mRNA_F-serratus_M_contig818.19587.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig818.19587.1 vs. uniprot
Match: A0A6H5L399_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L399_9PHAE) HSP 1 Score: 149 bits (376), Expect = 5.400e-38 Identity = 74/91 (81.32%), Postives = 82/91 (90.11%), Query Frame = 3
Query: 318 ASALENRVIGAVAGGTGSLVTNPMDMILKTRMMTSPESYAGPIDAAWTALRKEGPQAFFKGATPKLLHKIPANALFFVAYEFFRTLLGVSR 590
A+ +EN VIGA+AGG GSLVTNPMDMI KTRMMTSPE YAGP+DAAW AL KEGPQAF KGATP+LLHKIPANA FFVAYEFFR++LGV+R
Sbjct: 399 ANPIENMVIGAIAGGMGSLVTNPMDMI-KTRMMTSPELYAGPMDAAWKALSKEGPQAFLKGATPRLLHKIPANAFFFVAYEFFRSILGVTR 488
BLAST of mRNA_F-serratus_M_contig818.19587.1 vs. uniprot
Match: A0A836CPL2_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPL2_9STRA) HSP 1 Score: 116 bits (291), Expect = 2.570e-27 Identity = 63/104 (60.58%), Postives = 76/104 (73.08%), Query Frame = 3
Query: 291 AARRRTSGGASA----LENRVIGAVAGGTGSLVTNPMDMILKTRMMTSPESYAGPIDAAWTALRKEGPQAFFKGATPKLLHKIPANALFFVAYEFFRTLLGVSR 590
AARRR + +A LE +IGA+AGG G+L TNPMD++ KTRMMT+P YA DAA LR +G +AF +GATP+LLHK+PAN LFF AYE FRTLLGV R
Sbjct: 180 AARRRAAARGAAKPSHLETMLIGAIAGGVGTLATNPMDVV-KTRMMTAPHLYASAWDAAVVTLRADGARAFARGATPRLLHKVPANGLFFAAYELFRTLLGVRR 282
BLAST of mRNA_F-serratus_M_contig818.19587.1 vs. uniprot
Match: A0A7S1BCN2_9STRA (Hypothetical protein n=3 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BCN2_9STRA) HSP 1 Score: 102 bits (254), Expect = 2.700e-21 Identity = 53/91 (58.24%), Postives = 66/91 (72.53%), Query Frame = 3
Query: 312 GGASALENRVIGAVAGGTGSLVTNPMDMILKTRMMTSPESYA-GPIDAAWTALRKEGPQAFFKGATPKLLHKIPANALFFVAYEFFRTLLG 581
G +SA N V GA AGG GS +TNPMD++ KTR+ TSPE Y G + A T L++EGP AF KG P+L+HKIPANA+FF+ YEFFR +L
Sbjct: 283 GASSAWRNMVTGATAGGIGSFLTNPMDVV-KTRLQTSPEIYGRGVLQCAMTTLQEEGPAAFLKGMRPRLMHKIPANAVFFLWYEFFRRVLN 372
BLAST of mRNA_F-serratus_M_contig818.19587.1 vs. uniprot
Match: W7TPC5_9STRA (Mitochondrial carrier n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPC5_9STRA) HSP 1 Score: 101 bits (252), Expect = 7.230e-21 Identity = 54/95 (56.84%), Postives = 68/95 (71.58%), Query Frame = 3
Query: 315 GASALENRVIGAVAGGTGSLVTNPMDMILKTRMMTSPESYAGPIDAAWTALRK----EGPQAFFKGATPKLLHKIPANALFFVAYEFFRTLLGVS 587
G++ALE+ V+GA+AGG GSLV+NPMD++ KTR+MT P Y W+A+ K EGP AFFKG P+LLHK+PANA+FF YE FR LL V
Sbjct: 335 GSTALEDSVMGALAGGVGSLVSNPMDVV-KTRVMTQPGLYP----TVWSAVSKVWVEEGPSAFFKGTVPRLLHKVPANAIFFATYEIFRGLLRVQ 424
BLAST of mRNA_F-serratus_M_contig818.19587.1 vs. uniprot
Match: A0A7S1Y570_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y570_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 2.430e-16 Identity = 47/90 (52.22%), Postives = 60/90 (66.67%), Query Frame = 3
Query: 321 SALENRVIGAVAGGTGSLVTNPMDMILKTRMMTSPESYAGPIDAAWTALRKEG-PQAFFKGATPKLLHKIPANALFFVAYEFFRTLLGVS 587
++L + GAVAGG GS VTNPMD+I KTR+ T + Y G I + EG P AF +G+ P+LLHK+PAN +FF+ YE FRTLL V
Sbjct: 170 TSLVDAFTGAVAGGVGSYVTNPMDVI-KTRLQTESQLYGGSIMKCFHDTWMEGGPSAFLRGSVPRLLHKVPANGIFFLFYELFRTLLRVE 258
BLAST of mRNA_F-serratus_M_contig818.19587.1 vs. uniprot
Match: A0A7S3V944_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V944_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 4.190e-16 Identity = 44/87 (50.57%), Postives = 60/87 (68.97%), Query Frame = 3
Query: 330 ENRVIGAVAGGTGSLVTNPMDMILKTRMMTSPESYAGPI-DAAWTALRKEGPQAFFKGATPKLLHKIPANALFFVAYEFFRTLLGVS 587
++ + G VAGG GS +TNPMD+I KTR+ + E Y+G + A L + GP AF +G+ P+L+HK+PANA FFV YEFFR +LG
Sbjct: 293 KDMIAGGVAGGMGSFMTNPMDVI-KTRLQVNSELYSGNVWVCASRTLEEGGPSAFLRGSVPRLIHKVPANACFFVFYEFFRRVLGAE 378
BLAST of mRNA_F-serratus_M_contig818.19587.1 vs. uniprot
Match: A0A7S1UWT0_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UWT0_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.110e-15 Identity = 47/90 (52.22%), Postives = 60/90 (66.67%), Query Frame = 3
Query: 321 SALENRVIGAVAGGTGSLVTNPMDMILKTRMMTSPESYAGPIDAAWTALRKEG-PQAFFKGATPKLLHKIPANALFFVAYEFFRTLLGVS 587
++L + GAVAGG GS VTNPMD+I KTR+ T + Y G I + EG P AF +G+ P+LLHK+PAN +FF+ YE FRTLL V
Sbjct: 336 TSLVDAFTGAVAGGVGSYVTNPMDVI-KTRLQTESQLYGGSIMKCFHDTWMEGGPSAFLRGSVPRLLHKVPANGIFFLFYELFRTLLRVE 424
BLAST of mRNA_F-serratus_M_contig818.19587.1 vs. uniprot
Match: A0A7S2V6F4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6F4_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 8.720e-15 Identity = 45/86 (52.33%), Postives = 59/86 (68.60%), Query Frame = 3
Query: 342 IGAVAGGTGSLVTNPMDMILKTRMMTSPESYAGPIDAAWTA---LRKEGPQAFFKGATPKLLHKIPANALFFVAYEFFRTLLGVSR 590
IG +AGG G+ +TNPMD++ KTR+MT+ GP TA L +EG F++GA P+LLH+IPANA+FF YE FR LLG+ R
Sbjct: 252 IGGIAGGVGTWMTNPMDVV-KTRIMTAAVGPQGPPLVTTTANKILAEEGLLGFYRGAVPRLLHRIPANAVFFPFYECFRDLLGIKR 336
BLAST of mRNA_F-serratus_M_contig818.19587.1 vs. uniprot
Match: A0A7S0AXI6_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AXI6_9STRA) HSP 1 Score: 80.9 bits (198), Expect = 2.580e-14 Identity = 41/79 (51.90%), Postives = 55/79 (69.62%), Query Frame = 3
Query: 345 GAVAGGTGSLVTNPMDMILKTRMMTSPESYAGPIDA-AWTALRKEGPQAFFKGATPKLLHKIPANALFFVAYEFFRTLL 578
GA+AGG GS +TNPMD++ KTR+ T PE Y G + A A + GP AF +G P+LLHK+PAN+LFF YE F+ ++
Sbjct: 169 GAIAGGVGSYLTNPMDVV-KTRLQTQPELYGGSMLACARDTFIEGGPAAFLRGCVPRLLHKVPANSLFFCFYEAFKRMM 246
BLAST of mRNA_F-serratus_M_contig818.19587.1 vs. uniprot
Match: A0A7S2R0R3_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R0R3_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 6.910e-14 Identity = 43/84 (51.19%), Postives = 56/84 (66.67%), Query Frame = 3
Query: 330 ENRVIGAVAGGTGSLVTNPMDMILKTRMMTSPESYAGPIDAAWTALRKEG-PQAFFKGATPKLLHKIPANALFFVAYEFFRTLL 578
++ V GA++GG G +TNPMD++ KTR+ PE Y G + A A EG +AF +G+ P+LLHKIPAN FFV YE FR LL
Sbjct: 124 KDMVAGAISGGLGGYLTNPMDVV-KTRLQIHPELYNGHVWACACATFDEGGARAFLRGSVPRLLHKIPANGCFFVFYELFRRLL 206 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig818.19587.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig818.19587.1 >prot_F-serratus_M_contig818.19587.1 ID=prot_F-serratus_M_contig818.19587.1|Name=mRNA_F-serratus_M_contig818.19587.1|organism=Fucus serratus male|type=polypeptide|length=69bp MDMILKTRMMTSPESYAGPIDAAWTALRKEGPQAFFKGATPKLLHKIPANback to top mRNA from alignment at F-serratus_M_contig818:69721..71142+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig818.19587.1 ID=mRNA_F-serratus_M_contig818.19587.1|Name=mRNA_F-serratus_M_contig818.19587.1|organism=Fucus serratus male|type=mRNA|length=1422bp|location=Sequence derived from alignment at F-serratus_M_contig818:69721..71142+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig818:69721..71142+ >mRNA_F-serratus_M_contig818.19587.1 ID=mRNA_F-serratus_M_contig818.19587.1|Name=mRNA_F-serratus_M_contig818.19587.1|organism=Fucus serratus male|type=CDS|length=414bp|location=Sequence derived from alignment at F-serratus_M_contig818:69721..71142+ (Fucus serratus male)back to top |