mRNA_F-serratus_M_contig75.18777.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig75.18777.1 vs. uniprot
Match: A0A6H5JD89_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD89_9PHAE) HSP 1 Score: 130 bits (326), Expect = 2.320e-31 Identity = 61/103 (59.22%), Postives = 75/103 (72.82%), Query Frame = 2
Query: 413 SGSRFIPPSDELLERFNLVVSVYGHLLESKTKQPLLRREALDAVERLRVHIKTGCISDSPAISLYFEKGKDQLTGVTLYRCARGINDLEGFHKHMRSLIKWCV 721
+ R IP ELLERF+LV ++YG L++ KTKQPL R EAL+A++RLRVHI C SDSP +LYFE GKD T L+RC RG NDLEG+H HMR L+ WC+
Sbjct: 203 AAGRLIPRPAELLERFDLVNNLYGGLIDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDSPNEALYFEAGKDAETLCPLFRCIRGTNDLEGYHLHMRLLVAWCI 305
BLAST of mRNA_F-serratus_M_contig75.18777.1 vs. uniprot
Match: A0A6H5JET4_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JET4_9PHAE) HSP 1 Score: 129 bits (325), Expect = 1.240e-30 Identity = 61/100 (61.00%), Postives = 74/100 (74.00%), Query Frame = 2
Query: 422 RFIPPSDELLERFNLVVSVYGHLLESKTKQPLLRREALDAVERLRVHIKTGCISDSPAISLYFEKGKDQLTGVTLYRCARGINDLEGFHKHMRSLIKWCV 721
R IP ELLERF+LV ++YG L++ KTKQPL R EAL+A++RLRVHI C SDSP +LYFE GKD T L+RC RG NDLEG+H HMR L+ WC+
Sbjct: 779 RLIPRPAELLERFDLVNNLYGGLIDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDSPNEALYFEAGKDAETLCPLFRCIRGTNDLEGYHLHMRLLVAWCI 878
BLAST of mRNA_F-serratus_M_contig75.18777.1 vs. uniprot
Match: A0A6H5KEU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEU8_9PHAE) HSP 1 Score: 127 bits (320), Expect = 3.680e-30 Identity = 60/100 (60.00%), Postives = 74/100 (74.00%), Query Frame = 2
Query: 422 RFIPPSDELLERFNLVVSVYGHLLESKTKQPLLRREALDAVERLRVHIKTGCISDSPAISLYFEKGKDQLTGVTLYRCARGINDLEGFHKHMRSLIKWCV 721
R IP ELL+RF++V ++YG LL+ KTKQPL R EAL+A++RLRVHI C SD+P +LYFE GKD T L+RC RG NDLEGFH HMR L+ WC+
Sbjct: 381 RLIPRPAELLKRFDVVNNLYGGLLDKKTKQPLFRAEALEAIKRLRVHIMNDCCSDAPNEALYFEAGKDAETLCPLFRCIRGTNDLEGFHLHMRLLVAWCI 480
BLAST of mRNA_F-serratus_M_contig75.18777.1 vs. uniprot
Match: A0A1Y2A9B5_9FUNG (3'-5' exonuclease domain-containing protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2A9B5_9FUNG) HSP 1 Score: 96.7 bits (239), Expect = 3.010e-19 Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = 2
Query: 422 RFIPPSDELLERFNLVVSVYGHLLESKTKQPLLRREALDAVERLRVHIKTGCISDSPAISLYFEKGKDQLTGVTLYRCARGINDLEGFHKHMRSLI 709
R IP +ELL+R++ V + + +L+SKT +PL R V LR HI+ GC+SD P I LYF +G+ G+ +YRCARG N EG+H+HMR L+
Sbjct: 510 RLIPCKEELLKRYDFVCNTFQDILDSKTNEPLFRSNTKKEVRNLRKHIQNGCLSDVPDIPLYFLEGRTS-QGLPIYRCARGTNSNEGYHRHMRKLL 604
BLAST of mRNA_F-serratus_M_contig75.18777.1 vs. uniprot
Match: D7G3Q9_ECTSI (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q9_ECTSI) HSP 1 Score: 92.4 bits (228), Expect = 8.940e-18 Identity = 41/96 (42.71%), Postives = 67/96 (69.79%), Query Frame = 2
Query: 422 RFIPPSDELLERFNLVVSVYGHLLESKTKQPLLRREALDAVERLRVHIKTGCISDSPAISLYFEKGKDQLTGVTLYRCARGINDLEGFHKHMRSLI 709
R +PP ELL+RF+ VV +G+ +++ +K+ LLR +++ AV LR HI GC+SD +++Y+ GK G+ YRC RG ND+EG+H+++R+L+
Sbjct: 620 RLVPPPSELLKRFDKVVQEFGNCVDNISKEVLLRPKSMKAVSLLRKHIVAGCLSDPDGVAMYYAVGKTT-DGLVNYRCVRGTNDVEGYHRYLRTLL 714
BLAST of mRNA_F-serratus_M_contig75.18777.1 vs. uniprot
Match: A0A0C9T7S3_PAXIN (Uncharacterized protein n=1 Tax=Paxillus involutus ATCC 200175 TaxID=664439 RepID=A0A0C9T7S3_PAXIN) HSP 1 Score: 91.7 bits (226), Expect = 1.860e-17 Identity = 46/98 (46.94%), Postives = 62/98 (63.27%), Query Frame = 2
Query: 422 RFIPPSDELLERFNLVVSVYGHLLESKTKQPLLRREALDAVERLRVHIKTGCISDSPAISLYFEKGKDQLTGVTLYRCARGINDLEGFHKHMRSLIKW 715
R++PP++ LL R V+ +G L +S T QPL +A DA + + HI+ G SD P +SLYFE GKD+ G+TLYRC RG NDLEG H + +W
Sbjct: 1247 RYVPPAEILLSRVAAVIQTFGPLKDSTTGQPLFNEKAWDAAKNILEHIRGGYYSDPPGVSLYFEVGKDK-HGLTLYRCCRGTNDLEG-GVHQNLIRRW 1342
BLAST of mRNA_F-serratus_M_contig75.18777.1 vs. uniprot
Match: A0A6H5JRJ6_9PHAE (3'-5' exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ6_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 8.020e-17 Identity = 41/99 (41.41%), Postives = 69/99 (69.70%), Query Frame = 2
Query: 413 SGSRFIPPSDELLERFNLVVSVYGHLLESKTKQPLLRREALDAVERLRVHIKTGCISDSPAISLYFEKGKDQLTGVTLYRCARGINDLEGFHKHMRSLI 709
S R +P D LL+RF+ V+ +G +++ + + LLR +A+ AV +LR HI+ C+SD +++YF GK++ G+T YRC RG ND+EG+H+++R+L+
Sbjct: 573 SSRRLVPRRDVLLKRFDRVIEEFGGCVDNTSGEVLLRPKAMKAVRQLRKHIENDCLSDPDGMAMYFAIGKNK-HGLTDYRCVRGTNDVEGYHRYLRTLL 670
BLAST of mRNA_F-serratus_M_contig75.18777.1 vs. uniprot
Match: A0A6H5JPK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPK9_9PHAE) HSP 1 Score: 88.2 bits (217), Expect = 2.100e-16 Identity = 42/96 (43.75%), Postives = 63/96 (65.62%), Query Frame = 2
Query: 422 RFIPPSDELLERFNLVVSVYGHLLESKTKQPLLRREALDAVERLRVHIKTGCISDSPAISLYFEKGKDQLTGVTLYRCARGINDLEGFHKHMRSLI 709
R +P LLERFNLV+ + ++++K+ + LLR A AVE LR HI++GC+SD + LY+ GK+ G+T RC RG N EG+H+++R L+
Sbjct: 256 RLVPEQKRLLERFNLVIRQFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSDPERVPLYYTSGKNS-AGITTRRCVRGTNCTEGYHRYVRRLL 350
BLAST of mRNA_F-serratus_M_contig75.18777.1 vs. uniprot
Match: A0A6H5K811_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K811_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 8.630e-16 Identity = 42/96 (43.75%), Postives = 62/96 (64.58%), Query Frame = 2
Query: 422 RFIPPSDELLERFNLVVSVYGHLLESKTKQPLLRREALDAVERLRVHIKTGCISDSPAISLYFEKGKDQLTGVTLYRCARGINDLEGFHKHMRSLI 709
R +P + LL RF+ V+S + ++KT Q LL A+ AV LR HI+ GC SD + LYFE+GK TG+T +RC RG N EG+H+++++L+
Sbjct: 330 RRVPAPEVLLARFDAVISACKDIRDAKTGQVLLSPAAMKAVGLLREHIRLGCFSDPVGVPLYFERGKTS-TGLTRFRCVRGTNSTEGYHRYLKTLL 424
BLAST of mRNA_F-serratus_M_contig75.18777.1 vs. uniprot
Match: A0A6H5KLP1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLP1_9PHAE) HSP 1 Score: 84.7 bits (208), Expect = 3.790e-15 Identity = 41/96 (42.71%), Postives = 61/96 (63.54%), Query Frame = 2
Query: 422 RFIPPSDELLERFNLVVSVYGHLLESKTKQPLLRREALDAVERLRVHIKTGCISDSPAISLYFEKGKDQLTGVTLYRCARGINDLEGFHKHMRSLI 709
R +P LLERFNLV+ + ++++K+ + LLR A AVE LR HI++GC+SD + LY+ K G+T RC RG N EG+H+++R L+
Sbjct: 256 RLVPEQKRLLERFNLVIRQFQDVVDAKSGETLLRPCARQAVELLRKHIESGCLSDPERVPLYYTKS----AGITTRRCVRGTNCTEGYHRYLRRLL 347 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig75.18777.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig75.18777.1 >prot_F-serratus_M_contig75.18777.1 ID=prot_F-serratus_M_contig75.18777.1|Name=mRNA_F-serratus_M_contig75.18777.1|organism=Fucus serratus male|type=polypeptide|length=151bp GAPGGGTEQDGGQTSAGGSSSGAACTTSGSSDPLFTTPSEGFFSVRLAGMback to top mRNA from alignment at F-serratus_M_contig75:885575..886902- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig75.18777.1 ID=mRNA_F-serratus_M_contig75.18777.1|Name=mRNA_F-serratus_M_contig75.18777.1|organism=Fucus serratus male|type=mRNA|length=1328bp|location=Sequence derived from alignment at F-serratus_M_contig75:885575..886902- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig75:885575..886902- >mRNA_F-serratus_M_contig75.18777.1 ID=mRNA_F-serratus_M_contig75.18777.1|Name=mRNA_F-serratus_M_contig75.18777.1|organism=Fucus serratus male|type=CDS|length=906bp|location=Sequence derived from alignment at F-serratus_M_contig75:885575..886902- (Fucus serratus male)back to top |