLSCVVED KVGV+DITD IE FED VQSVDMTTMNRL
Sbjct:   95 RSQIVFEVKPWDTETDLKELFGKICATEIDGLVWGEAHKLVPVAFGVKKLVLSCVVEDDKVGVEDITDVIEAFEDYVQSVDMTTMNRL 182

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BLAST of mRNA_F-serratus_M_contig8630.20010.1 vs. uniprot
Match: A0A7S2UXP5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXP5_9STRA)

HSP 1 Score: 119 bits (299), Expect = 9.570e-32
Identity = 58/90 (64.44%), Postives = 72/90 (80.00%), Query Frame = 0

Query:    1 VVRSQIVFEVKPWEAGADLKSLFEKIKEEKIDGLAWGEAYKLVPVAFGVKKLVLSCVVEDAKVGVDDITDCIEKFEDEVQSVDMTTMNRL 90
            V RSQ++FEVKPWEA  DLKSLF KI   K +GL+WGE Y++ PVAFG+ KLV+SCV+ D  VG+DD+TD IE  EDEVQSVD+ TMN++
Sbjct:  143 VERSQLIFEVKPWEADQDLKSLFAKITALKKEGLSWGEGYEIKPVAFGIMKLVMSCVIVDDLVGMDDVTDPIEAMEDEVQSVDVLTMNKM 232

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BLAST of mRNA_F-serratus_M_contig8630.20010.1 vs. uniprot
Match: A0A6G0WMX9_9STRA (EF1_GNE domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WMX9_9STRA)

HSP 1 Score: 117 bits (293), Expect = 2.530e-31
Identity = 55/90 (61.11%), Postives = 72/90 (80.00%), Query Frame = 0

Query:    1 VVRSQIVFEVKPWEAGADLKSLFEKIKEEKIDGLAWGEAYKLVPVAFGVKKLVLSCVVEDAKVGVDDITDCIEKFEDEVQSVDMTTMNRL 90
            + RSQ+V EVKPWEA  DL+ L  KIKE ++DGL WGE +KLVPVAFG+KKL++ C++ D KV +DDIT+ IE FED VQSVD+ +MN++
Sbjct:  100 IERSQVVIEVKPWEAETDLEELAAKIKEVEVDGLTWGEGHKLVPVAFGIKKLLIQCIIIDDKVLMDDITEAIEAFEDYVQSVDIASMNKM 189

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BLAST of mRNA_F-serratus_M_contig8630.20010.1 vs. uniprot
Match: A0A485L9S1_9STRA (Aste57867_18212 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9S1_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.940e-30
Identity = 55/90 (61.11%), Postives = 72/90 (80.00%), Query Frame = 0

Query:    1 VVRSQIVFEVKPWEAGADLKSLFEKIKEEKIDGLAWGEAYKLVPVAFGVKKLVLSCVVEDAKVGVDDITDCIEKFEDEVQSVDMTTMNRL 90
            + RSQ+V EVKPWEA  DL+ L  +IK  +IDGL+WGE +KLVPVAFG+KKL++ C++ D KV +DDITD IE FED VQSVD+ +MN++
Sbjct:   98 IERSQVVIEVKPWEAETDLEELAAQIKALEIDGLSWGEGHKLVPVAFGIKKLLVQCIIVDDKVLLDDITDAIEAFEDYVQSVDIASMNKV 187

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BLAST of mRNA_F-serratus_M_contig8630.20010.1 vs. uniprot
Match: A0A6G0WJF4_9STRA (EF1_GNE domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJF4_9STRA)

HSP 1 Score: 116 bits (290), Expect = 2.000e-30
Identity = 54/90 (60.00%), Postives = 72/90 (80.00%), Query Frame = 0

Query:    1 VVRSQIVFEVKPWEAGADLKSLFEKIKEEKIDGLAWGEAYKLVPVAFGVKKLVLSCVVEDAKVGVDDITDCIEKFEDEVQSVDMTTMNRL 90
            + RSQ+V EVKPWEA  DL+ L  KIK+ ++DGL WGE +KLVPVAFG+KKL++ C++ D KV +DDIT+ IE FED VQSVD+ +MN++
Sbjct:  140 IERSQVVIEVKPWEAETDLEELAAKIKQVEVDGLTWGEGHKLVPVAFGIKKLLIQCIIIDDKVLMDDITEAIEAFEDYVQSVDIASMNKM 229

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BLAST of mRNA_F-serratus_M_contig8630.20010.1 vs. uniprot
Match: A0A485LAV1_9STRA (Aste57867_18076 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LAV1_9STRA)

HSP 1 Score: 115 bits (289), Expect = 2.830e-30
Identity = 55/90 (61.11%), Postives = 71/90 (78.89%), Query Frame = 0

Query:    1 VVRSQIVFEVKPWEAGADLKSLFEKIKEEKIDGLAWGEAYKLVPVAFGVKKLVLSCVVEDAKVGVDDITDCIEKFEDEVQSVDMTTMNRL 90
            + RSQ+V EVKPWEA  DL+ L  KIK  ++DGL WGE +KLVPVAFG+KKL++ C++ D KV +DDITD IE FED VQSVD+ +MN++
Sbjct:  140 IERSQVVIEVKPWEAETDLEELAVKIKALEVDGLTWGEGHKLVPVAFGIKKLLVQCIIIDDKVLMDDITDAIESFEDYVQSVDIASMNKM 229

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BLAST of mRNA_F-serratus_M_contig8630.20010.1 vs. uniprot
Match: A0A8J5I4Y8_9STRA (EF1_GNE domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5I4Y8_9STRA)

HSP 1 Score: 113 bits (283), Expect = 4.180e-30
Identity = 57/90 (63.33%), Postives = 69/90 (76.67%), Query Frame = 0

Query:    1 VVRSQIVFEVKPWEAGADLKSLFEKIKEEKIDGLAWGEAYKLVPVAFGVKKLVLSCVVEDAKVGVDDITDCIEKFEDEVQSVDMTTMNRL 90
            V RSQ+V EVKPWEA  DL+ L  KIK   +DGL WGE +KLVPVAFG+KKL++ CV+ D  V +DDITD IE FED VQSVD+ +MN+L
Sbjct:   75 VERSQVVIEVKPWEAETDLEELAAKIKALPVDGLTWGEGHKLVPVAFGIKKLLVQCVIIDDLVLLDDITDAIEGFEDYVQSVDVASMNKL 164

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BLAST of mRNA_F-serratus_M_contig8630.20010.1 vs. uniprot
Match: M4B847_HYAAE (EF1_GNE domain-containing protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=M4B847_HYAAE)

HSP 1 Score: 113 bits (283), Expect = 6.120e-30
Identity = 57/90 (63.33%), Postives = 69/90 (76.67%), Query Frame = 0

Query:    1 VVRSQIVFEVKPWEAGADLKSLFEKIKEEKIDGLAWGEAYKLVPVAFGVKKLVLSCVVEDAKVGVDDITDCIEKFEDEVQSVDMTTMNRL 90
            V RSQ+V EVKPWEA  DL+ L  KIK   I+GL WGE +KLVPVAFG+KKL++ CV+ D  V +DDITD IE FED VQSVD+ +MN+L
Sbjct:   89 VERSQVVIEVKPWEAETDLEELAAKIKALPIEGLTWGEGHKLVPVAFGIKKLLVQCVIIDELVLMDDITDAIESFEDYVQSVDVASMNKL 178

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig8630.20010.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig8630.20010.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LM77_ECTSI	4.020e-41	85.56	Lysine--tRNA ligase n=2 Tax=Ectocarpus TaxID=2879 ...	[more]
A0A6H5KBH2_9PHAE	3.480e-40	81.11	EF1_GNE domain-containing protein n=2 Tax=Ectocarp...	[more]
A0A6H5JFV9_9PHAE	2.790e-39	80.68	EF1_GNE domain-containing protein n=3 Tax=Ectocarp...	[more]
A0A7S2UXP5_9STRA	9.570e-32	64.44	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A6G0WMX9_9STRA	2.530e-31	61.11	EF1_GNE domain-containing protein n=1 Tax=Aphanomy...	[more]
A0A485L9S1_9STRA	1.940e-30	61.11	Aste57867_18212 protein n=1 Tax=Aphanomyces stella...	[more]
A0A6G0WJF4_9STRA	2.000e-30	60.00	EF1_GNE domain-containing protein n=1 Tax=Aphanomy...	[more]
A0A485LAV1_9STRA	2.830e-30	61.11	Aste57867_18076 protein n=1 Tax=Aphanomyces stella...	[more]
A0A8J5I4Y8_9STRA	4.180e-30	63.33	EF1_GNE domain-containing protein n=1 Tax=Phytopht...	[more]
M4B847_HYAAE	6.120e-30	63.33	EF1_GNE domain-containing protein n=2 Tax=Peronosp...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014038	Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain	SMART	SM00888	EF1_GNE_2	coord: 3..90 e-value: 1.1E-24 score: 98.0
IPR014038	Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain	PFAM	PF00736	EF1_GNE	coord: 6..90 e-value: 1.0E-28 score: 99.3
IPR014717	Translation elongation factor EF1B/ribosomal protein S6	GENE3D	3.30.70.60		coord: 1..90 e-value: 3.3E-31 score: 109.1
None	No IPR available	PANTHER	PTHR11595	ELONGATION FACTOR 1-BETA	coord: 2..89
None	No IPR available	PANTHER	PTHR11595:SF26	ELONGATION FACTOR 1-DELTA	coord: 2..89
IPR036219	Translation elongation factor eEF-1beta-like superfamily	SUPERFAMILY	54984	eEF-1beta-like	coord: 3..90

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig8630	contig	F-serratus_M_contig8630:4112..4911 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig8630.20010.1	mRNA_F-serratus_M_contig8630.20010.1	Fucus serratus male	mRNA	F-serratus_M_contig8630 4112..4911 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig8630.20010.1 ID=prot_F-serratus_M_contig8630.20010.1|Name=mRNA_F-serratus_M_contig8630.20010.1|organism=Fucus serratus male|type=polypeptide|length=91bp
VVRSQIVFEVKPWEAGADLKSLFEKIKEEKIDGLAWGEAYKLVPVAFGVK
KLVLSCVVEDAKVGVDDITDCIEKFEDEVQSVDMTTMNRL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014038	EF1B_bsu/dsu_GNE
IPR014717	Transl_elong_EF1B/ribosomal_S6
IPR036219	eEF-1beta-like_sf