mRNA_F-serratus_M_contig7888.19142.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig7888.19142.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 520 bits (1338), Expect = 1.050e-172 Identity = 269/455 (59.12%), Postives = 323/455 (70.99%), Query Frame = 1
Query: 88 EDGGCATMTDIYKTRVESDGWTPKGPVYILDGNDDIMYSPTSVTGKWLLASDLHILRGSIFYCRGTSIGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNKSPTDDYEDGRSFINCVSEYESDETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAQAVGIFLHRSSDSCEVYDNDVHDMQDAGIAIMESFDADIHDNSFTNVKYGMRISLGGGNNNVYDNVFDECSKYGLYTYQGSDEP-DASADGRPSDNNFYGNTISNTATGVKITEADDTSITGNTFTGTSVFEFKDAQNTVWSSNTFEDADSDLCYKNFES--------STFASTDDTLPSL 1425
E GC T+TD+Y R+ESDG + KGP++ LD + + + +P ++ KWLL ++LHI G++FYCRG+SIGGDCDELRIQSTG TDF+EVR HGGS+YFE+T+VTSWDTPNK+P Y GRSF+NCVSE + E C GQ +N+ GECRMDII+SE+GYLG+FDSESYGLTWKVRGFC D SNP+VFDTTNVYG++ SDIHH YYG YSYGHQGGVW NN+MHDNHQYGFDPHDDSDYLT GG A GIFLHRSSD V+DN VHDMQDAG+A++ES +ADI++N F++VK+G+R+SLG N+V++N+F++ S GLYTYQGSDEP D +DGRPSDN F N I N GVKI E DDT IT N FTGTS EF DAQNT W NT +C KN S STF LP+L
Sbjct: 83 EGEGCFTITDLYNFRLESDG-SAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVYD------------GGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQG---VCIKNIHSDDGIDIELSTFDRRTAGLPTL 521
BLAST of mRNA_F-serratus_M_contig7888.19142.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 527 bits (1357), Expect = 1.360e-170 Identity = 266/461 (57.70%), Postives = 322/461 (69.85%), Query Frame = 1
Query: 40 SMRYSSGSGLNGRIYLEDGGCATMTDIYKTR-VESDGWTPKGPVYILDGNDDIMYSPTSVTGKWLLASDLHILRGSIFYCRGTSIGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNKSPTDDYEDGRSFINCVSEYESDETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAQAVGIFLHRSSDSCEVYDNDVHDMQDAGIAIMESFDADIHDNSFTNVKYGMRISLGGGNNNVYDNVFDECSKYGLYTYQGSDEPDASADGRPSDNNFYGNTISNTATGVKITEADDTSITGNTFTGTSVFEFKDAQNTVWSSNTFEDADSDLCYKNFESSTFASTDDTLP 1419
S RY++ SG+ GR+Y E GC TMTD+Y R E+DG + KGPVY+LD + + P+ +T WLLA++L+I G +FYC+GTS GGDC++LRIQSTGS DF+EVRGHGGSLYFE+T+VTSWDTPNK P + YE+GRSF+NCVSE + + C+G KN+ GECRMDII+SE+ YLG+FDSESYG+TWKVRGFC D SNPEVF+ TNVYGD+ SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLTIA GGA A GIFLHRSSD V+DN + +MQDAGIA++ESFDA I+ N KYG+R+SLG GNN VY N F + S+YGLYTY+GSDEPD S DGRPS N N + + GVKI E DD NTF FEF ++ NT+WS N D C + + AS D++P
Sbjct: 429 SFRYAASSGVAGRLYAEGEGCFTMTDLYNFRGTENDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDG----CIEEDDEFDAASGSDSIP 883
BLAST of mRNA_F-serratus_M_contig7888.19142.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 494 bits (1271), Expect = 1.600e-163 Identity = 258/457 (56.46%), Postives = 313/457 (68.49%), Query Frame = 1
Query: 88 EDGGCATMTDIYKTR-VESDGWTPKGPVYILDGNDDIMYSPTSVTGKWLLASDLHILRGSIFYCRGTSIGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNKSPTDDYEDGRSFINCVSEYESDETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVR---------GFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAQAVGIFLHRSSDSCEVYDNDVHDMQDAGIAIMESFDADIHDNSFTNVKYGMRISLGGGNNNVYDNVFDECSKYGLYTYQGSDEPDASADGRPSDNNFYGNTISNTATGVKITEADDTSITGNTFTGTSVFEFKDAQNTVWSSNTFEDADSDLCYKNFES--------STFAST 1404
E GC T+TD+Y R E+DG + KGP+Y+LDG+ + +PTSVT KWLL ++L++ G+IFYC G+ GGDCDELRIQSTG D+ EVRGHGGS+YF +T+VTSWDTPNK P + YE GRSF+NCVSE + ETCDG KND GECRMDII+SEMGY+G+FDSESYGLTWKVR GFC D SNP+VF+TTNVYGDIKNSDIHHMYYG YSYGHQGGVWTNN+MHDNHQY +A GG AVGIFLHRSSD+ EVY N + +M DAGIA++ESF+ADIHDN V++G+R+SLG G N+VYDN F++CS +GLYTY GSDEPD S +GRP+ N F N ++N+A GVK +D+ +T N FTGT EF DAQ T WS N+ S +C N S STF+S+
Sbjct: 18 ESEGCFTLTDLYNFRGTENDG-SSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVS-NGRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLP---SGVCIDNITSDDGNSVPPSTFSSS 457
BLAST of mRNA_F-serratus_M_contig7888.19142.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 466 bits (1200), Expect = 3.690e-153 Identity = 236/448 (52.68%), Postives = 299/448 (66.74%), Query Frame = 1
Query: 88 EDGGCATMTDIYKTRVESDGWTPKGPVYILDGNDDIMYSPTSVTGKWLLASDLHILRGSIFYCRGTSIGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNKSPTDDYEDGRSFINCVSEY-ESDETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAQAVGIFLHRSSDSCEVYDNDVHDMQDAGIAIMESFDADIHDNSFTNVKYGMRISLGGGNNNVYDNVFDECSKYGLYTYQGSDEPDASADGRPSDNNFYGNTISNTATGVKITEADDTSITGNTFTGTSVFEFKDAQNTVWSSNTFEDADSDLCYKNFESSTFASTDDTLPSLC 1428
+ GGC T++D+Y + + KGPV++LD ND + + T+ TGKWLL +DL + G+ YCRG +GG+C ELRI+ST +DF E+RGHGG+LYFE+T+VTSWD + P + Y+DGRSFI CVSE ++TC N+ GECRMDIIDSEMGYLG+ SE+YG+TWKVRGFC+D SNP+VFD NVYGD+K SDIHHMYYGMYS+GHQGGVWTNN MHDNHQYGFDPHDDSDYL IA GGA A GIFLHRS D EVY N + +M DAGIA++E+ DIHDN ++G+R+ LG NN V+DNVF G++TY GSDEP GRP DN FY NTI T TGVKI E+D+ SIT N F+GT+ EF +A + VWS N+ ++ C ++ ++++ + LP C
Sbjct: 7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIP---TNTCLEDIDNNSTFTGSSGLPLEC 447
BLAST of mRNA_F-serratus_M_contig7888.19142.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 422 bits (1085), Expect = 2.400e-137 Identity = 209/348 (60.06%), Postives = 250/348 (71.84%), Query Frame = 1
Query: 109 MTDIYKTR-VESDGWTPKGPVYILDGNDDIMYSPTSVTGKWLLASDLHILRGSIFYCRGTSIGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNKSPTDDYEDGRSFINCVSEYESDETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWK--------VRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAQAVGIFLHRSSDSCEVYDNDVHDMQDAGIAIMESFDADIHDNSFTNVKYGMRISLGGGNNNVYDNVFDECSK 1125
MTD+Y R E DG + KGPVY+LD + + P+ +T WLLA++L+I G +FYC+GTS GGDC++LRIQSTGS DF+EVRGHGGSLYFE+T+VTSWDTPNK P + YE GRSF+NCVSE + + C+G KN+ GECRMDII+SE+ YLG+FDSESYG+TWK VRGFC D SNPEVFD TNVYGD+ SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLT GGA AVGIFLHRSSD V+DN + +MQDAGIA++E+FDA I+ N+ KYG+R+SLG GNN VY N F + S+
Sbjct: 1 MTDLYNFRGTEKDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENEVRD------------GGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335
BLAST of mRNA_F-serratus_M_contig7888.19142.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 427 bits (1098), Expect = 9.190e-133 Identity = 230/459 (50.11%), Postives = 294/459 (64.05%), Query Frame = 1
Query: 73 GRIYLEDGGCATMTDIYKTRVESDGWTPKGPVYILDGNDDIMYSPTSVTGKWLLASDLHILRGSIFYCRGTSIGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNKSPTDDYEDGRSFINCVSEYESD--ETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAQAVGIFLHRSSDSCEVYDNDVHDMQDAGIAIMESFDADIHDNSFTNVKYGMRISLGGGNNNVYDNVFDECSKYGLYTYQGSDEPDASAD--GRPSDNNFYGNTISNTATGVKITEADDTSITGNTF---TGTSVFEFKDAQNTVWSSNTFEDADSDLCYKNFESSTFASTDDTLPSLC 1428
G+ Y+ GGCAT+TDIY + G GP+++LD ND+++ S TG WLL D+H+ GS+ G GGD LRIQSTGS D+ E+RGHGGSL F +T VTSWDT K +Y+ RSFI CVSE +D +TCDG N GECRMDII SEMG +G+ +ESYG++WKVRG+C++ NPEVF+ T V GDI +SDI+ MYYG YS+GH GG+WT NKMHDN QYGFDPHDDSD L IA GG AVGIFLHRSSD CEV+ N V+DM+DAG+AIMES A IHDN+FTNVKYG+R+S+G N V +N F EC +YG+YTYQG+D+P+AS D G DN F+ NT+ GVKI +A+ T N F + + F+D ++ VW++N D D+C K ++ + + D+LP LC
Sbjct: 398 GKNYIRGGGCATLTDIYTAQ---GGHNDDGPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTVEG---GVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPD---DICLKGDKNIDYMKSYDSLPDLC 845
BLAST of mRNA_F-serratus_M_contig7888.19142.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 403 bits (1036), Expect = 7.230e-130 Identity = 234/419 (55.85%), Postives = 271/419 (64.68%), Query Frame = 1
Query: 172 ILDGNDDIMYSPTSVTGKWLLASDLHILRGSIFYCRGTSIGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNKSPTDDYEDGRSFINCVSEYESDETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAQAVGIFLHRSSDSCEVYDNDVHDMQDAGIAIMESFDADIHDNSFTNVKYGMRISLGGGNNNVYDNVFDECSKYGLYTYQGSDEPDASADGRPSDNNFYGNTISNTATGVKITEADDTSITGNTFTGTSVFEFKDAQNTVWSSNTFEDADSDLCYKNFES--------STFAST 1404
+LD + + + SPTSVT KWLL S+L++ G+IFYC G+ GGDCDELRIQSTG D+ EVRGHGGS+YF +T+VTSWDTPNK P + YE GRSF+NCVSE + ETCDG+ KND GECRMDII+SEMGY+G+FD+ESYGLTWKVRGFC D SNP+VF+TTNVYGDIKNS+IHHMYYGMYSYGHQGGVWTNN+MHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXX GG +AVGIFLHRSSD+ EVY G D PD S +GRP+ N F N I+NTA GVKI +D+ I+ N FTGT EF DAQ T WS N+ S +C N S STF+S+
Sbjct: 1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVS-NGRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLP---SGVCIDNVTSDDGNSVPPSTFSSS 360
BLAST of mRNA_F-serratus_M_contig7888.19142.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 408 bits (1048), Expect = 5.680e-128 Identity = 221/431 (51.28%), Postives = 281/431 (65.20%), Query Frame = 1
Query: 82 YLEDGGCATMTDIYKTRVESDGWTPKGPVYILDGNDDIMYSPTSVTGKWLLASDLHILRGSIFYCRGTSIGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNKSPTDDYEDGRSFINCVSEYESDET--CDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKS------NPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAQAVGIFLHRSSDSCEVYDNDVHDMQDAGIAIMESFDADIHDNSFTNVKYGMRISLGGGNNNVYDNVFDECSKYGLYTYQGSDEPDA-SADGRPSDNNFYGNTISNTAT--GVKITEADDTSITGNTFTGTSVFEFKDAQNTVWSSNT 1341
Y E GGC T+T +Y+ + E DG P+Y+LD N+D++ + TG WLL +L ++ GS GT+ GD D LR+ ST S DF EVRG+GG+L+F++T VTSWDT N + DGRSFINCV++++ CDG+ ++GECRMDII S MG +GWFD+ESYGLTWKVRG C N E+F+ NVYGDI NS+I+ MYYG YSYGHQGGVW +N M DN QYGFDPHDDSD LTI+ GG AVGIFLHRSSD EV+DN V++MQDAG+A+MES+DA+I+DNSFTN +YG+R+SLG G N + +N+F ++YGLYTY GSD+PD +++GRPSDN F GNTI GV I E D N FTG S +EF+D+ +T W NT
Sbjct: 192 YFEGGGCGTLTQMYEAQ-EGDG-----PLYVLDENNDVVGG--TPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT 613
BLAST of mRNA_F-serratus_M_contig7888.19142.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI) HSP 1 Score: 384 bits (987), Expect = 1.580e-116 Identity = 222/467 (47.54%), Postives = 273/467 (58.46%), Query Frame = 1
Query: 28 GTISSMRYSSGSGLNGRIYLEDGGCATMTDIYKTRVESDGWTPKGPVYILDGNDDIMYS---PTSVTGKWLLASDLHILRGSIFYCRGTSIGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNKSPTDDYEDGRSFINCVSEYESDE--TCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAQAVGIFLHRSSDSCEVYDNDVHDMQDAGI------------------------AIMESFDADIHDNSFTNVKYGMRISLGGGNNNVYDNVFDECSKYGLYTYQGSDEPDASA-DGRPSDNNFYGNTISNTATGVKITEADDTSITGNTFTGTSVFEFKDAQNTVWSSN 1338
GTI+S+ SS S GGCAT+TD+Y T+ S GP+Y+LD +++I+ S TG WLL S L IL G Y GTS GGD D LRIQST DF E+RG GGSL F T VTSWDT +YE GRSFINCV++++ + +C G+ + GECRMDIIDS MG +GWFD+ESYGLTWKVRG C+D SN E+ D NVYGDIK S+I+ MYYGMYSYGHQGGVWT+N M DN YGFDPHDDSD LTIA G GI + ++ E+Y A+MESF A+I+DN+ N KYG+R+SLG +N+++DN FD S YGLYTY+GSD+PD S DGR DN+F NTISNT +KI E DD S T N F FEF+D+ +TVW++N
Sbjct: 396 GTIASISTSSDSSS-----FSGGGCATLTDMYNTQSGS------GPLYVLDSSNNIVSGGGGSASPTGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQST-DDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNKERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVY--------------------------GNGNHGIIASKRCNNVEIYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNN 824
BLAST of mRNA_F-serratus_M_contig7888.19142.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 364 bits (935), Expect = 7.090e-113 Identity = 213/446 (47.76%), Postives = 266/446 (59.64%), Query Frame = 1
Query: 40 SMRYSSGSGLNGRIYLED------GGCATMTDIYKTRVESDGWTPKGPVYILDGNDDIMYSPTSVTGKWLLASDLHILRGSIFYCRGTSIGGDCDELRIQSTGSTDFNEVRGHGGSLYFENTLVTSWDTPNKSPTDDYEDGRSFINCVSEY--ESDETCDGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAQAVGIFLHRSSDSCEVYDNDVHDMQDAGIAIMESFDADIHDNSFTNVKYGMRISLGGGNNNVYDNVFDECSKYGLYTYQGSDEPDASADGRPSDNNFYGNTISNTATGVKITEADDTSITGNTF-TGTS---VFEFKDAQNTVWSSNT 1341
S+RY +G R+YLE GGCAT+ I+++R K P+Y +D + + S T TG WLL +L++ G GT GGD DELR+ ST T N +R HGGSL F T V SWDT SP +D DGRS+I+ VSE + DETC+G KN GE RMDI +SE+GYLG+ DSESYGLTWKVRGFC DKSNPE+FD NVYG++ +SDIHH+ +G+Y+YGHQ G W NKMHDN YGFDPHDDSD+LTI G + GIFLHRSSD V N VHD DAG+A++ESF+AD+ +N+F N KYG+R+S+G +N +N+ SKY YTY GSDEPD + GR +N F N+ S +KI EAD T N F G + V F DA N+V NT
Sbjct: 50 SIRY---AGTTKRLYLESADGETRGGCATLGQIWESRAG------KAPLYAVDPDSGDV-SETE-TGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYIN-LRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNT 483 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7888.19142.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig7888.19142.1 >prot_F-serratus_M_contig7888.19142.1 ID=prot_F-serratus_M_contig7888.19142.1|Name=mRNA_F-serratus_M_contig7888.19142.1|organism=Fucus serratus male|type=polypeptide|length=476bp MTIADECTGTISSMRYSSGSGLNGRIYLEDGGCATMTDIYKTRVESDGWTback to top mRNA from alignment at F-serratus_M_contig7888:4658..9411- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig7888.19142.1 ID=mRNA_F-serratus_M_contig7888.19142.1|Name=mRNA_F-serratus_M_contig7888.19142.1|organism=Fucus serratus male|type=mRNA|length=4754bp|location=Sequence derived from alignment at F-serratus_M_contig7888:4658..9411- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig7888:4658..9411- >mRNA_F-serratus_M_contig7888.19142.1 ID=mRNA_F-serratus_M_contig7888.19142.1|Name=mRNA_F-serratus_M_contig7888.19142.1|organism=Fucus serratus male|type=CDS|length=2856bp|location=Sequence derived from alignment at F-serratus_M_contig7888:4658..9411- (Fucus serratus male)back to top |