prot_F-serratus_M_contig847.19849.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig847.19849.1
Unique Nameprot_F-serratus_M_contig847.19849.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length126
Homology
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BLAST of mRNA_F-serratus_M_contig847.19849.1 vs. uniprot
Match: D7FID0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FID0_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 2.900e-13
Identity = 38/71 (53.52%), Postives = 55/71 (77.46%), Query Frame = 0 
Query:   52 SCWKRVEDLEDEEASLDQQLMKLEKIRRGERMEVLTIEQECKLVEIRIIKADGETAQLDEQFRALESTVQD 122
            SCW+RV +LEDEEASL+ +LM+LEKIRRGER+E+L +EQ C+  E+ +++A  E A LD + + LE+  +D
Sbjct:  357 SCWRRVGELEDEEASLNHRLMRLEKIRRGERLEILGLEQVCQAAEVAMLQAQDEGAHLDAKSQILENLAED 427
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig847.19849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FID0_ECTSI2.900e-1353.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 57..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig847contigF-serratus_M_contig847:217787..218687 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig847.19849.1mRNA_F-serratus_M_contig847.19849.1Fucus serratus malemRNAF-serratus_M_contig847 217450..218687 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig847.19849.1 ID=prot_F-serratus_M_contig847.19849.1|Name=mRNA_F-serratus_M_contig847.19849.1|organism=Fucus serratus male|type=polypeptide|length=126bp
MDLSHTDEFRCPGFAPSRHDEGPQDTRFNPGDRLQPSTLSERIELLDQET
RSCWKRVEDLEDEEASLDQQLMKLEKIRRGERMEVLTIEQECKLVEIRII
KADGETAQLDEQFRALESTVQDATDG
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