mRNA_F-serratus_M_contig797.19273.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig797.19273.1 vs. uniprot
Match: D8LFS4_ECTSI (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFS4_ECTSI) HSP 1 Score: 300 bits (767), Expect = 4.030e-96 Identity = 156/236 (66.10%), Postives = 184/236 (77.97%), Query Frame = 2
Query: 158 GSTTPAFTERSSVILLFGIFCVLPLSLLKDLSKLSYTSFASVMADLLLTFIVIFAGAKEARENLDLDGLPKLTFVRPTVFAGFGAISFAFVCQSSSFLVYRSMAKGGLNRWAAVTKWSGTIALLMGLTLALGGYLNFGRETQGNILNNFSEDNAAASVARAFLAITMVFTYPMEMYVTRHVIDFAVFQTLLGMGPPTAARHYGITMVLWVLTIILATSTDDLGDILR-FSAPSARA 862
G+T F +R +VI +FGIF VLPLSLLKDLSKL+YTS SV+AD+ LT IV FAGA EA N D+D + F+RPTVFAGFGAISFAFV QS+SFLVYRSM+KGG++RWA VT+WS +IAL +GLTLAL GYLNF ET NILNN + A++ARAFLA+TMVFTYPMEMYV RH +D AVFQT LG GP T ARH+GI++ LWVL+I+LA ST +LG IL F A SA A
Sbjct: 155 GTTNGPFADRHAVIFMFGIFVVLPLSLLKDLSKLAYTSGISVLADVFLTLIVFFAGAGEASTNDDIDSSERFVFIRPTVFAGFGAISFAFVSQSASFLVYRSMSKGGVDRWACVTRWSVSIALGLGLTLALSGYLNFVNETDANILNNLGTRHGPANIARAFLALTMVFTYPMEMYVARHALDVAVFQTWLGKGPTTQARHFGISIALWVLSIVLAASTKNLGSILEIFGAFSANA 390
BLAST of mRNA_F-serratus_M_contig797.19273.1 vs. uniprot
Match: D8LFS5_ECTSI (Aa_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFS5_ECTSI) HSP 1 Score: 277 bits (709), Expect = 2.070e-87 Identity = 142/236 (60.17%), Postives = 182/236 (77.12%), Query Frame = 2
Query: 158 GSTTPAFTERSSVILLFGIFCVLPLSLLKDLSKLSYTSFASVMADLLLTFIVIFAGAKEARENLDLDGLPKLTFVRPTVFAGFGAISFAFVCQSSSFLVYRSMAKGGLNRWAAVTKWSGTIALLMGLTLALGGYLNFGRETQGNILNNFSEDNAAASVARAFLAITMVFTYPMEMYVTRHVIDFAVFQTLLGMGPPTAARHYGITMVLWVLTIILATSTDDLGDILR-FSAPSARA 862
G T A +R+SVI + G+FC+LPLSLLKDLSKL+YTS SV+AD+LLT IV+ + ARE D+D TF+RPT+FAGFGAISF+FVCQ SSFLVYRSM++ G++RWA VT+W+ +IAL+M LTL + GYL+F T+GNILNNF+ ++ A+VARAFLA+TMV TYP+EMYV RHV+D ++FQT LG GP T RHY IT+++WVLT+ LA ST +LG +L F A A A
Sbjct: 154 GIDTGALADRASVIGIVGVFCMLPLSLLKDLSKLAYTSCLSVLADVLLTVIVLVGASGAARELPDVDRSDVNTFIRPTIFAGFGAISFSFVCQHSSFLVYRSMSERGVDRWATVTRWAVSIALVMSLTLGVAGYLSFADGTEGNILNNFTHEHRPATVARAFLALTMVLTYPLEMYVARHVLDASLFQTCLGKGPITTVRHYWITVIIWVLTLTLALSTANLGSVLEIFGAFGASA 389
BLAST of mRNA_F-serratus_M_contig797.19273.1 vs. uniprot
Match: A0A836CLI3_9STRA (Transmembrane amino acid transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLI3_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.810e-48 Identity = 100/229 (43.67%), Postives = 134/229 (58.52%), Query Frame = 2
Query: 158 GSTTPAFTERSSVILLFGIFCVLPLSLLKDLSKLSYTSFASVMADLLLTFIVIFAGAKEARENLDLDGLPKLTFVRPTVFAGFGAISFAFVCQSSSFLVYRSMAKGGLN--RWAAVTKWSGTIALLMGLTLALGGYLNFGRETQGNILNNFSEDNAAASVARAFLAITMVFTYPMEMYVTRHVIDFAVFQTLLGMGPPTAARHYGITMVLWVLTIILATSTDDLGDILR 838
G + A T+R VI L + VLP+S +DL +FA E R +D TF R T+FAG GAISFAFVCQSS+F+VYRS+ +G + W ++T S +IA M + +A GYL+FG +T+G+ILNNFS AAA+ ARAFLA+ M+ TYPMEM V RHV+D +V + LL RH IT+++W T + A +TDDLG +L
Sbjct: 189 GVASGALTDRRVVIALLSLLVVLPVSSFRDLHXXXXXXXXXXXXXXXXXXXXVFAAPAEGRTYDTIDRTDIFTFARGTLFAGLGAISFAFVCQSSTFIVYRSLGEGARSVASWTSITHMSLSIAWAMTMAMATLGYLSFGDQTRGDILNNFSARGAAAAAARAFLAVAMLLTYPMEMVVARHVLDASVCRALLRWEEARLGRHMVITILIWAATTVTALATDDLGAVLE 417
BLAST of mRNA_F-serratus_M_contig797.19273.1 vs. uniprot
Match: A0A2R5GEI9_9STRA (Amino acid transporter, putative n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GEI9_9STRA) HSP 1 Score: 161 bits (407), Expect = 3.180e-42 Identity = 91/229 (39.74%), Postives = 141/229 (61.57%), Query Frame = 2
Query: 179 TERSSVILLFGIFCVLPLSLLKDLSKLSYTSFASVMADLLLTFIVIFAGAKEARENLDLDG---LPKLTFVRPTVFAGFGAISFAFVCQSSSFLVYRSMAKGGLNRWAAVTKWSGTIALLMGLTLALGGYLNFGRETQGNILNNFSEDNAAASVARAFLAITMVFTYPMEMYVTRHVIDFAVFQ----TLLGMGPPTAARHYGITMVLWVLTIILATSTDDLGDILRFS 844
++R V+ LF + +LPLSLL+D++ LS++S S+ AD ++ +VI A E + D P+ TF ++FAGFGAISFA+VCQ SSF+V+ ++ W V + + A++M + L+L GYL F +T NILNNF ++ ++VAR LA+TMVFT+PME +V RH + FA++ TL G ++A H+G+T+ LW + I+ + DLG I+ +
Sbjct: 200 SDRRLVVFLFALVIILPLSLLRDMAALSWSSSLSITADGIIVLLVIARAAYGVSEWPEADRGPIEPEFTFANSSIFAGFGAISFAYVCQHSSFIVFNTLKVPTTREWDRVNTGAVSTAMIMSVLLSLAGYLAFFNQTLPNILNNFPCNDNVSNVARFLLALTMVFTFPMENFVARHSL-FAIYHGFSPTLKGSRRMSSAWHFGLTLGLWGVATIIGVAVTDLGIIIELT 427
BLAST of mRNA_F-serratus_M_contig797.19273.1 vs. uniprot
Match: A0A7R9ZUM1_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia arenysensis TaxID=697910 RepID=A0A7R9ZUM1_9STRA) HSP 1 Score: 148 bits (374), Expect = 5.610e-37 Identity = 94/249 (37.75%), Postives = 141/249 (56.63%), Query Frame = 2
Query: 176 FTERSSVILLFGIFCVLPLSLLKDLSKLSYTSFASVMADLLLT-FIVIFAGAKEARENLD-LDGLPKLTFVRPTVFAGFGAISFAFVCQSSSFLVYRSMAKGGLNRWAAVTKWSGTIALLMGLTLALGGYLNFGRETQGNILNNFSEDNAAASVARAFLAITMVFTYPMEMYVTRHVI---------DFAVFQTLLGMGPPTA---------------ARHYGITMVLWVLTIILATSTDDLGDILRFS 844
F ER V+LL + V+PLS+ +D S LS+TS SV ADLLL F+ ++A E+ N L + K + + F GFG ++ A CQ S+F+V S+ RW+ VT S +++++ L L + GYL F ET G++LNNF D A+A+ ARA LAITM FTYPME +V RHV+ D +F+T++ P T +R + +T+++++LT++ A DDLG +L +
Sbjct: 177 FVERELVMLLTSLTVVVPLSMQRDFSSLSFTSTISVAADLLLVVFVAVYAPIGESIANEGGLGNIIKNSIIDKGFFIGFGVLTVAMCCQHSAFIVASSLDNPTPKRWSIVTAVSLSVSVVCCLVLGVAGYLGFLDETSGDVLNNFEVDTASANFARALLAITMFFTYPMEAFVARHVLVQLLWKGDLDGYIFETIVD--PDTGEERSTQRKAKRCRCLSRRHQVTLLIYLLTLMPALIVDDLGPVLSIT 423
BLAST of mRNA_F-serratus_M_contig797.19273.1 vs. uniprot
Match: A0A1Y1XCT7_9FUNG (Aa_trans domain-containing protein n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1XCT7_9FUNG) HSP 1 Score: 144 bits (362), Expect = 1.170e-36 Identity = 87/235 (37.02%), Postives = 138/235 (58.72%), Query Frame = 2
Query: 179 TERSSVILLFGIFCVLPLSLLKDLSKLSYTSFASVMADLLLTFIVIFAGAKEARENLDLDGLPKLTFVRPTVFAGFGAISFAFVCQSSSFLVYRSMAKGGLNRWAAVTKWSGTIALLMGLTLALGGYLNFGRETQGNILNNFSEDNAAASVARAFLAITMVFTYPMEMYVTRHVI-DFAVFQTLLGMGPPTAAR------------HYGITMVLWVLTIILATSTDDLGDILRFS 844
T R+++I L +LPLSL +D+SKLS TSF S++ +++TF VI+ G K +E L D +LTF+ +F G ISFAFVC +S L+ S+ K ++R+A VT S + ++ + +ALGGYL F +T+GNILNNF +D+ + +R AI M T P+E +V R VI + +++G G ++R H+ +T+ L + ++ +A + DDLG +L +
Sbjct: 101 TSRNAIICLTTFLVILPLSLNRDISKLSKTSFLSLIGIMIITFAVIWEGLKVPKE-LKGDPNQRLTFINKDIFQCIGVISFAFVCHHNSLLILGSLKKPSMDRFATVTHLSTGWSFVVSVAIALGGYLVFTDKTKGNILNNFPQDSLLINFSRLLFAINMFLTSPLECFVCREVILNLLNPNSVIGGGENLSSRQTKENQLFGGIEHFIVTLALILCSLYIALTIDDLGFVLEIT 334
BLAST of mRNA_F-serratus_M_contig797.19273.1 vs. uniprot
Match: A0A1Y1V7P7_9FUNG (Aa_trans domain-containing protein n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1V7P7_9FUNG) HSP 1 Score: 142 bits (358), Expect = 3.280e-35 Identity = 85/235 (36.17%), Postives = 136/235 (57.87%), Query Frame = 2
Query: 179 TERSSVILLFGIFCVLPLSLLKDLSKLSYTSFASVMADLLLTFIVIFAGAKEARENLDLDGLPKLTFVRPTVFAGFGAISFAFVCQSSSFLVYRSMAKGGLNRWAAVTKWSGTIALLMGLTLALGGYLNFGRETQGNILNNFSEDNAAASVARAFLAITMVFTYPMEMYVTRHVI-DFAVFQTLLGMGPPTAAR------------HYGITMVLWVLTIILATSTDDLGDILRFS 844
T R+ +I L +LPLSL +D+SKLS TSF S++ +++T VI+ G K +E L D ++TF+ +F G ISFAFVC +S L+ S+ K +NR+A VT S + L+ + +ALGGYL F +T+GNILNNF +D+ +++R A M T P+E +V R VI + +++G G ++ H+ +T++L + ++ +A + DDLG +L +
Sbjct: 230 TSRNFIICLTTFLIILPLSLNRDISKLSKTSFLSLLGIMIITISVIYEGIKVPKE-LKGDPNQRITFIHKDIFQCIGVISFAFVCHHNSLLILGSLKKPSMNRFATVTHLSTGWSFLVSIAIALGGYLVFTDKTKGNILNNFPQDSHLINISRILFAFNMFLTSPLECFVCREVILNLLNPNSVIGGGENLNSKETKENKLFGDIEHFIVTLILVLCSLYIALTIDDLGFVLEIT 463
BLAST of mRNA_F-serratus_M_contig797.19273.1 vs. uniprot
Match: A0A7S4QR31_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QR31_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.110e-34 Identity = 85/233 (36.48%), Postives = 128/233 (54.94%), Query Frame = 2
Query: 194 VILLFGIFCVLPLSLLKDLSKLSYTSFASVMADLLLTFIVIFAGA--KEARENLDLDGLPKLTFVRPTVFAGFGAISFAFVCQSSSFLVYRSMAKGGLNRWAAVTKWSGTIALLMGLTLALGGYLNFGRETQGNILNNFSEDNAAASVARAFLAITMVFTYPMEMYVTRHVIDFAVFQTLL----------GMGPPTAA----RHYGITMVLWVLTIILATSTDDLGDILRFS 844
V+++ F +LPLS+ +D++ LS TS SV D++L F V+ K E + + K + P +F G G +S A CQ SSFL++ S+ RWA V+ S + + + L L + G+L FG ETQG++LNNF E + A+VAR LAITM+FTYPME++V RHV+ + + G G R +T+ L++LT++ A DDLG +L +
Sbjct: 51 VLIVISAFLILPLSMQRDIASLSVTSLLSVTLDIVLVFFVVLYSPVIKNVSEQGGIAQIIKNDAISPNIFIGLGVLSDAMCCQHSSFLLFESLENHKRIRWATVSAISISTSAFLFLILGVSGFLGFGDETQGDVLNNFPEGSMEANVARGLLAITMIFTYPMELFVGRHVLVDLFHNSQIECPISELQDRGEGSFLQRIMLNRRQKMTLGLYMLTLVPALFFDDLGPVLSIT 283
BLAST of mRNA_F-serratus_M_contig797.19273.1 vs. uniprot
Match: U9U1Q1_RHIID (Aa_trans domain-containing protein n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=U9U1Q1_RHIID) HSP 1 Score: 137 bits (346), Expect = 2.490e-34 Identity = 91/224 (40.62%), Postives = 125/224 (55.80%), Query Frame = 2
Query: 176 FTERSSVILLFGIFCVLPLSLLKDLSKLSYTS-FASVMADLLLTFIVIFAGAKEARENLDLDGLPKLTFVRPTVFAGFGAISFAFVCQSSSFLVYRSMAKGGLNRWAAVTKWSGTIALLMGLTLALGGYLNFGRETQGNILNNFSEDNAAASVARAFLAITMVFTYPMEMYVTRHVIDFAVFQTLLGMGPPTAARHYGITMVLWVLTIILATSTDDLGDILRFS 844
FT+R VI+ IF PLSL +D+SKLS S A V +++T +VI A + + L TFV+P +F G ISFAFVC +S L++ S+ K LNR+AAVT S I++L L +AL GYL F +T+GNILNNF +DN ++AR M T P+E +V R I+ F P + RH T VL V +I++ T DLG +L +
Sbjct: 118 FTDRYFVIMFCTIFISYPLSLYRDISKLSKASGLALVSMTVIVTSVVI--EAPQVDQKLRGSSEETWTFVQPQIFQSIGIISFAFVCHHNSLLIFDSLRKPTLNRFAAVTHLSTGISMLACLLVALVGYLVFTDKTEGNILNNFPKDNVIINIARFCFGFNMFTTLPLEAFVCRESIEIYYFSN----APFSMKRHVISTTVLVVCAMIVSLLTSDLGIVLELT 335
BLAST of mRNA_F-serratus_M_contig797.19273.1 vs. uniprot
Match: A0A7S1URN2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1URN2_9STRA) HSP 1 Score: 139 bits (350), Expect = 3.890e-34 Identity = 89/239 (37.24%), Postives = 135/239 (56.49%), Query Frame = 2
Query: 173 AFTERSSVILLFGIFCVLPLSLLKDLSKLSYTSFASVMADLLLT-FIVIFAGAKEARENLDLDGLPKLT---FVRPTVFAGFGAISFAFVCQSSSFLVYRSMAKGGLNRWAAVTKWSGTIALLMGLTLALGGYLNFGRETQGNILNNFSEDNAAASVARAFLAITMVFTYPMEMYVTRHVIDFAVFQTLLG--MGPPTAA---------RHYGITMVLWVLTIILATSTDDLGDILRFS 844
+F ER V++ + +LPLSL +D++ L+ TS SV AD++L F+ F+ K D G ++ ++ PT+F G G +S A CQ S+F+V S+ K + RW +VT S + A ++ L L + GYL F ET+G++LNNF + ++ ARA LAITM FTYPME +V RHV ++ + + P T A R Y +T+ ++ LT+I A DDLG +L +
Sbjct: 114 SFVEREMVMIATSLIVILPLSLQRDMASLAVTSLLSVTADVILVGFVAAFSPIKST--VADAGGFGEVLRDDWLNPTLFVGLGIVSTAMACQHSAFIVSGSLQKITVKRWGSVTFRSISCATILCLILGVCGYLGFLDETEGDVLNNFPAHSRESNGARALLAITMFFTYPMEAFVARHVFVKLMYNGNMDGEVVPETGAFRPEFLCFSRRYFLTLGIYALTLIPALLLDDLGPVLSIT 350 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig797.19273.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig797.19273.1 >prot_F-serratus_M_contig797.19273.1 ID=prot_F-serratus_M_contig797.19273.1|Name=mRNA_F-serratus_M_contig797.19273.1|organism=Fucus serratus male|type=polypeptide|length=194bp MADLLLTFIVIFAGAKEARENLDLDGLPKLTFVRPTVFAGFGAISFAFVCback to top mRNA from alignment at F-serratus_M_contig797:371830..373568- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig797.19273.1 ID=mRNA_F-serratus_M_contig797.19273.1|Name=mRNA_F-serratus_M_contig797.19273.1|organism=Fucus serratus male|type=mRNA|length=1739bp|location=Sequence derived from alignment at F-serratus_M_contig797:371830..373568- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig797:371830..373568- >mRNA_F-serratus_M_contig797.19273.1 ID=mRNA_F-serratus_M_contig797.19273.1|Name=mRNA_F-serratus_M_contig797.19273.1|organism=Fucus serratus male|type=CDS|length=1164bp|location=Sequence derived from alignment at F-serratus_M_contig797:371830..373568- (Fucus serratus male)back to top |