prot_F-serratus_M_contig769.18932.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig769.18932.1
Unique Nameprot_F-serratus_M_contig769.18932.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length131
Homology
BLAST of mRNA_F-serratus_M_contig769.18932.1 vs. uniprot
Match: A0A6H5KZV5_9PHAE (ER membrane protein complex subunit 6 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZV5_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 1.010e-57
Identity = 98/130 (75.38%), Postives = 111/130 (85.38%), Query Frame = 0
Query:    1 MADMGMGMGADMGGQGGQGAGDDVDERQFYSAENIAHNARVLDFCRTSLCAVGGIVSGVLGLTGPIGLLAYLVLYVVVSLSLLVKMGTTDVSLYTSGKGKLATFAFGGVGNFALTYILFWTLAYTLVYIY 130
            M DMGMGMG +MG             RQFYS+ENIAHN +VL++CRTSLCAVGGIVSG+LGLTG +GL +YL+LY+VVSLSL+VKMGTTDVSLYT+GKGKLA FAFGGVGN+ALTYILFWTLAYTLVYIY
Sbjct:    1 MGDMGMGMGPEMGXXX---XXXXXXXRQFYSSENIAHNKKVLEYCRTSLCAVGGIVSGILGLTGLVGLFSYLILYLVVSLSLVVKMGTTDVSLYTAGKGKLAMFAFGGVGNYALTYILFWTLAYTLVYIY 127          
BLAST of mRNA_F-serratus_M_contig769.18932.1 vs. uniprot
Match: A0A835YLI1_9STRA (ER membrane protein complex subunit 6 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLI1_9STRA)

HSP 1 Score: 103 bits (258), Expect = 3.390e-26
Identity = 55/108 (50.93%), Postives = 76/108 (70.37%), Query Frame = 0
Query:   25 DERQFYSAENIAHNARVLDFCRTSLCAVGGIVSGVLGLTGPIGLLAYLVLYVVVSLSLLVKMGTTDVSLYTSGK--GKLATFAFGGVGNFALTYILFWTLAYTLVYIY 130
            D++ F +A+N+ HN +++  CRTSLCAV GI +G+LG TG +GL+ YL+ Y  VSL+LL KMG  D S YT+ K    +A F   G+   ++T+ILFWTLAY LVY+Y
Sbjct:   14 DDKGFLNAQNLMHNMKIITACRTSLCAVAGIATGILGCTGSMGLILYLITYATVSLALLAKMGF-DRSDYTAAKKDSGIAGFLLEGLFGLSITFILFWTLAYALVYVY 120          
BLAST of mRNA_F-serratus_M_contig769.18932.1 vs. uniprot
Match: A0A024GQF1_9STRA (Uncharacterized protein n=6 Tax=Albugo candida TaxID=65357 RepID=A0A024GQF1_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 4.140e-16
Identity = 45/100 (45.00%), Postives = 65/100 (65.00%), Query Frame = 0
Query:   28 QFYSAENIAHNARVLDFCRTSLCAVGGIVSGVLGLTGPIGLLAYLVLYVVVSLSLLV-KMGTTDVSLYTSGKGKLATFAFGGVGNFALTYILFWTLAYTL 126
            +F   EN+ +NA+V++FC TS+C V G +SG++GLTG  G    L+LY+V  L++L+ KM     + Y    G L TF F G+ +  L++ILFWTLAY L
Sbjct:  810 EFLLMENVQNNAKVIEFCHTSMCVVSGCISGIIGLTGLTGFAFMLMLYIVTDLAILLFKMKNNLKTFYN---GSLLTFLFDGIFSHGLSFILFWTLAYGL 906          
BLAST of mRNA_F-serratus_M_contig769.18932.1 vs. uniprot
Match: A0A2K1IUJ4_PHYPA (ER membrane protein complex subunit 6 n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IUJ4_PHYPA)

HSP 1 Score: 75.1 bits (183), Expect = 8.590e-15
Identity = 44/109 (40.37%), Postives = 65/109 (59.63%), Query Frame = 0
Query:   22 DDVDERQFYSAENIAHNARVLDFCRTSLCAVGGIVSGVLGLTGPIGLLAYLVLYVVVSLSLLVKMGTTDVSLYTSGKGKLATFAFGGVGNFALTYILFWTLAYTLVYIY 130
            DD DE   YS EN+  N R++ + RT L  VGG+++GVLGLTG  G L Y ++ ++ S+ +  K    DV  Y     ++    F G+G   L++ILFWT AY +V+I+
Sbjct:   24 DDADEVPAYSQENVQLNMRMIYYSRTFLSIVGGVIAGVLGLTGISGFLCYFLIMMLASVGVAAK-AKFDVHSYFDSWNRIL---FDGIGQGLLSFILFWTFAYDIVHIF 128          
BLAST of mRNA_F-serratus_M_contig769.18932.1 vs. uniprot
Match: A0A7S3ZWF8_9STRA (ER membrane protein complex subunit 6 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZWF8_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 2.580e-13
Identity = 43/106 (40.57%), Postives = 63/106 (59.43%), Query Frame = 0
Query:   25 DERQFYSAENIAHNARVLDFCRTSLCAVGGIVSGVLGLTGPIGLLAYLVLYVVVSLSLLVKMGTTDVSLYTSGKGKLATFAFGGVGNFALTYILFWTLAYTLVYIY 130
            D +  +  + +AHN   +D CR+ L   G + +GV+G TG  GLL ++  YV+ S++LL +M    V  YTS    L  F   G   +AL+++LFWTLAY LV+IY
Sbjct:   10 DAKNLFDRDAMAHNLNAVDGCRSYLTLFGAVGAGVVGATGLRGLLFFVGTYVLGSVALLTRMRCNPVD-YTSE--SLTKFVIMGAPGYALSFVLFWTLAYALVHIY 112          
BLAST of mRNA_F-serratus_M_contig769.18932.1 vs. uniprot
Match: A0A6P6SSX2_COFAR (ER membrane protein complex subunit 6 n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6SSX2_COFAR)

HSP 1 Score: 70.9 bits (172), Expect = 3.140e-13
Identity = 39/111 (35.14%), Postives = 70/111 (63.06%), Query Frame = 0
Query:   20 AGDDVDERQFYSAENIAHNARVLDFCRTSLCAVGGIVSGVLGLTGPIGLLAYLVLYVVVSLSLLVKMGTTDVSLYTSGKGKLATFAFGGVGNFALTYILFWTLAYTLVYIY 130
            A D++++   + AEN+ +NA+V+ + RT +  +GG+V+G+LGLTG +G + Y ++  + S+ L  K G +  S + S    L    FGG+    ++++LFWT AY +V+I+
Sbjct:   14 ASDNLNDLPTFHAENMQNNAKVMYYSRTFMSIIGGVVAGILGLTGLMGFVFYFLIMGITSVGLAAKAGFSIHSYFDSWNKILLDGFFGGL----MSFVLFWTFAYDIVHIF 120          
BLAST of mRNA_F-serratus_M_contig769.18932.1 vs. uniprot
Match: A0A068U343_COFCA (ER membrane protein complex subunit 6 n=2 Tax=Coffea TaxID=13442 RepID=A0A068U343_COFCA)

HSP 1 Score: 70.9 bits (172), Expect = 7.830e-13
Identity = 39/111 (35.14%), Postives = 70/111 (63.06%), Query Frame = 0
Query:   20 AGDDVDERQFYSAENIAHNARVLDFCRTSLCAVGGIVSGVLGLTGPIGLLAYLVLYVVVSLSLLVKMGTTDVSLYTSGKGKLATFAFGGVGNFALTYILFWTLAYTLVYIY 130
            A D++++   ++AEN+ +NA+V+ + RT +  +GG+V+G+LGLTG +G + Y ++  + S  L  K G +  S + S    L    FGG+    ++++LFWT AY +V+I+
Sbjct:   54 ASDNLNDLPTFNAENMQNNAKVMYYSRTFMSIIGGVVAGILGLTGLMGFVFYFLIMGITSAGLAAKAGFSIHSYFDSWNKILLDGFFGGL----MSFVLFWTFAYDIVHIF 160          
BLAST of mRNA_F-serratus_M_contig769.18932.1 vs. uniprot
Match: A0A484K5Q0_9ASTE (ER membrane protein complex subunit 6 n=3 Tax=Cuscuta sect. Cleistogrammica TaxID=1824901 RepID=A0A484K5Q0_9ASTE)

HSP 1 Score: 69.7 bits (169), Expect = 8.830e-13
Identity = 36/108 (33.33%), Postives = 68/108 (62.96%), Query Frame = 0
Query:   23 DVDERQFYSAENIAHNARVLDFCRTSLCAVGGIVSGVLGLTGPIGLLAYLVLYVVVSLSLLVKMGTTDVSLYTSGKGKLATFAFGGVGNFALTYILFWTLAYTLVYIY 130
            ++DE   ++AEN+ +N +++ + RT +  +GG+++GVLGLTG +G + Y ++  + S+ LL K   +  S + S    +     GG+    ++++LFWTLAY +V+I+
Sbjct:   17 EIDELPTFNAENMQNNVKIIYYSRTFMAIIGGVIAGVLGLTGLMGFIFYFLIMGITSVGLLAKAKFSVFSYFESWNRIMLDGFLGGL----MSFVLFWTLAYDIVHIF 120          
BLAST of mRNA_F-serratus_M_contig769.18932.1 vs. uniprot
Match: UPI00125E678C (ER membrane protein complex subunit 6 n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125E678C)

HSP 1 Score: 69.3 bits (168), Expect = 1.250e-12
Identity = 37/111 (33.33%), Postives = 69/111 (62.16%), Query Frame = 0
Query:   20 AGDDVDERQFYSAENIAHNARVLDFCRTSLCAVGGIVSGVLGLTGPIGLLAYLVLYVVVSLSLLVKMGTTDVSLYTSGKGKLATFAFGGVGNFALTYILFWTLAYTLVYIY 130
            +G+ +DE   +SAEN+ +N +V+ + RT +  +GG+++G+LGLTG +G + Y ++  + S  L+ K   +  S + +    +     GG+    L+++LFWTLAY +V+I+
Sbjct:   14 SGNGIDELPTFSAENMQNNMKVIYYSRTFMSIIGGVIAGILGLTGLMGFIFYFLIMGITSAGLIAKAKFSVFSYFDNWNRIILDGFLGGL----LSFVLFWTLAYDIVHIF 120          
BLAST of mRNA_F-serratus_M_contig769.18932.1 vs. uniprot
Match: A0A7E6FSV8_OCTVU (ER membrane protein complex subunit 6 n=3 Tax=Octopus TaxID=6643 RepID=A0A7E6FSV8_OCTVU)

HSP 1 Score: 69.7 bits (169), Expect = 1.350e-12
Identity = 38/108 (35.19%), Postives = 64/108 (59.26%), Query Frame = 0
Query:   23 DVDERQFYSAENIAHNARVLDFCRTSLCAVGGIVSGVLGLTGPIGLLAYLVLYVVVSLSLLVKMGTTDVSLYTSGKGKLATFAFGGVGNFALTYILFWTLAYTLVYIY 130
            D  +   YS   + +NA ++D+CRTS+ A+GG  +G++GLT   G + Y +  +++S+ L+VK G+     + S +    +  FGG+     TYILFWT  Y +V++Y
Sbjct:   35 DKQDAVAYSEIAVRNNAAIMDYCRTSMSALGGATAGIMGLTSLHGFIFYFISAILLSVMLMVKAGSRWNKYFVSRRVLFFSGLFGGL----FTYILFWTFLYGMVHVY 138          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig769.18932.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZV5_9PHAE1.010e-5775.38ER membrane protein complex subunit 6 n=2 Tax=Ecto... [more]
A0A835YLI1_9STRA3.390e-2650.93ER membrane protein complex subunit 6 n=1 Tax=Trib... [more]
A0A024GQF1_9STRA4.140e-1645.00Uncharacterized protein n=6 Tax=Albugo candida Tax... [more]
A0A2K1IUJ4_PHYPA8.590e-1540.37ER membrane protein complex subunit 6 n=1 Tax=Phys... [more]
A0A7S3ZWF8_9STRA2.580e-1340.57ER membrane protein complex subunit 6 n=1 Tax=Pela... [more]
A0A6P6SSX2_COFAR3.140e-1335.14ER membrane protein complex subunit 6 n=2 Tax=Coff... [more]
A0A068U343_COFCA7.830e-1335.14ER membrane protein complex subunit 6 n=2 Tax=Coff... [more]
A0A484K5Q0_9ASTE8.830e-1333.33ER membrane protein complex subunit 6 n=3 Tax=Cusc... [more]
UPI00125E678C1.250e-1233.33ER membrane protein complex subunit 6 n=2 Tax=Ipom... [more]
A0A7E6FSV8_OCTVU1.350e-1235.19ER membrane protein complex subunit 6 n=3 Tax=Octo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029008Rab5-interacting protein familyPFAMPF07019Rab5ipcoord: 41..124
e-value: 8.8E-13
score: 48.7
IPR008504ER membrane protein complex subunit 6PANTHERPTHR20994UNCHARACTERIZEDcoord: 22..130
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 85..103
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..84
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 130..130
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..129
NoneNo IPR availableTMHMMTMhelixcoord: 62..84
NoneNo IPR availableTMHMMTMhelixcoord: 105..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig769contigF-serratus_M_contig769:35019..40532 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig769.18932.1mRNA_F-serratus_M_contig769.18932.1Fucus serratus malemRNAF-serratus_M_contig769 34011..40679 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig769.18932.1 ID=prot_F-serratus_M_contig769.18932.1|Name=mRNA_F-serratus_M_contig769.18932.1|organism=Fucus serratus male|type=polypeptide|length=131bp
MADMGMGMGADMGGQGGQGAGDDVDERQFYSAENIAHNARVLDFCRTSLC
AVGGIVSGVLGLTGPIGLLAYLVLYVVVSLSLLVKMGTTDVSLYTSGKGK
LATFAFGGVGNFALTYILFWTLAYTLVYIY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029008Rab5IP_fam
IPR008504Emc6