mRNA_F-serratus_M_contig831.19710.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig831.19710.1 vs. uniprot
Match: A0A6H5KWV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWV2_9PHAE) HSP 1 Score: 168 bits (425), Expect = 1.950e-45 Identity = 85/155 (54.84%), Postives = 108/155 (69.68%), Query Frame = -3
Query: 1 VDEKCFFFKKNGQRYYLREGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIFPFTTQVAARRNSRNRAAGTMETR-MDVTKAVYKEKMLNDVFPAIKRMWPGGDRNVLVQQDNAPAHKIADDPDIVAAGTSDGWNIRLLNQPPN 462
+DEK F+ K GQRYY EGE P+ +VQHKSH+ KVMFLAAV RPR D+ +R FDGKIGI+PFT Q AA+RN RN AAGTM T ++V + +YK K+ N+VFP I+ +P + QQ+NAP H+ +DPD+VAA I L+NQPPN
Sbjct: 60 LDEKWFYICKQGQRYYFYEGEHLPIRKVQHKSHVIKVMFLAAVARPRYDSSRSRQFDGKIGIYPFTVQRAAQRNGRNMAAGTMVTHSVEVNRTLYK-KLNNNVFPDIRAKFPSSPI-IFAQQENAPGHRAMEDPDVVAAAGQGAGRIELVNQPPN 212
BLAST of mRNA_F-serratus_M_contig831.19710.1 vs. uniprot
Match: UPI00052FDC9E (uncharacterized protein LOC100833420 n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=UPI00052FDC9E) HSP 1 Score: 161 bits (407), Expect = 6.100e-45 Identity = 84/160 (52.50%), Postives = 105/160 (65.62%), Query Frame = -3
Query: 1 VMVDEKCFFFKKNGQRYYLREGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIFPFTTQVAARRNSRNRAAGTMETRM--DVTKAVYKEKMLNDVFPAIKRMWPGGDRN--VLVQQDNAPAHKIADDPDIVAAGTSDGWNIRLLNQPPN 468
+ +DEK F+ K Q++YL EE P+ Q K I+KVMFLAAV RPR D N FDGKIGIFPF T+ A R+S NR GTMET++ VTK V ++ ++N V PAIK WP DR +++QQDNA H DP+ VAA TSDG++IRL QPPN
Sbjct: 82 IYIDEKWFYRTKGTQKFYLANDEEDPLRTTQSKHFIEKVMFLAAVARPRFDVEKNITFDGKIGIFPFVTEKPAERSSVNRPKGTMETKVLPTVTKEVSRDYLVNKVLPAIKEKWPEEDRGRPIIIQQDNAKTHISVHDPEFVAAATSDGYDIRLTCQPPN 241
BLAST of mRNA_F-serratus_M_contig831.19710.1 vs. uniprot
Match: UPI001D01A7AC (uncharacterized protein LOC123171070 n=1 Tax=Triticum aestivum TaxID=4565 RepID=UPI001D01A7AC) HSP 1 Score: 154 bits (390), Expect = 2.370e-41 Identity = 80/160 (50.00%), Postives = 103/160 (64.38%), Query Frame = -3
Query: 1 VMVDEKCFFFKKNGQRYYLREGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIFPFTTQVAARRNSRNRAAGTMETRM--DVTKAVYKEKMLNDVFPAIKRMWPGGDRN--VLVQQDNAPAHKIADDPDIVAAGTSDGWNIRLLNQPPN 468
+ +DEK F+ + Q YYL EE P Q K+ I+KVMFLAAV RPR D FDGK+GI+PFT Q AA+R S+NR GTM T++ VT+ V +E M+N + PAI+ WP +R + VQQDNA H DDP+ VAA ++GW+IRL QPPN
Sbjct: 128 IHIDEKWFYRSRGSQNYYLANDEEDPYRSTQSKNFIEKVMFLAAVARPRFDANGTMIFDGKLGIWPFTYQEAAKRKSKNRDVGTMVTKVLPAVTQNVVREYMINFLIPAIRARWPAAERGMPIYVQQDNAKTHIPLDDPEFVAAAQAEGWDIRLTCQPPN 287
BLAST of mRNA_F-serratus_M_contig831.19710.1 vs. uniprot
Match: UPI000D0E11B9 (uncharacterized protein LOC100837505 n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=UPI000D0E11B9) HSP 1 Score: 158 bits (399), Expect = 2.380e-41 Identity = 84/160 (52.50%), Postives = 106/160 (66.25%), Query Frame = -3
Query: 1 VMVDEKCFFFKKNGQRYYLREGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIFPFTTQVAARRNSRNRAAGTMETRM--DVTKAVYKEKMLNDVFPAIKRMWPGGDRN--VLVQQDNAPAHKIADDPDIVAAGTSDGWNIRLLNQPPN 468
+ +DEK F+ K Q++YL EE P+ Q K I+KVMFLAAV RPR D N FDGKIGIFPF T+ A R+S NR GTMET++ VTK V ++ ++N V PAIK WP DR +++QQDNA H + DP+ VAA TSDG++IRL QPPN
Sbjct: 455 IYIDEKWFYRTKRTQKFYLA-NEEDPLRTTQSKHFIEKVMFLAAVARPRFDAEKNITFDGKIGIFPFVTEKPAERSSVNRPKGTMETKVLPTVTKEVSRDYLVNKVLPAIKEKWPEEDRGRPIIIQQDNAKTHILVHDPEFVAAATSDGFDIRLTCQPPN 613
BLAST of mRNA_F-serratus_M_contig831.19710.1 vs. uniprot
Match: UPI001D00E602 (uncharacterized protein LOC123121182 n=2 Tax=Triticinae TaxID=1648030 RepID=UPI001D00E602) HSP 1 Score: 154 bits (390), Expect = 3.720e-41 Identity = 80/160 (50.00%), Postives = 103/160 (64.38%), Query Frame = -3
Query: 1 VMVDEKCFFFKKNGQRYYLREGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIFPFTTQVAARRNSRNRAAGTMETRM--DVTKAVYKEKMLNDVFPAIKRMWPGGDRN--VLVQQDNAPAHKIADDPDIVAAGTSDGWNIRLLNQPPN 468
+ +DEK F+ + Q YYL EE P Q K+ I+KVMFLAAV RPR D FDGK+GI+PFT Q AA+R S+NR GTM T++ VT+ V +E M+N + PAI+ WP +R + VQQDNA H DDP+ VAA ++GW+IRL QPPN
Sbjct: 204 IHIDEKWFYRSRGSQNYYLANDEEDPYRSTQSKNFIEKVMFLAAVARPRFDANGTMIFDGKLGIWPFTYQEAAKRKSKNRDVGTMVTKVLPAVTQNVVREYMINFLIPAIRARWPAAERGMPIYVQQDNAKTHIPLDDPEFVAAAQAEGWDIRLTCQPPN 363
BLAST of mRNA_F-serratus_M_contig831.19710.1 vs. uniprot
Match: A0A6P6UZX5_COFAR (uncharacterized protein LOC113715904 n=1 Tax=Coffea arabica TaxID=13443 RepID=A0A6P6UZX5_COFAR) HSP 1 Score: 148 bits (374), Expect = 6.260e-41 Identity = 76/160 (47.50%), Postives = 104/160 (65.00%), Query Frame = -3
Query: 1 VMVDEKCFFFKKNGQRYYLREGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIFPFTTQVAARRNSRNRAAGTMETR--MDVTKAVYKEKMLNDVFPAIKRMWPGGD--RNVLVQQDNAPAHKIADDPDIVAAGTSDGWNIRLLNQPPN 468
V +DEK F+ K ++YYL EE P+ + K I KVMFLAAV RPR D N++FDGKIGIFPF + A+RNS+NR AGT+ET+ + VTK VY+ ++++V PAI+ WP + + +QQDNA H D + + A T +G++IRL QPPN
Sbjct: 62 VHIDEKWFYMTKESEKYYLHPEEEHPMRTCRSKKFIVKVMFLAAVARPRFDCSRNKHFDGKIGIFPFAFKEPAKRNSKNRVAGTLETKPILSVTKEVYRRCLIDNVLPAIRAKWPQSNVISPIFIQQDNAKPHIDPMDVEFIEAATREGFDIRLSFQPPN 221
BLAST of mRNA_F-serratus_M_contig831.19710.1 vs. uniprot
Match: A0A6P6X993_COFAR (uncharacterized protein LOC113741020 n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6X993_COFAR) HSP 1 Score: 150 bits (379), Expect = 8.770e-41 Identity = 77/160 (48.12%), Postives = 104/160 (65.00%), Query Frame = -3
Query: 1 VMVDEKCFFFKKNGQRYYLREGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIFPFTTQVAARRNSRNRAAGTMETR--MDVTKAVYKEKMLNDVFPAIKRMWPGGD--RNVLVQQDNAPAHKIADDPDIVAAGTSDGWNIRLLNQPPN 468
V +DEK F+ K ++YYL EE P+ + K I KVMFLAAV RPR D N++FDGKIGIFPF + A+RNS+NR AGT+ET+ + VTK VY+ ++++V PAI+ WP D + +QQDNA H D + + A T +G++IRL QPPN
Sbjct: 62 VHIDEKWFYMTKESEKYYLHPEEEHPMRTCRSKKFIVKVMFLAAVARPRFDCSRNKHFDGKIGIFPFAFKEPAKRNSKNRVAGTLETKPILSVTKEVYRRCLIDNVLPAIRAKWPQSDVISPIFIQQDNAKPHIDPMDVEFIEAATREGFDIRLSFQPPN 221
BLAST of mRNA_F-serratus_M_contig831.19710.1 vs. uniprot
Match: A0A6P6VBP7_COFAR (uncharacterized protein LOC113715216 n=4 Tax=Coffea TaxID=13442 RepID=A0A6P6VBP7_COFAR) HSP 1 Score: 150 bits (379), Expect = 1.300e-40 Identity = 77/160 (48.12%), Postives = 104/160 (65.00%), Query Frame = -3
Query: 1 VMVDEKCFFFKKNGQRYYLREGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIFPFTTQVAARRNSRNRAAGTMETR--MDVTKAVYKEKMLNDVFPAIKRMWPGGD--RNVLVQQDNAPAHKIADDPDIVAAGTSDGWNIRLLNQPPN 468
V +DEK F+ K ++YYL EE P+ + K I KVMFLAAV RPR D N++FDGKIGIFPF + A+RNS+NR AGT+ET+ + VTK VY+ ++++V PAI+ WP D + +QQDNA H D + + A T +G++IRL QPPN
Sbjct: 79 VHIDEKWFYMTKESEKYYLHPEEEHPMRTCRSKKFIVKVMFLAAVARPRFDCSRNKHFDGKIGIFPFAFKEPAKRNSKNRVAGTLETKPILSVTKEVYRRCLIDNVLPAIRAKWPQSDVISPIFIQQDNAKPHIDPMDVEFIEAATREGFDIRLSFQPPN 238
BLAST of mRNA_F-serratus_M_contig831.19710.1 vs. uniprot
Match: UPI000E6FC8C0 (uncharacterized protein LOC113311561 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FC8C0) HSP 1 Score: 149 bits (376), Expect = 1.340e-40 Identity = 77/160 (48.12%), Postives = 101/160 (63.12%), Query Frame = -3
Query: 1 VMVDEKCFFFKKNGQRYYLREGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIFPFTTQVAARRNSRNRAAGTMETR--MDVTKAVYKEKMLNDVFPAIKRMWPGGDRN--VLVQQDNAPAHKIADDPDIVAAGTSDGWNIRLLNQPPN 468
V +DEK F+ K Q+YYL E+ P+ + K I KVMFLA V RPR D+ NN F GKIGIFPFT Q A+RNS+NR AGTMET+ + VTK V + ++N VFPA++ WP + +QQDNA H +D + + + DG++IRL QPPN
Sbjct: 5 VHIDEKWFYMTKESQKYYLLPEEDEPLRSCKSKCFITKVMFLAVVARPRYDSANNEEFSGKIGIFPFTFQEPAQRNSKNRTAGTMETKEILSVTKDVIRSCLINKVFPAMRSKWPRSSNMDPIFIQQDNARPHINPNDQEFLEDASKDGFDIRLSFQPPN 164
BLAST of mRNA_F-serratus_M_contig831.19710.1 vs. uniprot
Match: A0A8I6X5T8_HORVV (Uncharacterized protein n=2 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6X5T8_HORVV) HSP 1 Score: 150 bits (379), Expect = 2.390e-40 Identity = 77/160 (48.12%), Postives = 102/160 (63.75%), Query Frame = -3
Query: 1 VMVDEKCFFFKKNGQRYYLREGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIFPFTTQVAARRNSRNRAAGTMETRM--DVTKAVYKEKMLNDVFPAIKRMWPGGDRN--VLVQQDNAPAHKIADDPDIVAAGTSDGWNIRLLNQPPN 468
+ +DEK F+ + Q YYL EE P Q K+ I+KVMFLAAV RPR D FDGK+GI+PFT Q A+R ++NR AGTM T++ VT+ V +E M+N + PAI+ WP + + +QQDNA H DDP+ VAA ++GW+IRL QPPN
Sbjct: 106 IHIDEKWFYRSRGSQNYYLANDEEDPYRSTQSKNFIEKVMFLAAVARPRFDGNGTMTFDGKLGIWPFTYQEPAKRKNKNRDAGTMVTKVLPAVTQNVVREYMINFLIPAIRARWPAAEHGMPIYLQQDNAKTHIPLDDPEFVAAAQAEGWDIRLTCQPPN 265 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig831.19710.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig831.19710.1 >prot_F-serratus_M_contig831.19710.1 ID=prot_F-serratus_M_contig831.19710.1|Name=mRNA_F-serratus_M_contig831.19710.1|organism=Fucus serratus male|type=polypeptide|length=131bp MFQPSDVPAATMSGSSAILCAGALSCCTKTFRSPPGHMRLMAGNTSFSIFback to top mRNA from alignment at F-serratus_M_contig831:211362..212002+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig831.19710.1 ID=mRNA_F-serratus_M_contig831.19710.1|Name=mRNA_F-serratus_M_contig831.19710.1|organism=Fucus serratus male|type=mRNA|length=641bp|location=Sequence derived from alignment at F-serratus_M_contig831:211362..212002+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig831:211362..212002+ >mRNA_F-serratus_M_contig831.19710.1 ID=mRNA_F-serratus_M_contig831.19710.1|Name=mRNA_F-serratus_M_contig831.19710.1|organism=Fucus serratus male|type=CDS|length=786bp|location=Sequence derived from alignment at F-serratus_M_contig831:211362..212002+ (Fucus serratus male)back to top |