prot_F-serratus_M_contig742.18684.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig742.18684.1
Unique Nameprot_F-serratus_M_contig742.18684.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length166
Homology
BLAST of mRNA_F-serratus_M_contig742.18684.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 4.580e-42
Identity = 85/166 (51.20%), Postives = 109/166 (65.66%), Query Frame = 0
Query:    1 MRRPETVGELMKFLQVANWTSLSLPQMAEVVAPLRPSMKPRLKGT-SKMKRVASRRVITGGDWTPERVEVWDNSRDMWMNAVELSFRRPDDCRVLMFPDASDLFCGCCLTQGPNKELVAGLSFMNISHEPLAFLSGVFRGSQLCWPTVDKKSFASLSAFQRVPYLV 165
            +RRPET GELM+FLQ  NW   SLP+M+E+VAPLR  ++  + G  ++ KRVAS R I    WTP  VE W+ ++DM  NAV L +       VLMFPDASD   G  +TQ P  E+   +   ++SHEPL FLSG FRGSQL W TVDK+ FA +S F+R+ YL+
Sbjct:  880 LRRPETAGELMQFLQAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTL-YHPVAGKAVLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLL 1044          
BLAST of mRNA_F-serratus_M_contig742.18684.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 1.060e-38
Identity = 84/167 (50.30%), Postives = 106/167 (63.47%), Query Frame = 0
Query:    1 MRRPETVGELMKFLQVANWTSLSLPQMAEVVAPLRPSMKPRLKGT-SKMKRVASRRVITGGDWTPERVEVWDNSRDMWMNAVELSFRRPDDCRVLMFPDASDLFCGCCLTQGPNKELVAGLSFMNISHEPLAFLSGVFRGSQLC-WPTVDKKSFASLSAFQRVPYLV 165
            MRRPET GELM+FLQ  NW   SLP+MAEVV PLR  ++  L G  S+ KRVA  R I     TP  VE W  ++D+   AV LS   P  C VLMFPDASD   G  LTQ P  +L  G+   +++HEP+ FLSG F+G+Q   W TVDK+ +A +S F+R+ YL+
Sbjct:  978 MRRPETAGELMQFLQAVNWLRTSLPRMAEVVWPLRVFLEQHLVGAKSRTKRVAENRAIAADALTPALVEAWTAAQDLVARAVALSHPSPG-CAVLMFPDASDEHWGSFLTQVPQDQLDRGVPVEDMAHEPMGFLSGTFKGAQQQRWATVDKEGYAIVSTFKRLEYLL 1143          
BLAST of mRNA_F-serratus_M_contig742.18684.1 vs. uniprot
Match: A0A6H5JCX8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX8_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 1.080e-33
Identity = 73/153 (47.71%), Postives = 96/153 (62.75%), Query Frame = 0
Query:   14 LQVANWTSLSLPQMAEVVAPLRPSMKPRLKGT-SKMKRVASRRVITGGDWTPERVEVWDNSRDMWMNAVELSFRRPDDCRVLMFPDASDLFCGCCLTQGPNKELVAGLSFMNISHEPLAFLSGVFRGSQLCWPTVDKKSFASLSAFQRVPYLV 165
            +   NW   SLP+M+E+VAPLR  ++  + G  ++ KRVAS R I    WTP  VE W+ ++DM  NAV L +       VLMFPDASD   G  +TQ P  E+   +   ++SHEPL FLSG FRGSQL W TVDK+ FA +S F+R+ YL+
Sbjct:  117 ISAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTL-YHPVAGKAVLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLL 268          
BLAST of mRNA_F-serratus_M_contig742.18684.1 vs. uniprot
Match: A0A6H5L028_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L028_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 4.690e-24
Identity = 65/164 (39.63%), Postives = 92/164 (56.10%), Query Frame = 0
Query:    1 MRRPETVGELMKFLQVANWTSLSLPQMAEVVAPLRPSMKPRLKGTSKM-KRVASRRVITGGDWTPERVEVWDNSRDMWMNAVELSFRRPDDCRVLMFPDASDLFCGCCLTQGPNKELVAGLSFMNISHEPLAFLSGVFRGSQLCWPTVDKKSFASLSAFQRVPY 163
            MRRPET G+LM+FLQ   W   SL ++AEV+ P+R  ++  +    +  K +A  R I    WT   VE W +++D+  +AV LS  + D   VLMFPDAS+   G  LTQ P +EL  G+S  +++HEPLAFLS   R      P+    +  S    +RV +
Sbjct:  631 MRRPETAGKLMQFLQAVKWLRTSLSRLAEVMEPVRTLLEVNMASAPRQTKSIAPNRAIKCEAWTAGMVEAWISAQDLVAHAVALSHPK-DGFAVLMFPDASEEHWGSFLTQVPQEELERGVSVEHMTHEPLAFLSVKVRAVAGFAPSKPDDTMPSKEVIRRVQH 793          
BLAST of mRNA_F-serratus_M_contig742.18684.1 vs. uniprot
Match: A0A6A4ZJ35_9STRA (Uncharacterized protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZJ35_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 3.010e-21
Identity = 59/163 (36.20%), Postives = 88/163 (53.99%), Query Frame = 0
Query:    4 PETVGELMKFLQVANWTSLSLPQMAEVVAPLRPSMKPRLKGTSKMKRVASRRV-ITGGDWTPERVEVWDNSRDMWMNAVELSFRRPDDCRVLMFPDASDLFCGCCLTQGPNKELVAGLSFMNISHEPLAFLSGVFRGSQLCWPTVDKKSFASLSAFQRVPYLV 165
            P+T  +L +FL   NW   ++PQ  E+VAPL   M    K     K+ A  RV ++   W  + +  ++  +      V LS   PD   V ++ DAS+ F G   TQ P+++L   L   +  HEPLAFLSG FRGS   WP V+K++FA + + +R+ YL+
Sbjct:  576 PQTAADLQQFLCATNWMRANIPQYTELVAPLTRLMDIAAKAADSRKKTALTRVALSSVGWAEDHLTCFERVKATLQRMVPLSHPDPDKM-VCLYTDASEGFWGAVATQVPSEDLA--LPANDQRHEPLAFLSGAFRGSSERWPIVEKEAFAVVESCKRLEYLL 735          
BLAST of mRNA_F-serratus_M_contig742.18684.1 vs. uniprot
Match: A0A6A5AIE2_9STRA (RT_RNaseH domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AIE2_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 3.040e-21
Identity = 59/163 (36.20%), Postives = 89/163 (54.60%), Query Frame = 0
Query:    4 PETVGELMKFLQVANWTSLSLPQMAEVVAPLRPSMKPRLKGTSKMKRVASRRV-ITGGDWTPERVEVWDNSRDMWMNAVELSFRRPDDCRVLMFPDASDLFCGCCLTQGPNKELVAGLSFMNISHEPLAFLSGVFRGSQLCWPTVDKKSFASLSAFQRVPYLV 165
            P+T  +L +FL   NW   ++PQ  E+VAPL   +    K     K+ A  RV ++   W+ + +E +D  ++     V LS   PD   V ++ DAS+ F G   TQ P ++L    S     HEPLAFLSG FRG+   WP V+K++FA + + +R+ YL+
Sbjct:  274 PQTAADLQQFLCATNWMRGNIPQYTELVAPLTKLLDIAAKAADSRKKTALTRVALSSVGWSGDHLECFDRIKETLKRMVPLSHPDPDKM-VCLYTDASEGFWGAVATQVPVEDLALPASDQR--HEPLAFLSGSFRGASGRWPIVEKEAFAVVESCKRLEYLL 433          
BLAST of mRNA_F-serratus_M_contig742.18684.1 vs. uniprot
Match: A0A6G0WP84_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WP84_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 3.020e-19
Identity = 59/165 (35.76%), Postives = 87/165 (52.73%), Query Frame = 0
Query:    4 PETVGELMKFLQVANWTSLSLPQMAEVVAPLRPSMKPRLKGTSKMKRVASRRV-ITGGDWTPERVEVWDNSRDMWMNAVELSFRRPDDCRVLMFPDASDLFCGCCLTQGP--NKELVAGLSFMNISHEPLAFLSGVFRGSQLCWPTVDKKSFASLSAFQRVPYLV 165
            P+T  EL +FL   NW  + +P+ + +VAPL        K  +  K+ A  RV ++   W  +  E +++ +      V L+   PD   V ++ DASD F G   TQ P  + ELVA        HEPLAFLSG FRG+   WP V+K++FA +   +R+ YL+
Sbjct:  236 PQTAAELQQFLCATNWMRVKIPEYSALVAPLTKLSDIGAKAAASRKKTALARVSLSSIGWCEDHAECFESVKTTLQRMVPLAHPDPDKM-VCLYTDASDGFWGAIATQVPLDDLELVASEQ----RHEPLAFLSGAFRGASERWPIVEKEAFAVVELCKRLEYLL 395          
BLAST of mRNA_F-serratus_M_contig742.18684.1 vs. uniprot
Match: A0A6G0WPP4_9STRA (Reverse transcriptase domain-containing protein n=3 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WPP4_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 3.160e-19
Identity = 58/165 (35.15%), Postives = 89/165 (53.94%), Query Frame = 0
Query:    4 PETVGELMKFLQVANWTSLSLPQMAEVVAPLRPSMKPRLKGTSKMKRVASRRV-ITGGDWTPERVEVWDNSRDMWMNAVELSFRRPDDCRVLMFPDASDLFCGCCLTQGP--NKELVAGLSFMNISHEPLAFLSGVFRGSQLCWPTVDKKSFASLSAFQRVPYLV 165
            P+T  EL +FL   NW   ++P+ + +VAPL   +    K  +  K+ A  RV ++   W  +  E +++ +      V L+   P+   V ++ DASD F G   TQ P  + ELVA        HEPLAFLSG FRG+   WP V+K++FA + + +R+ YL+
Sbjct:  932 PQTAAELQQFLCATNWMRANIPEYSALVAPLTKLLDIGAKAAASRKKTALARVSLSSIGWCEDHAECFESVKTTLQRMVPLAHPDPEKM-VCLYTDASDGFWGAIATQVPLDDLELVASEQ----RHEPLAFLSGAFRGASERWPIVEKEAFAVVESCKRLEYLL 1091          
BLAST of mRNA_F-serratus_M_contig742.18684.1 vs. uniprot
Match: A0A6G0WUU6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUU6_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 4.240e-19
Identity = 58/167 (34.73%), Postives = 94/167 (56.29%), Query Frame = 0
Query:    1 MRRPETVGELMKFLQVANWTSLSLPQMAEVVAPLRPSMKPRLKGTS--KMKRVASRRVITGGDWTPERVEVWDNSRDMWMNAVELSFRRPDDCRVLMFPDASDLFCGCCLTQGPNKELVAGLSFMNISHEPLAFLSGVFRGSQLCWPTVDKKSFASLSAFQRVPYLV 165
            M  P T  +LM+FL   NW    +P+  EVVAPL  +++ R+   S  K K+   + V+    ++      +D+ ++   ++V+L+   P    V +FPDAS  F G  +TQ P  +L   LS  +  HEPLAFLSG FRGSQ+ W  ++K++F+ +   +R+ +L+
Sbjct:  284 MSLPRTGADLMQFLCAVNWMRSHIPRYNEVVAPLMAALQ-RVHSQSGLKTKKKLEKFVLPADFFSDAEKTNYDHIKEQLSSSVKLAHHDPSKM-VCVFPDASLRFWGAIVTQVPMNQL--SLSIDSQDHEPLAFLSGPFRGSQMAWSIIEKEAFSIVETCKRMDFLL 446          
BLAST of mRNA_F-serratus_M_contig742.18684.1 vs. uniprot
Match: A0A6G0WN36_9STRA (RNA-directed DNA polymerase n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WN36_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 5.960e-19
Identity = 58/167 (34.73%), Postives = 94/167 (56.29%), Query Frame = 0
Query:    1 MRRPETVGELMKFLQVANWTSLSLPQMAEVVAPLRPSMKPRLKGTS--KMKRVASRRVITGGDWTPERVEVWDNSRDMWMNAVELSFRRPDDCRVLMFPDASDLFCGCCLTQGPNKELVAGLSFMNISHEPLAFLSGVFRGSQLCWPTVDKKSFASLSAFQRVPYLV 165
            M  P T  +LM+FL   NW    +P+  EVVAPL  +++ R+   S  K K+   + V+    ++      +D+ ++   ++V+L+   P    V +FPDAS  F G  +TQ P  +L   LS  +  HEPLAFLSG FRGSQ+ W  ++K++F+ +   +R+ +L+
Sbjct:  692 MSLPRTGADLMQFLCAVNWMRSHIPRYNEVVAPLMAALQ-RVYSQSGLKTKKKLEKFVLPADFFSDAEKTNYDHIKEQLSSSVKLAHHDPSKM-VCVFPDASLRFWGAIVTQVPMNQL--SLSIDSQDHEPLAFLSGPFRGSQMAWSIIEKEAFSIVETCKRMDFLL 854          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig742.18684.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5L7F6_9PHAE4.580e-4251.20Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5A5_9PHAE1.060e-3850.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCX8_9PHAE1.080e-3347.71Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L028_9PHAE4.690e-2439.63CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6A4ZJ35_9STRA3.010e-2136.20Uncharacterized protein (Fragment) n=3 Tax=Aphanom... [more]
A0A6A5AIE2_9STRA3.040e-2136.20RT_RNaseH domain-containing protein (Fragment) n=1... [more]
A0A6G0WP84_9STRA3.020e-1935.76Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6G0WPP4_9STRA3.160e-1935.15Reverse transcriptase domain-containing protein n=... [more]
A0A6G0WUU6_9STRA4.240e-1934.73Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A6G0WN36_9STRA5.960e-1934.73RNA-directed DNA polymerase n=2 Tax=Aphanomyces eu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 1..83
e-value: 1.3E-9
score: 40.1
NoneNo IPR availableGENE3D3.10.20.370coord: 84..164
e-value: 1.3E-9
score: 40.1
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 2..160
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 94..162
e-value: 5.0E-6
score: 26.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig742contigF-serratus_M_contig742:124047..124544 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig742.18684.1mRNA_F-serratus_M_contig742.18684.1Fucus serratus malemRNAF-serratus_M_contig742 123441..124544 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig742.18684.1 ID=prot_F-serratus_M_contig742.18684.1|Name=mRNA_F-serratus_M_contig742.18684.1|organism=Fucus serratus male|type=polypeptide|length=166bp
MRRPETVGELMKFLQVANWTSLSLPQMAEVVAPLRPSMKPRLKGTSKMKR
VASRRVITGGDWTPERVEVWDNSRDMWMNAVELSFRRPDDCRVLMFPDAS
DLFCGCCLTQGPNKELVAGLSFMNISHEPLAFLSGVFRGSQLCWPTVDKK
SFASLSAFQRVPYLV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041373RT_RNaseH