mRNA_F-serratus_M_contig797.19273.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig797.19273.1
Unique NamemRNA_F-serratus_M_contig797.19273.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig797.19273.1 vs. uniprot
Match: D8LFS4_ECTSI (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFS4_ECTSI)

HSP 1 Score: 300 bits (767), Expect = 4.030e-96
Identity = 156/236 (66.10%), Postives = 184/236 (77.97%), Query Frame = 2
Query:  158 GSTTPAFTERSSVILLFGIFCVLPLSLLKDLSKLSYTSFASVMADLLLTFIVIFAGAKEARENLDLDGLPKLTFVRPTVFAGFGAISFAFVCQSSSFLVYRSMAKGGLNRWAAVTKWSGTIALLMGLTLALGGYLNFGRETQGNILNNFSEDNAAASVARAFLAITMVFTYPMEMYVTRHVIDFAVFQTLLGMGPPTAARHYGITMVLWVLTIILATSTDDLGDILR-FSAPSARA 862
            G+T   F +R +VI +FGIF VLPLSLLKDLSKL+YTS  SV+AD+ LT IV FAGA EA  N D+D   +  F+RPTVFAGFGAISFAFV QS+SFLVYRSM+KGG++RWA VT+WS +IAL +GLTLAL GYLNF  ET  NILNN    +  A++ARAFLA+TMVFTYPMEMYV RH +D AVFQT LG GP T ARH+GI++ LWVL+I+LA ST +LG IL  F A SA A
Sbjct:  155 GTTNGPFADRHAVIFMFGIFVVLPLSLLKDLSKLAYTSGISVLADVFLTLIVFFAGAGEASTNDDIDSSERFVFIRPTVFAGFGAISFAFVSQSASFLVYRSMSKGGVDRWACVTRWSVSIALGLGLTLALSGYLNFVNETDANILNNLGTRHGPANIARAFLALTMVFTYPMEMYVARHALDVAVFQTWLGKGPTTQARHFGISIALWVLSIVLAASTKNLGSILEIFGAFSANA 390          
BLAST of mRNA_F-serratus_M_contig797.19273.1 vs. uniprot
Match: D8LFS5_ECTSI (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFS5_ECTSI)

HSP 1 Score: 277 bits (709), Expect = 2.070e-87
Identity = 142/236 (60.17%), Postives = 182/236 (77.12%), Query Frame = 2
Query:  158 GSTTPAFTERSSVILLFGIFCVLPLSLLKDLSKLSYTSFASVMADLLLTFIVIFAGAKEARENLDLDGLPKLTFVRPTVFAGFGAISFAFVCQSSSFLVYRSMAKGGLNRWAAVTKWSGTIALLMGLTLALGGYLNFGRETQGNILNNFSEDNAAASVARAFLAITMVFTYPMEMYVTRHVIDFAVFQTLLGMGPPTAARHYGITMVLWVLTIILATSTDDLGDILR-FSAPSARA 862
            G  T A  +R+SVI + G+FC+LPLSLLKDLSKL+YTS  SV+AD+LLT IV+   +  ARE  D+D     TF+RPT+FAGFGAISF+FVCQ SSFLVYRSM++ G++RWA VT+W+ +IAL+M LTL + GYL+F   T+GNILNNF+ ++  A+VARAFLA+TMV TYP+EMYV RHV+D ++FQT LG GP T  RHY IT+++WVLT+ LA ST +LG +L  F A  A A
Sbjct:  154 GIDTGALADRASVIGIVGVFCMLPLSLLKDLSKLAYTSCLSVLADVLLTVIVLVGASGAARELPDVDRSDVNTFIRPTIFAGFGAISFSFVCQHSSFLVYRSMSERGVDRWATVTRWAVSIALVMSLTLGVAGYLSFADGTEGNILNNFTHEHRPATVARAFLALTMVLTYPLEMYVARHVLDASLFQTCLGKGPITTVRHYWITVIIWVLTLTLALSTANLGSVLEIFGAFGASA 389          
BLAST of mRNA_F-serratus_M_contig797.19273.1 vs. uniprot
Match: A0A836CLI3_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLI3_9STRA)

HSP 1 Score: 177 bits (449), Expect = 1.810e-48
Identity = 100/229 (43.67%), Postives = 134/229 (58.52%), Query Frame = 2
Query:  158 GSTTPAFTERSSVILLFGIFCVLPLSLLKDLSKLSYTSFASVMADLLLTFIVIFAGAKEARENLDLDGLPKLTFVRPTVFAGFGAISFAFVCQSSSFLVYRSMAKGGLN--RWAAVTKWSGTIALLMGLTLALGGYLNFGRETQGNILNNFSEDNAAASVARAFLAITMVFTYPMEMYVTRHVIDFAVFQTLLGMGPPTAARHYGITMVLWVLTIILATSTDDLGDILR 838
            G  + A T+R  VI L  +  VLP+S  +DL                     +FA   E R    +D     TF R T+FAG GAISFAFVCQSS+F+VYRS+ +G  +   W ++T  S +IA  M + +A  GYL+FG +T+G+ILNNFS   AAA+ ARAFLA+ M+ TYPMEM V RHV+D +V + LL        RH  IT+++W  T + A +TDDLG +L 
Sbjct:  189 GVASGALTDRRVVIALLSLLVVLPVSSFRDLHXXXXXXXXXXXXXXXXXXXXVFAAPAEGRTYDTIDRTDIFTFARGTLFAGLGAISFAFVCQSSTFIVYRSLGEGARSVASWTSITHMSLSIAWAMTMAMATLGYLSFGDQTRGDILNNFSARGAAAAAARAFLAVAMLLTYPMEMVVARHVLDASVCRALLRWEEARLGRHMVITILIWAATTVTALATDDLGAVLE 417          
BLAST of mRNA_F-serratus_M_contig797.19273.1 vs. uniprot
Match: A0A2R5GEI9_9STRA (Amino acid transporter, putative n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GEI9_9STRA)

HSP 1 Score: 161 bits (407), Expect = 3.180e-42
Identity = 91/229 (39.74%), Postives = 141/229 (61.57%), Query Frame = 2
Query:  179 TERSSVILLFGIFCVLPLSLLKDLSKLSYTSFASVMADLLLTFIVIFAGAKEARENLDLDG---LPKLTFVRPTVFAGFGAISFAFVCQSSSFLVYRSMAKGGLNRWAAVTKWSGTIALLMGLTLALGGYLNFGRETQGNILNNFSEDNAAASVARAFLAITMVFTYPMEMYVTRHVIDFAVFQ----TLLGMGPPTAARHYGITMVLWVLTIILATSTDDLGDILRFS 844
            ++R  V+ LF +  +LPLSLL+D++ LS++S  S+ AD ++  +VI   A    E  + D     P+ TF   ++FAGFGAISFA+VCQ SSF+V+ ++       W  V   + + A++M + L+L GYL F  +T  NILNNF  ++  ++VAR  LA+TMVFT+PME +V RH + FA++     TL G    ++A H+G+T+ LW +  I+  +  DLG I+  +
Sbjct:  200 SDRRLVVFLFALVIILPLSLLRDMAALSWSSSLSITADGIIVLLVIARAAYGVSEWPEADRGPIEPEFTFANSSIFAGFGAISFAYVCQHSSFIVFNTLKVPTTREWDRVNTGAVSTAMIMSVLLSLAGYLAFFNQTLPNILNNFPCNDNVSNVARFLLALTMVFTFPMENFVARHSL-FAIYHGFSPTLKGSRRMSSAWHFGLTLGLWGVATIIGVAVTDLGIIIELT 427          
BLAST of mRNA_F-serratus_M_contig797.19273.1 vs. uniprot
Match: A0A7R9ZUM1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia arenysensis TaxID=697910 RepID=A0A7R9ZUM1_9STRA)

HSP 1 Score: 148 bits (374), Expect = 5.610e-37
Identity = 94/249 (37.75%), Postives = 141/249 (56.63%), Query Frame = 2
Query:  176 FTERSSVILLFGIFCVLPLSLLKDLSKLSYTSFASVMADLLLT-FIVIFAGAKEARENLD-LDGLPKLTFVRPTVFAGFGAISFAFVCQSSSFLVYRSMAKGGLNRWAAVTKWSGTIALLMGLTLALGGYLNFGRETQGNILNNFSEDNAAASVARAFLAITMVFTYPMEMYVTRHVI---------DFAVFQTLLGMGPPTA---------------ARHYGITMVLWVLTIILATSTDDLGDILRFS 844
            F ER  V+LL  +  V+PLS+ +D S LS+TS  SV ADLLL  F+ ++A   E+  N   L  + K + +    F GFG ++ A  CQ S+F+V  S+      RW+ VT  S +++++  L L + GYL F  ET G++LNNF  D A+A+ ARA LAITM FTYPME +V RHV+         D  +F+T++   P T                +R + +T+++++LT++ A   DDLG +L  +
Sbjct:  177 FVERELVMLLTSLTVVVPLSMQRDFSSLSFTSTISVAADLLLVVFVAVYAPIGESIANEGGLGNIIKNSIIDKGFFIGFGVLTVAMCCQHSAFIVASSLDNPTPKRWSIVTAVSLSVSVVCCLVLGVAGYLGFLDETSGDVLNNFEVDTASANFARALLAITMFFTYPMEAFVARHVLVQLLWKGDLDGYIFETIVD--PDTGEERSTQRKAKRCRCLSRRHQVTLLIYLLTLMPALIVDDLGPVLSIT 423          
BLAST of mRNA_F-serratus_M_contig797.19273.1 vs. uniprot
Match: A0A1Y1XCT7_9FUNG (Aa_trans domain-containing protein n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1XCT7_9FUNG)

HSP 1 Score: 144 bits (362), Expect = 1.170e-36
Identity = 87/235 (37.02%), Postives = 138/235 (58.72%), Query Frame = 2
Query:  179 TERSSVILLFGIFCVLPLSLLKDLSKLSYTSFASVMADLLLTFIVIFAGAKEARENLDLDGLPKLTFVRPTVFAGFGAISFAFVCQSSSFLVYRSMAKGGLNRWAAVTKWSGTIALLMGLTLALGGYLNFGRETQGNILNNFSEDNAAASVARAFLAITMVFTYPMEMYVTRHVI-DFAVFQTLLGMGPPTAAR------------HYGITMVLWVLTIILATSTDDLGDILRFS 844
            T R+++I L     +LPLSL +D+SKLS TSF S++  +++TF VI+ G K  +E L  D   +LTF+   +F   G ISFAFVC  +S L+  S+ K  ++R+A VT  S   + ++ + +ALGGYL F  +T+GNILNNF +D+   + +R   AI M  T P+E +V R VI +     +++G G   ++R            H+ +T+ L + ++ +A + DDLG +L  +
Sbjct:  101 TSRNAIICLTTFLVILPLSLNRDISKLSKTSFLSLIGIMIITFAVIWEGLKVPKE-LKGDPNQRLTFINKDIFQCIGVISFAFVCHHNSLLILGSLKKPSMDRFATVTHLSTGWSFVVSVAIALGGYLVFTDKTKGNILNNFPQDSLLINFSRLLFAINMFLTSPLECFVCREVILNLLNPNSVIGGGENLSSRQTKENQLFGGIEHFIVTLALILCSLYIALTIDDLGFVLEIT 334          
BLAST of mRNA_F-serratus_M_contig797.19273.1 vs. uniprot
Match: A0A1Y1V7P7_9FUNG (Aa_trans domain-containing protein n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1V7P7_9FUNG)

HSP 1 Score: 142 bits (358), Expect = 3.280e-35
Identity = 85/235 (36.17%), Postives = 136/235 (57.87%), Query Frame = 2
Query:  179 TERSSVILLFGIFCVLPLSLLKDLSKLSYTSFASVMADLLLTFIVIFAGAKEARENLDLDGLPKLTFVRPTVFAGFGAISFAFVCQSSSFLVYRSMAKGGLNRWAAVTKWSGTIALLMGLTLALGGYLNFGRETQGNILNNFSEDNAAASVARAFLAITMVFTYPMEMYVTRHVI-DFAVFQTLLGMGPPTAAR------------HYGITMVLWVLTIILATSTDDLGDILRFS 844
            T R+ +I L     +LPLSL +D+SKLS TSF S++  +++T  VI+ G K  +E L  D   ++TF+   +F   G ISFAFVC  +S L+  S+ K  +NR+A VT  S   + L+ + +ALGGYL F  +T+GNILNNF +D+   +++R   A  M  T P+E +V R VI +     +++G G    ++            H+ +T++L + ++ +A + DDLG +L  +
Sbjct:  230 TSRNFIICLTTFLIILPLSLNRDISKLSKTSFLSLLGIMIITISVIYEGIKVPKE-LKGDPNQRITFIHKDIFQCIGVISFAFVCHHNSLLILGSLKKPSMNRFATVTHLSTGWSFLVSIAIALGGYLVFTDKTKGNILNNFPQDSHLINISRILFAFNMFLTSPLECFVCREVILNLLNPNSVIGGGENLNSKETKENKLFGDIEHFIVTLILVLCSLYIALTIDDLGFVLEIT 463          
BLAST of mRNA_F-serratus_M_contig797.19273.1 vs. uniprot
Match: A0A7S4QR31_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QR31_9STRA)

HSP 1 Score: 139 bits (351), Expect = 1.110e-34
Identity = 85/233 (36.48%), Postives = 128/233 (54.94%), Query Frame = 2
Query:  194 VILLFGIFCVLPLSLLKDLSKLSYTSFASVMADLLLTFIVIFAGA--KEARENLDLDGLPKLTFVRPTVFAGFGAISFAFVCQSSSFLVYRSMAKGGLNRWAAVTKWSGTIALLMGLTLALGGYLNFGRETQGNILNNFSEDNAAASVARAFLAITMVFTYPMEMYVTRHVIDFAVFQTLL----------GMGPPTAA----RHYGITMVLWVLTIILATSTDDLGDILRFS 844
            V+++   F +LPLS+ +D++ LS TS  SV  D++L F V+      K   E   +  + K   + P +F G G +S A  CQ SSFL++ S+      RWA V+  S + +  + L L + G+L FG ETQG++LNNF E +  A+VAR  LAITM+FTYPME++V RHV+      + +          G G         R   +T+ L++LT++ A   DDLG +L  +
Sbjct:   51 VLIVISAFLILPLSMQRDIASLSVTSLLSVTLDIVLVFFVVLYSPVIKNVSEQGGIAQIIKNDAISPNIFIGLGVLSDAMCCQHSSFLLFESLENHKRIRWATVSAISISTSAFLFLILGVSGFLGFGDETQGDVLNNFPEGSMEANVARGLLAITMIFTYPMELFVGRHVLVDLFHNSQIECPISELQDRGEGSFLQRIMLNRRQKMTLGLYMLTLVPALFFDDLGPVLSIT 283          
BLAST of mRNA_F-serratus_M_contig797.19273.1 vs. uniprot
Match: U9U1Q1_RHIID (Aa_trans domain-containing protein n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=U9U1Q1_RHIID)

HSP 1 Score: 137 bits (346), Expect = 2.490e-34
Identity = 91/224 (40.62%), Postives = 125/224 (55.80%), Query Frame = 2
Query:  176 FTERSSVILLFGIFCVLPLSLLKDLSKLSYTS-FASVMADLLLTFIVIFAGAKEARENLDLDGLPKLTFVRPTVFAGFGAISFAFVCQSSSFLVYRSMAKGGLNRWAAVTKWSGTIALLMGLTLALGGYLNFGRETQGNILNNFSEDNAAASVARAFLAITMVFTYPMEMYVTRHVIDFAVFQTLLGMGPPTAARHYGITMVLWVLTIILATSTDDLGDILRFS 844
            FT+R  VI+   IF   PLSL +D+SKLS  S  A V   +++T +VI   A +  + L        TFV+P +F   G ISFAFVC  +S L++ S+ K  LNR+AAVT  S  I++L  L +AL GYL F  +T+GNILNNF +DN   ++AR      M  T P+E +V R  I+   F       P +  RH   T VL V  +I++  T DLG +L  +
Sbjct:  118 FTDRYFVIMFCTIFISYPLSLYRDISKLSKASGLALVSMTVIVTSVVI--EAPQVDQKLRGSSEETWTFVQPQIFQSIGIISFAFVCHHNSLLIFDSLRKPTLNRFAAVTHLSTGISMLACLLVALVGYLVFTDKTEGNILNNFPKDNVIINIARFCFGFNMFTTLPLEAFVCRESIEIYYFSN----APFSMKRHVISTTVLVVCAMIVSLLTSDLGIVLELT 335          
BLAST of mRNA_F-serratus_M_contig797.19273.1 vs. uniprot
Match: A0A7S1URN2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1URN2_9STRA)

HSP 1 Score: 139 bits (350), Expect = 3.890e-34
Identity = 89/239 (37.24%), Postives = 135/239 (56.49%), Query Frame = 2
Query:  173 AFTERSSVILLFGIFCVLPLSLLKDLSKLSYTSFASVMADLLLT-FIVIFAGAKEARENLDLDGLPKLT---FVRPTVFAGFGAISFAFVCQSSSFLVYRSMAKGGLNRWAAVTKWSGTIALLMGLTLALGGYLNFGRETQGNILNNFSEDNAAASVARAFLAITMVFTYPMEMYVTRHVIDFAVFQTLLG--MGPPTAA---------RHYGITMVLWVLTIILATSTDDLGDILRFS 844
            +F ER  V++   +  +LPLSL +D++ L+ TS  SV AD++L  F+  F+  K      D  G  ++    ++ PT+F G G +S A  CQ S+F+V  S+ K  + RW +VT  S + A ++ L L + GYL F  ET+G++LNNF   +  ++ ARA LAITM FTYPME +V RHV    ++   +   + P T A         R Y +T+ ++ LT+I A   DDLG +L  +
Sbjct:  114 SFVEREMVMIATSLIVILPLSLQRDMASLAVTSLLSVTADVILVGFVAAFSPIKST--VADAGGFGEVLRDDWLNPTLFVGLGIVSTAMACQHSAFIVSGSLQKITVKRWGSVTFRSISCATILCLILGVCGYLGFLDETEGDVLNNFPAHSRESNGARALLAITMFFTYPMEAFVARHVFVKLMYNGNMDGEVVPETGAFRPEFLCFSRRYFLTLGIYALTLIPALLLDDLGPVLSIT 350          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig797.19273.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFS4_ECTSI4.030e-9666.10Aa_trans domain-containing protein n=2 Tax=Ectocar... [more]
D8LFS5_ECTSI2.070e-8760.17Aa_trans domain-containing protein n=2 Tax=Ectocar... [more]
A0A836CLI3_9STRA1.810e-4843.67Transmembrane amino acid transporter protein-domai... [more]
A0A2R5GEI9_9STRA3.180e-4239.74Amino acid transporter, putative n=1 Tax=Hondaea f... [more]
A0A7R9ZUM1_9STRA5.610e-3737.75Hypothetical protein n=1 Tax=Pseudo-nitzschia aren... [more]
A0A1Y1XCT7_9FUNG1.170e-3637.02Aa_trans domain-containing protein n=1 Tax=Anaerom... [more]
A0A1Y1V7P7_9FUNG3.280e-3536.17Aa_trans domain-containing protein n=1 Tax=Piromyc... [more]
A0A7S4QR31_9STRA1.110e-3436.48Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
U9U1Q1_RHIID2.490e-3440.63Aa_trans domain-containing protein n=2 Tax=Rhizoph... [more]
A0A7S1URN2_9STRA3.890e-3437.24Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig797contigF-serratus_M_contig797:371830..373568 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score251.9
Seed ortholog evalue2.4e-64
Seed eggNOG ortholog2880.D8LFS4
Preferred nameSLC38A11
KEGG koko:K14997
KEGG TC2.A.18.6
Hectar predicted targeting categorysignal peptide
GOsGO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0012505,GO:0015075,GO:0015171,GO:0015318,GO:0015711,GO:0015849,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0034220,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0098656,GO:1903825,GO:1905039
EggNOG free text desc.amino acid
EggNOG OGsCOG0814@1,KOG1305@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Exons3
Model size865
Cds size582
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig797.19273.1prot_F-serratus_M_contig797.19273.1Fucus serratus malepolypeptideF-serratus_M_contig797 371830..373285 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932367.9818795-CDS-F-serratus_M_contig797:371829..3720361622932367.9818795-CDS-F-serratus_M_contig797:371829..372036Fucus serratus maleCDSF-serratus_M_contig797 371830..372036 -
1690964274.326263-CDS-F-serratus_M_contig797:371829..3720361690964274.326263-CDS-F-serratus_M_contig797:371829..372036Fucus serratus maleCDSF-serratus_M_contig797 371830..372036 -
1622932368.0060508-CDS-F-serratus_M_contig797:372265..3725841622932368.0060508-CDS-F-serratus_M_contig797:372265..372584Fucus serratus maleCDSF-serratus_M_contig797 372266..372584 -
1690964274.344862-CDS-F-serratus_M_contig797:372265..3725841690964274.344862-CDS-F-serratus_M_contig797:372265..372584Fucus serratus maleCDSF-serratus_M_contig797 372266..372584 -
1622932368.028687-CDS-F-serratus_M_contig797:373229..3732851622932368.028687-CDS-F-serratus_M_contig797:373229..373285Fucus serratus maleCDSF-serratus_M_contig797 373230..373285 -
1690964274.3566093-CDS-F-serratus_M_contig797:373229..3732851690964274.3566093-CDS-F-serratus_M_contig797:373229..373285Fucus serratus maleCDSF-serratus_M_contig797 373230..373285 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932368.0572684-UTR-F-serratus_M_contig797:373285..3735681622932368.0572684-UTR-F-serratus_M_contig797:373285..373568Fucus serratus maleUTRF-serratus_M_contig797 373286..373568 -
1690964274.366103-UTR-F-serratus_M_contig797:373285..3735681690964274.366103-UTR-F-serratus_M_contig797:373285..373568Fucus serratus maleUTRF-serratus_M_contig797 373286..373568 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig797.19273.1

>prot_F-serratus_M_contig797.19273.1 ID=prot_F-serratus_M_contig797.19273.1|Name=mRNA_F-serratus_M_contig797.19273.1|organism=Fucus serratus male|type=polypeptide|length=194bp
MADLLLTFIVIFAGAKEARENLDLDGLPKLTFVRPTVFAGFGAISFAFVC
QSSSFLVYRSMAKGGLNRWAAVTKWSGTIALLMGLTLALGGYLNFGRETQ
GNILNNFSEDNAAASVARAFLAITMVFTYPMEMYVTRHVIDFAVFQTLLG
MGPPTAARHYGITMVLWVLTIILATSTDDLGDILRFSAPSARA*
back to top

mRNA from alignment at F-serratus_M_contig797:371830..373568-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig797.19273.1 ID=mRNA_F-serratus_M_contig797.19273.1|Name=mRNA_F-serratus_M_contig797.19273.1|organism=Fucus serratus male|type=mRNA|length=1739bp|location=Sequence derived from alignment at F-serratus_M_contig797:371830..373568- (Fucus serratus male)
ACCGGGCGCCTAAACTACGAGGAGATGATGGGAGATCAGTTCGGCCGATG GGGCATCTACGTCTACTGCACCTTCGCCGGGGTTCTCTCGTTCGGAGCCA TGGCGGCCTACCTGATCATCGTCGGAGACACAATCCCCACGGTCGTCAGG GCCTCGGGGGAGCACGACGCCGGCCTTCACCGAGCGATCGTCGGTGATCC TGCTGTTCGGCATCTTCTGCGTGCTGCCGCTGTCGCTACTCAAGGACCTC AGCAAGCTGTCGTACACCTCTTTCGCGAGCGTGATGGCGGACTTGCTTCT GACGTTCATCGTCATCTTCGCCGGGGCGAAGGAAGCACGGTGCGTACTGA ATGCTGTACGGCACTAGTGTAGCTCTACTGCATGAACAAGCTTATGCCTG TGTCGTTTTTATTTTTATTTTTTTATTTGATGTTAAAATTAATGTTAAAT GACCGTTAGCAGTTTTTGCACGTTGCTTAAGAAAAAATTGCGCGCTTTTA CTTTTGGCAGATGGTATGGTGCCAAGCGGGGTGGTATGGTTCAAGTGCAC ATGATGAATTAAAAAAAATCTCGATCGATAGGGGAGGGGAGGGTTCTTGC TTTCTGCGAACCACCCCCCGGACGGAATATCGCAAGCGTACATAGCCCCA CTTACTGTATTTTATGTGTATTTACGAGTGCACGTGTTGTGCTTTGTTTT TTTCTAGCGTTGATAGGACTTGATTGTTTTTCCTCAACATTCCAGCTTGA GGACGACACTTAATAAACTGAAGGTAAAGCGACCTCCGAAACACATCTCA TACCCCAAGGCTCGAGCTTAAGTTTAAGGAATAGAGGTAAATGCTCGTCT CGCCTGCGAGATTGCTTAGAATGGTTCTCGAACGGCTTTTCGACCCGCCA CATGGGCTAATTCGCGTTGTTCTCATGTTCACCCTCTTTCGGCGCCTTCC GTACCCCCGTCCATCAAATGCCGCCCGCATTCAGCGAAAACCTTGACCTC GACGGATTGCCAAAGCTCACGTTTGTAAGGCCCACGGTATTCGCCGGCTT CGGCGCGATTTCTTTCGCCTTCGTGTGCCAGAGCTCCTCTTTTCTGGTTT ATCGAAGCATGGCTAAGGGGGGATTGAACAGGTGGGCTGCCGTAACGAAG TGGTCCGGGACAATCGCCCTCCTTATGGGGCTGACGCTCGCACTCGGCGG CTACCTAAACTTTGGCCGCGAGACGCAAGGTAACATCCTCAACAACTTCT CTGAGGACAACGCGGCTGCTAGCGTGGCGCGGGCATTTCTGGCGATAACC ATGGTGAGCGAGCGGTCTACGCCTATCTTTTCCTTGTGCGGCATCGACGC AACACGGCGAATATATCCTCATGTATTTTGGCATTATTTGGAGAATATCA ACGCATACTGTTGTGGCATAAATCATAAATAGCTCCTCTGCACCTTCGGT CCTCTCGTTCCCGCCCCGCTCAAAACTGCATGCATCTGCTGTCTGATGCT CTCCCGCGGGCCATGCCTCGTCGGCACGGCAGGTGTTTACTTACCCGATG GAGATGTATGTTACAAGACATGTCATCGACTTCGCGGTTTTCCAGACCCT GTTGGGCATGGGTCCACCGACTGCCGCTCGTCACTATGGCATAACGATGG TGCTTTGGGTGCTCACCATTATTCTGGCCACGTCGACGGATGACCTCGGC GACATCTTGAGATTTTCGGCGCCTTCGGCGCGAGCGTGA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig797:371830..373568-

>mRNA_F-serratus_M_contig797.19273.1 ID=mRNA_F-serratus_M_contig797.19273.1|Name=mRNA_F-serratus_M_contig797.19273.1|organism=Fucus serratus male|type=CDS|length=1164bp|location=Sequence derived from alignment at F-serratus_M_contig797:371830..373568- (Fucus serratus male)
ATGGCGGACTTGCTTCTGACGTTCATCGTCATCTTCGCCGGGGCGAAGGA
AGCACGATGGCGGACTTGCTTCTGACGTTCATCGTCATCTTCGCCGGGGC
GAAGGAAGCACGCGAAAACCTTGACCTCGACGGATTGCCAAAGCTCACGT
TTGTAAGGCCCACGGTATTCGCCGGCTTCGGCGCGATTTCTTTCGCCTTC
GTGTGCCAGAGCTCCTCTTTTCTGGTTTATCGAAGCATGGCTAAGGGGGG
ATTGAACAGGTGGGCTGCCGTAACGAAGTGGTCCGGGACAATCGCCCTCC
TTATGGGGCTGACGCTCGCACTCGGCGGCTACCTAAACTTTGGCCGCGAG
ACGCAAGGTAACATCCTCAACAACTTCTCTGAGGACAACGCGGCTGCTAG
CGTGGCGCGGGCATTTCTGGCGATAACCATGCGAAAACCTTGACCTCGAC
GGATTGCCAAAGCTCACGTTTGTAAGGCCCACGGTATTCGCCGGCTTCGG
CGCGATTTCTTTCGCCTTCGTGTGCCAGAGCTCCTCTTTTCTGGTTTATC
GAAGCATGGCTAAGGGGGGATTGAACAGGTGGGCTGCCGTAACGAAGTGG
TCCGGGACAATCGCCCTCCTTATGGGGCTGACGCTCGCACTCGGCGGCTA
CCTAAACTTTGGCCGCGAGACGCAAGGTAACATCCTCAACAACTTCTCTG
AGGACAACGCGGCTGCTAGCGTGGCGCGGGCATTTCTGGCGATAACCATG
GTGTTTACTTACCCGATGGAGATGTATGTTACAAGACATGTCATCGACTT
CGCGGTTTTCCAGACCCTGTTGGGCATGGGTCCACCGACTGCCGCTCGTC
ACTATGGCATAACGATGGTGCTTTGGGTGCTCACCATTATTCTGGCCACG
TCGACGGATGACCTCGGCGACATCTTGAGATTTTCGGCGCCTTCGGCGCG
AGCGTGAGTGTTTACTTACCCGATGGAGATGTATGTTACAAGACATGTCA
TCGACTTCGCGGTTTTCCAGACCCTGTTGGGCATGGGTCCACCGACTGCC
GCTCGTCACTATGGCATAACGATGGTGCTTTGGGTGCTCACCATTATTCT
GGCCACGTCGACGGATGACCTCGGCGACATCTTGAGATTTTCGGCGCCTT
CGGCGCGAGCGTGA
back to top