mRNA_F-serratus_M_contig826.19662.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig826.19662.1 vs. uniprot
Match: D8LTH4_ECTSI (BolA protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTH4_ECTSI) HSP 1 Score: 194 bits (493), Expect = 6.790e-54 Identity = 107/169 (63.31%), Postives = 126/169 (74.56%), Query Frame = 3
Query: 84 MSSPARRLLLGVCLVAQRSVSYHIPRAVPASPFSYARATSRSMG-IFTQSRRHGLHSSRVVMQAVT--MQETIESRLVEALSPVHLEVINESHMHSGPATESHFKVVVVSEKFEGKSLVARHRMVNELFAAEMKSSAMHALSIQGKTPSQWDEEGHKVAASPPCMGGSK 581
M S R+LLLG CL+A R+ ++H+P V +S + R+T G + S R S+ M A + MQETIE+RL EALSPVHLEVINESHMHSGPA ESHFKV+VVS++FEGK L+ARHRMVN LFA EMK MHALSIQGKTP+QW+ EGHKVA SPPCMGGSK
Sbjct: 1 MMSTTRQLLLGACLIAGRTGAFHVP--VASSLSQHTRSTLAVAGKCNSASVRRRFRSAGFAMAAASGEMQETIEARLSEALSPVHLEVINESHMHSGPAKESHFKVIVVSDEFEGKPLLARHRMVNALFAEEMKGK-MHALSIQGKTPAQWEAEGHKVAPSPPCMGGSK 166
BLAST of mRNA_F-serratus_M_contig826.19662.1 vs. uniprot
Match: D8LTH3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTH3_ECTSI) HSP 1 Score: 155 bits (393), Expect = 8.370e-39 Identity = 97/222 (43.69%), Postives = 133/222 (59.91%), Query Frame = 2
Query: 1739 LVMFNTAWVTTSTAPIAAAGLLGQPLGRAMVATASSHAIFALSKFTLAYGAMNVGSDAARGPAY-PSSRRPKSTAPPPRPSVGRPRTLLPLSRTRAPVPRLPPM--GTATGADTTNSITLQVRRSAKSVPRVWLMVVTALGGPGVGTVASLATHRLGLISIPAVWSSVSRGSALGTLISASLCHGGAGTRWAARWAVFQGIFGVFLSFILSLEVLLAVSVIN 2395
++++ TAW+TTS P+AAAG++GQPL RA+VAT ++HA FA KF+LA AM+ P Y P RR + P P P+ R R + P L P G +QVRRSA+SVP++WLM +TA GGP +G V S + GL+++PA SS+SRGS + L++ +LC+GGAGT ARWAVFQGI G + +LS L+ V + N
Sbjct: 1 MILYGTAWMTTSLGPVAAAGVIGQPLSRALVATCAAHASFAAIKFSLAILAMSNFP-----PVYAPPPRRHPNNKPTP-PTTPRNXXXXKAPRRKLEFPSLSPRRRGPPAPVSAVPGTRIQVRRSARSVPKLWLMALTAAGGPAMGAVGSAVAWKAGLVAMPAALSSLSRGSVISALLAGTLCYGGAGTEVVARWAVFQGIMGAPFAALLSPSALMLVYLCN 216
BLAST of mRNA_F-serratus_M_contig826.19662.1 vs. uniprot
Match: A0A8J4ZH80_9CHEL (DNA-binding transcriptional regulator BolA n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4ZH80_9CHEL) HSP 1 Score: 121 bits (304), Expect = 4.830e-29 Identity = 62/103 (60.19%), Postives = 76/103 (73.79%), Query Frame = 3
Query: 273 VTMQETIESRLVEALSPVHLEVINESHMHSGPATESHFKVVVVSEKFEGKSLVARHRMVNELFAAEMKSSAMHALSIQGKTPSQWDEEGHKVAASPPCMGGSK 581
+ +Q TIE +L E L P L+VINES+MHSGPATESHFKVVVVS KFEGK L+ARHRM+N A E+ S +HAL++ TP ++ E+ KVA SP C GGSK
Sbjct: 1 MNIQNTIEQKLTETLDPEVLDVINESNMHSGPATESHFKVVVVSNKFEGKMLIARHRMINAALAEELNS--IHALALHTMTPDEYFEKSGKVADSPQCEGGSK 101
BLAST of mRNA_F-serratus_M_contig826.19662.1 vs. uniprot
Match: A0A4R1EY83_9GAMM (BolA protein n=1 Tax=Cocleimonas flava TaxID=634765 RepID=A0A4R1EY83_9GAMM) HSP 1 Score: 121 bits (303), Expect = 6.580e-29 Identity = 61/103 (59.22%), Postives = 77/103 (74.76%), Query Frame = 3
Query: 273 VTMQETIESRLVEALSPVHLEVINESHMHSGPATESHFKVVVVSEKFEGKSLVARHRMVNELFAAEMKSSAMHALSIQGKTPSQWDEEGHKVAASPPCMGGSK 581
+ MQ TIE +L E L+P LEVINES+MHSGPATESHFKV+ VS+ FEGK L+ARHRM+N A E++ +HAL++ TPS++ E+ KVA SP C GGSK
Sbjct: 1 MNMQTTIEEKLTETLAPEVLEVINESYMHSGPATESHFKVIAVSDAFEGKMLIARHRMINAALADELQQ--IHALALHTMTPSEYFEKAGKVADSPQCEGGSK 101
BLAST of mRNA_F-serratus_M_contig826.19662.1 vs. uniprot
Match: B3RW48_TRIAD (Uncharacterized protein n=1 Tax=Trichoplax adhaerens TaxID=10228 RepID=B3RW48_TRIAD) HSP 1 Score: 119 bits (298), Expect = 3.510e-28 Identity = 56/100 (56.00%), Postives = 77/100 (77.00%), Query Frame = 3
Query: 282 QETIESRLVEALSPVHLEVINESHMHSGP-ATESHFKVVVVSEKFEGKSLVARHRMVNELFAAEMKSSAMHALSIQGKTPSQWDEEGHKVAASPPCMGGS 578
+ +I ++L E L P+HL+VINES+MH+ P +E+HFKV++VS+ F GKSL+ RHRMVNEL A E+ S ++HALSIQ KT QW++ H + SPPC+GGS
Sbjct: 5 ETSIHNKLSERLKPIHLDVINESNMHNVPKGSETHFKVIIVSDLFNGKSLLQRHRMVNELLAEEL-SGSVHALSIQAKTSQQWEDSNHHITKSPPCLGGS 103
BLAST of mRNA_F-serratus_M_contig826.19662.1 vs. uniprot
Match: UPI001864A9EA (bolA-like protein 1 n=1 Tax=Colossoma macropomum TaxID=42526 RepID=UPI001864A9EA) HSP 1 Score: 119 bits (298), Expect = 1.200e-27 Identity = 66/134 (49.25%), Postives = 88/134 (65.67%), Query Frame = 3
Query: 183 SYARATSRSMGIFTQSRRHGLHSSRVVMQAVTMQETIESRLVEALSPVHLEVINESHMHS-GPATESHFKVVVVSEKFEGKSLVARHRMVNELFAAEMKSSAMHALSIQGKTPSQWDEEGHKVAASPPCMGGSK 581
S A A SR + F S G H ++ +I ++L +AL P HLEV+NESHMH+ P +ESHF+V+VVS +FEG SL+ RHR+VNE E+ SS++HAL+IQ KTP QW + +A SPPC+GGSK
Sbjct: 9 SLALALSRQLSHFRPSMEPGAHRP--------VETSIRTKLTQALQPEHLEVLNESHMHAVPPGSESHFRVLVVSPRFEGLSLLQRHRLVNEALREEL-SSSVHALAIQAKTPQQWSSD-PSLAKSPPCLGGSK 132
BLAST of mRNA_F-serratus_M_contig826.19662.1 vs. uniprot
Match: UPI00109BCE19 (bolA-like protein DDB_G0274169 isoform X1 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BCE19) HSP 1 Score: 119 bits (298), Expect = 1.200e-27 Identity = 61/117 (52.14%), Postives = 84/117 (71.79%), Query Frame = 3
Query: 240 GLHSSRV---VMQAVTMQETIESRLVEALSPVHLEVINESHMHSGP-ATESHFKVVVVSEKFEGKSLVARHRMVNELFAAEMKSSAMHALSIQGKTPSQWDEEGHKVAASPPCMGGS 578
GL SS+ +Q +++Q TI +L + P H+EVINES+MH+ P +E+HFKVVVVS F+ K L+ RHRMVN++ E++S +HALSIQ KTP+QW+ GHKV SPPC+GG+
Sbjct: 29 GLKSSQFCTSTVQRMSVQATITDKLTKKFQPQHMEVINESYMHNVPKGSETHFKVVVVSALFQDKPLIQRHRMVNDVLKNELESG-VHALSIQAKTPTQWEASGHKVNMSPPCLGGA 144
BLAST of mRNA_F-serratus_M_contig826.19662.1 vs. uniprot
Match: A0A2T6NR61_9GAMM (BolA family transcriptional regulator n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2T6NR61_9GAMM) HSP 1 Score: 117 bits (294), Expect = 1.260e-27 Identity = 56/105 (53.33%), Postives = 79/105 (75.24%), Query Frame = 3
Query: 276 TMQETIESRLVEALSPVHLEVINESHMHSGP-ATESHFKVVVVSEKFEGKSLVARHRMVNELFAAEMKSSAMHALSIQGKTPSQWDEEGHKVAASPPCMGGSK*G 587
T+QETI+++L A +P+HLEV+NESHMH+ P +ESHFKVV+VSE F+G+ L+ RHR VN++ E++ +HAL++ TP W ++G KVA SPPC+GGS G
Sbjct: 3 TIQETIQTKLASAFAPLHLEVVNESHMHNVPEGSESHFKVVLVSEAFKGEKLINRHRQVNKVLTEELQGG-VHALALHTLTPEDWFDQGGKVADSPPCLGGSNRG 106
BLAST of mRNA_F-serratus_M_contig826.19662.1 vs. uniprot
Match: A0A553Q4D8_9TELE (Uncharacterized protein n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553Q4D8_9TELE) HSP 1 Score: 119 bits (298), Expect = 1.520e-27 Identity = 60/102 (58.82%), Postives = 78/102 (76.47%), Query Frame = 3
Query: 279 MQETIESRLVEALSPVHLEVINESHMHS-GPATESHFKVVVVSEKFEGKSLVARHRMVNELFAAEMKSSAMHALSIQGKTPSQWDEEGHKVAASPPCMGGSK 581
++ T+ ++L +ALSP HLEVINESHMH+ P +ESHF+VVVVS +FEG SL+ RHR+VN+ E+ SS +HAL+IQ KTP QW + K+ SPPCMGGSK
Sbjct: 37 IETTVRTKLTQALSPEHLEVINESHMHAVPPGSESHFRVVVVSPRFEGLSLLQRHRLVNDALKEEL-SSCIHALAIQAKTPQQWSSD-PKLGKSPPCMGGSK 136
BLAST of mRNA_F-serratus_M_contig826.19662.1 vs. uniprot
Match: A0A2M7G1L8_9BACT (Transcriptional regulator n=1 Tax=bacterium (Candidatus Blackallbacteria) CG17_big_fil_post_rev_8_21_14_2_50_48_46 TaxID=2014261 RepID=A0A2M7G1L8_9BACT) HSP 1 Score: 117 bits (293), Expect = 1.660e-27 Identity = 57/101 (56.44%), Postives = 73/101 (72.28%), Query Frame = 3
Query: 279 MQETIESRLVEALSPVHLEVINESHMHSGPATESHFKVVVVSEKFEGKSLVARHRMVNELFAAEMKSSAMHALSIQGKTPSQWDEEGHKVAASPPCMGGSK 581
+Q +ESRL EAL+P+HLEV+NESH HSGPA +SHFKV+ VS+ FEG++ VARHR +N L A ++ +HALS+Q TPS+W SPPC GGSK
Sbjct: 3 VQHDLESRLSEALAPLHLEVLNESHKHSGPAGDSHFKVIAVSDHFEGQNRVARHRQINALLA-DLIGQPIHALSLQLFTPSEWAARAEVALPSPPCRGGSK 102 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig826.19662.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig826.19662.1 >prot_F-serratus_M_contig826.19662.1 ID=prot_F-serratus_M_contig826.19662.1|Name=mRNA_F-serratus_M_contig826.19662.1|organism=Fucus serratus male|type=polypeptide|length=167bp MSSPARRLLLGVCLVAQRSVSYHIPRAVPASPFSYARATSRSMGIFTQSRback to top mRNA from alignment at F-serratus_M_contig826:155553..164042+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig826.19662.1 ID=mRNA_F-serratus_M_contig826.19662.1|Name=mRNA_F-serratus_M_contig826.19662.1|organism=Fucus serratus male|type=mRNA|length=8490bp|location=Sequence derived from alignment at F-serratus_M_contig826:155553..164042+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig826:155553..164042+ >mRNA_F-serratus_M_contig826.19662.1 ID=mRNA_F-serratus_M_contig826.19662.1|Name=mRNA_F-serratus_M_contig826.19662.1|organism=Fucus serratus male|type=CDS|length=1002bp|location=Sequence derived from alignment at F-serratus_M_contig826:155553..164042+ (Fucus serratus male)back to top |