mRNA_F-serratus_M_contig804.19441.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig804.19441.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE) HSP 1 Score: 225 bits (574), Expect = 1.240e-66 Identity = 130/328 (39.63%), Postives = 189/328 (57.62%), Query Frame = 1
Query: 7 MVVVVHVDDILAYAKDQAMMDRFAAELGQKFRLKDMGDAEYCMGCHITRNRKARELKFDQHLYVESMVKRFDVKNKAKIPAASGVPMLSKADKPRNPKEKEEMKMFPYREAVGVLMRTATMTRPDIACAVRAVARFCENPGPAHKEAVMKIFQYLLHTKEWRIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLALTKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDAKPHLIRDASDAQRVRVAYVRSEDQQADLLTKPLDVQKFCKHAKFILNV 987
+++VVHVDDI A ++ D+F A+L + +K++G+ + GC RN++ L Q + + + + V +P +SGV LS D E FP+RE VG LM AT TRPDIA AVRAVAR+C +P H A M I Y T + I++ G G ++ Y D+DF + RRSVSG ++ GA+SW SR Q+ T+EAEYVAL +VVK++LFLRQ+ FM P + + + VFEDN+GAI+LA N ++ +KHID + H +R+ + + + V +V S Q+AD LTK L F H F++N+
Sbjct: 142 LILVVHVDDIFAVG-ERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFD------ADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFVMNL 461
BLAST of mRNA_F-serratus_M_contig804.19441.1 vs. uniprot
Match: A0A182H216_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182H216_AEDAL) HSP 1 Score: 216 bits (551), Expect = 8.470e-65 Identity = 131/329 (39.82%), Postives = 192/329 (58.36%), Query Frame = 1
Query: 13 VVVHVDDILAYAKDQAMMDRFAAELGQKFRLKDMGDAEYCMGCHITRNRKARELKFDQHLYVESMVKRFDVKN--KAKIPAASGVPMLSKADKPRNPKEKEEMKMFPYREAVGVLMRTATMTRPDIACAVRAVARFCENPGPAHKEAVMKIFQYLLHTKEWRIAYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLALTKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLRQV--QEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDAKPHLIRDASDAQRVRVAYVRSEDQQADLLTKPLDVQKFCKHAKFILNV 987
+ ++VDD L + D M R L +FR+KD+G A+YC+G I+RN++ EL DQ Y+E ++ RF++ + P S L K+ P++ E EEMK PY+EAVG L A TRPDI+ AV AV++F NPG H EAV +I +YL T R+ + +G G + YTD+D+G +D+RRS +G V GAISW+ + Q A + EAEY+ALS +++ L+ R + Q F E +++ F DN+ AI +A N + RTKH+D + H + DA D+ V + YV ++DQ AD TKPL VQ + K I+ +
Sbjct: 4 ITIYVDDFLIFTNDAKMRKRLKTFLCNRFRMKDLGQAKYCLGLQISRNKERGELSIDQRKYIEDVLDRFNLTDCHPVSTPFESSE-RLDKSMTPKSQDEIEEMKKVPYKEAVGCLQYIAQATRPDISFAVNAVSQFSSNPGRKHWEAVKRILRYLKGTINNRLLFNKRGNGEII-GYTDADWGGDVDSRRSTTGYVFMFQGGAISWNVKRQPTVALSSCEAEYMALSRTIQEALWWRNMLKQIFGETQIKI-----FCDNQSAISIAKNGSYNPRTKHVDIRYHFVHDAIDSGSVAINYVNTKDQAADGFTKPL-VQSGVTNMKRIIGI 324
BLAST of mRNA_F-serratus_M_contig804.19441.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 216 bits (551), Expect = 1.770e-63 Identity = 129/325 (39.69%), Postives = 188/325 (57.85%), Query Frame = 1
Query: 16 VVHVDDILAYAKDQAMMDRFAAELGQKFRLKDMGDAEYCMGCHITRNRKARELKFDQHLYVESMVKRFDVKNKAKIPAASGVPMLSKADKPRNPKEKEEMKMFPYREAVGVLMRTATMTRPDIACAVRAVARFCENPGPAHKEAVMKIFQYLLHTKEWRIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLALTKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDAKPHLIRDASDAQRVRVAYVRSEDQQADLLTKPLDVQKFCKHAKFILNV 987
VVHVDDI + +++ D+F +L +K++GD + GC R+ A LK Q Y E + F V+ +IP G+ LS+ D + EE+ +P+RE +G LM AT TRPDIA AVRAVAR+C +P H A + I Y++ T + I + G GL ME + D+D+ + RRSVSG ++ G ISW SR Q+ T+EAEYV+L++V+K+VLFLRQV FM P + + VFEDN+GAI+LA N ++ +KHID + H IR+ + + + +V S Q AD LTK L F H +++++
Sbjct: 121 VVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYVMSM 437
BLAST of mRNA_F-serratus_M_contig804.19441.1 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE) HSP 1 Score: 225 bits (574), Expect = 1.330e-62 Identity = 130/328 (39.63%), Postives = 189/328 (57.62%), Query Frame = 1
Query: 7 MVVVVHVDDILAYAKDQAMMDRFAAELGQKFRLKDMGDAEYCMGCHITRNRKARELKFDQHLYVESMVKRFDVKNKAKIPAASGVPMLSKADKPRNPKEKEEMKMFPYREAVGVLMRTATMTRPDIACAVRAVARFCENPGPAHKEAVMKIFQYLLHTKEWRIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLALTKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDAKPHLIRDASDAQRVRVAYVRSEDQQADLLTKPLDVQKFCKHAKFILNV 987
+++VVHVDDI A ++ D+F A+L + +K++G+ + GC RN++ L Q + + + + V +P +SGV LS D E FP+RE VG LM AT TRPDIA AVRAVAR+C +P H A M I Y T + I++ G G ++ Y D+DF + RRSVSG ++ GA+SW SR Q+ T+EAEYVAL +VVK++LFLRQ+ FM P + + + VFEDN+GAI+LA N ++ +KHID + H +R+ + + + V +V S Q+AD LTK L F H F++N+
Sbjct: 1478 LILVVHVDDIFAVG-ERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFD------ADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFVMNL 1797
BLAST of mRNA_F-serratus_M_contig804.19441.1 vs. uniprot
Match: A0A6H5JG40_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG40_9PHAE) HSP 1 Score: 225 bits (573), Expect = 1.610e-62 Identity = 129/328 (39.33%), Postives = 189/328 (57.62%), Query Frame = 1
Query: 7 MVVVVHVDDILAYAKDQAMMDRFAAELGQKFRLKDMGDAEYCMGCHITRNRKARELKFDQHLYVESMVKRFDVKNKAKIPAASGVPMLSKADKPRNPKEKEEMKMFPYREAVGVLMRTATMTRPDIACAVRAVARFCENPGPAHKEAVMKIFQYLLHTKEWRIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLALTKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDAKPHLIRDASDAQRVRVAYVRSEDQQADLLTKPLDVQKFCKHAKFILNV 987
+++VVHVDDI A ++ D+F A+L + +K++G+ + GC RN++ L Q + + + + V +P +SGV LS D E FP+RE VG LM AT TRPDIA AVRAVAR+C +P H A M I Y T + I++ G G ++ Y D+DF + RRSVSG ++ GA+SW SR Q+ T+EAEYVAL +VVK++LFLRQ+ FM P + + + +FEDN+GAI+LA N ++ +KHID + H +R+ + + + V +V S Q+AD LTK L F H F++N+
Sbjct: 972 LILVVHVDDIFAVG-ERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFD------ADEVATDFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSKDAFESHRDFVMNL 1291
BLAST of mRNA_F-serratus_M_contig804.19441.1 vs. uniprot
Match: A0A6G0MK94_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=A0A6G0MK94_9STRA) HSP 1 Score: 213 bits (543), Expect = 2.530e-62 Identity = 126/315 (40.00%), Postives = 195/315 (61.90%), Query Frame = 1
Query: 4 EMVVVVHVDDILAYAKDQAMMDRFAAELGQKFRLKDMGDAEYCMGCHITRNRKARELKFDQHLYVESMVKRFDVKNKAK--IPAASGVPMLSKADKPRNPKEKEEMKMFPYREAVGVLMRTATMTRPDIACAVRAVARFCENPGPAHKEAVMKIFQYLLHTKEWRIAYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLALTKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDAKPHLIRDASDAQRVRVAYVRSEDQQADLLTKPL 942
E +V ++VDD+L ++ +A++ A + +KFR+KD+G A + +G I + + R L Q Y ES++K+F +N P GV L+KAD+P+ ++K +MK PYR VG LM A TRPDI+ AV ++RF ENPG H +A +K+ +YLL TK+ I Y G G +EAY+D+++ D RRSVSG +L L + W S Q+ A ++EAEY+ALS+ VK+ +++R++ + + +VGA+ ++EDN+GA+ LA N RTKHID + H IR+ + V + YV +++Q AD +TK L
Sbjct: 102 ECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPWLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDANWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAE-QVGAMVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKVVSSEVELEYVDTKNQLADFMTKGL 413
BLAST of mRNA_F-serratus_M_contig804.19441.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE) HSP 1 Score: 216 bits (551), Expect = 7.940e-62 Identity = 129/325 (39.69%), Postives = 188/325 (57.85%), Query Frame = 1
Query: 16 VVHVDDILAYAKDQAMMDRFAAELGQKFRLKDMGDAEYCMGCHITRNRKARELKFDQHLYVESMVKRFDVKNKAKIPAASGVPMLSKADKPRNPKEKEEMKMFPYREAVGVLMRTATMTRPDIACAVRAVARFCENPGPAHKEAVMKIFQYLLHTKEWRIAYG-GQGCGLCMEAYTDSDFGACLDTRRSVSGAVLALTKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDAKPHLIRDASDAQRVRVAYVRSEDQQADLLTKPLDVQKFCKHAKFILNV 987
VVHVDDI + +++ D+F +L +K++GD + GC R+ A LK Q Y E + F V+ +IP G+ LS+ D + EE+ +P+RE +G LM AT TRPDIA AVRAVAR+C +P H A + I Y++ T + I + G GL ME + D+D+ + RRSVSG ++ G ISW SR Q+ T+EAEYV+L++V+K+VLFLRQV FM P + + VFEDN+GAI+LA N ++ +KHID + H IR+ + + + +V S Q AD LTK L F H +++++
Sbjct: 295 VVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYVMSM 611
BLAST of mRNA_F-serratus_M_contig804.19441.1 vs. uniprot
Match: A0A6A3Q8N8_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=6 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3Q8N8_9STRA) HSP 1 Score: 215 bits (547), Expect = 4.130e-61 Identity = 126/315 (40.00%), Postives = 192/315 (60.95%), Query Frame = 1
Query: 4 EMVVVVHVDDILAYAKDQAMMDRFAAELGQKFRLKDMGDAEYCMGCHITRNRKARELKFDQHLYVESMVKRFDVKNKAKI--PAASGVPMLSKADKPRNPKEKEEMKMFPYREAVGVLMRTATMTRPDIACAVRAVARFCENPGPAHKEAVMKIFQYLLHTKEWRIAYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLALTKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDAKPHLIRDASDAQRVRVAYVRSEDQQADLLTKPL 942
E +V ++VD++L ++ +A++ A + +KFR+KD+G A + +G I N + R L Q Y ES++K F +N P GV L+KAD+P+ ++K +MK PYR VG LM A TRPD++ AV ++RF ENPG H ++ +K +YLL TK+ I Y GQ G +EAY+D+D+ D RRSVSG +L L + W S Q+ A ++EAEY+ALS+ VK+ +++R++ + + +VGA ++EDN+GA+ LA N RTKHID + H IR+ V + YV +++Q AD +TK L
Sbjct: 296 ECIVCLYVDNMLIASRQKAVITSVKAGIAEKFRIKDLGRARFILGIEIDYNMERRTLGISQKAYTESIIKTFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSVVGSLMYLACGTRPDVSVAVAKLSRFLENPGEKHWDSGIKAVRYLLKTKDVGIVYDGQ-LGTHLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAE-QVGATEIYEDNQGAMALAKNVGYQARTKHIDIRYHFIREKVVGNEVELEYVDTKNQLADFMTKGL 607
BLAST of mRNA_F-serratus_M_contig804.19441.1 vs. uniprot
Match: A0A6A3YGI7_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=11 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YGI7_9STRA) HSP 1 Score: 219 bits (558), Expect = 4.770e-61 Identity = 127/315 (40.32%), Postives = 197/315 (62.54%), Query Frame = 1
Query: 4 EMVVVVHVDDILAYAKDQAMMDRFAAELGQKFRLKDMGDAEYCMGCHITRNRKARELKFDQHLYVESMVKRFDVKNKAKI--PAASGVPMLSKADKPRNPKEKEEMKMFPYREAVGVLMRTATMTRPDIACAVRAVARFCENPGPAHKEAVMKIFQYLLHTKEWRIAYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLALTKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDAKPHLIRDASDAQRVRVAYVRSEDQQADLLTKPL 942
E +V ++VDD+L ++ A++ A + +KFR+KDMG A + +G I + + R L Q Y ES++K+F +N P GV L+KAD+P+ ++K +MK+ PYR VG LM A TRPDI+ AV ++RF ENPG H +A +K+ +YLL TK+ I Y G G +EAY+D+D+ D RRSVSG +L L + + W S Q+ A ++EAEY+ALS+ VK+ +++R++ + + +VGA ++EDN+GA+ LA N RTKHID + H +R+ + + V++ YV +++Q AD +TK L
Sbjct: 594 ECIVCLYVDDMLIASRQMAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKLKPYRSLVGSLMYLARGTRPDISVAVAKLSRFPENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGAQLEAYSDADWAGNRDDRRSVSGMLLMLCRAPVVWRSTFQKTVALSSTEAEYLALSDCVKECVWMRRLLKDIGAE-QVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFVREKAVSNEVKLEYVDTKNQLADFMTKGL 905
BLAST of mRNA_F-serratus_M_contig804.19441.1 vs. uniprot
Match: A0A6A3DSS8_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A6A3DSS8_9STRA) HSP 1 Score: 215 bits (548), Expect = 5.130e-61 Identity = 127/315 (40.32%), Postives = 195/315 (61.90%), Query Frame = 1
Query: 4 EMVVVVHVDDILAYAKDQAMMDRFAAELGQKFRLKDMGDAEYCMGCHITRNRKARELKFDQHLYVESMVKRFDVKNKAKI--PAASGVPMLSKADKPRNPKEKEEMKMFPYREAVGVLMRTATMTRPDIACAVRAVARFCENPGPAHKEAVMKIFQYLLHTKEWRIAYGGQGCGLCMEAYTDSDFGACLDTRRSVSGAVLALTKGAISWHSRMQEVTASGTSEAEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDAKPHLIRDASDAQRVRVAYVRSEDQQADLLTKPL 942
E +V ++VDD+L ++ +A++ A + +KFR+KDMG A + +G I + + R L Q Y ES++K+F +N P GV L+KAD+P+ ++K +MK PYR VG LM + TRPDI+ AV ++RF ENPG H +A +K+ +YLL TK+ I Y G G +EAY+D+D+ D RRSVSG +L L + W S Q+ A ++EAEY+ALS+ VK+ +++R++ + + +VGA ++EDN+GA+ LA N TKHID + H IRD + + V++ YV +++Q AD +TK L
Sbjct: 328 ECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLSCGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNWDDRRSVSGMLLMLCGAPVVWRSSFQKTVALSSTEAEYMALSDCVKECVWMRRLIKDIGAE-QVGATVIYEDNQGAMALAKNVGYQAGTKHIDIRYHFIRDKAVSNEVKLEYVDTKNQLADFMTKGL 639 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig804.19441.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig804.19441.1 >prot_F-serratus_M_contig804.19441.1 ID=prot_F-serratus_M_contig804.19441.1|Name=mRNA_F-serratus_M_contig804.19441.1|organism=Fucus serratus male|type=polypeptide|length=329bp MVVVVHVDDILAYAKDQAMMDRFAAELGQKFRLKDMGDAEYCMGCHITRNback to top mRNA from alignment at F-serratus_M_contig804:260195..261187+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig804.19441.1 ID=mRNA_F-serratus_M_contig804.19441.1|Name=mRNA_F-serratus_M_contig804.19441.1|organism=Fucus serratus male|type=mRNA|length=993bp|location=Sequence derived from alignment at F-serratus_M_contig804:260195..261187+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig804:260195..261187+ >mRNA_F-serratus_M_contig804.19441.1 ID=mRNA_F-serratus_M_contig804.19441.1|Name=mRNA_F-serratus_M_contig804.19441.1|organism=Fucus serratus male|type=CDS|length=1974bp|location=Sequence derived from alignment at F-serratus_M_contig804:260195..261187+ (Fucus serratus male)back to top |