mRNA_F-serratus_M_contig740.18665.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig740.18665.1 vs. uniprot
Match: D7G6R7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R7_ECTSI) HSP 1 Score: 283 bits (724), Expect = 4.130e-83 Identity = 149/273 (54.58%), Postives = 182/273 (66.67%), Query Frame = 1
Query: 1 VSLERRQVKVHFNGWKSRFDEWVDWESSRLAPCGSRSSAKRGGVRRARRA-------CIAVPARRTERVRISRVTDWCIDVSDPQRPILWIISPDAWYKVAGSGWWDFVQPHPLYAFFFEPFRTAFVVASLVARCLIDSPWSDFVAISRRVPHLSSGLFEAHDIIKYHEVVEATVVGMDTLKESKKAGKADDSGEDEQEDGQGTLTASNGDSS--FRSVEVKYALFLKELRVKAEEWKANGRSFEQRVQVAPPPVPPLPARGTTKALTDGRLF 792
VS ER+QVKVHFNGWKS+FDEW+DWES RLAPCGSRSSAKR G + A C+ VPARRT R+RI+ V DWCID SD P+LWIIS AWYKVAGSGWWDFV PHP+YA FEP R +F + LVAR L SP S A+ RRV ++SG+FE DI++ HEVV AT+ GM L KK A+ + EDG G+ +NGD++ SV+ K LFLKEL K +EW+ANGRSF +R PP PP+P+ T+ + R+
Sbjct: 89 VSEERKQVKVHFNGWKSKFDEWMDWESFRLAPCGSRSSAKREGESASTAARKESLTRCVLVPARRTVRIRINCVDDWCIDYSDTNHPVLWIISGHAWYKVAGSGWWDFVAPHPIYAPVFEPSRKSFALTCLVARALQSSPTSSLAAVGRRVSQITSGVFETRDIVEEHEVVAATIAGMGALSTKKKPDNAEGMLDGGGEDGPGSWPGANGDNNGCSDSVDAKDTLFLKELGTKGQEWEANGRSFVRR-----PPPPPIPSPAITRPPPNSRML 356
BLAST of mRNA_F-serratus_M_contig740.18665.1 vs. uniprot
Match: A0A6H5L351_9PHAE (DNMT1-RFD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L351_9PHAE) HSP 1 Score: 275 bits (703), Expect = 2.650e-80 Identity = 143/247 (57.89%), Postives = 170/247 (68.83%), Query Frame = 1
Query: 1 VSLERRQVKVHFNGWKSRFDEWVDWESSRLAPCGSRSSAKRGGVRRARRA-------CIAVPARRTERVRISRVTDWCIDVSDPQRPILWIISPDAWYKVAGSGWWDFVQPHPLYAFFFEPFRTAFVVASLVARCLIDSPWSDFVAISRRVPHLSSGLFEAHDIIKYHEVVEATVVGMDTLKESKKAGKADDSGEDEQEDGQGTLTASNGDS--SFRSVEVKYALFLKELRVKAEEWKANGRSFEQR 714
VS ER+QVKVHFNGWKS+FDEW+DWES RLAPCGSRSSAKR G + A C+ VPARRT R+RI+ V DWCID SD P+LWIIS AWYKVAGSGWWDFV PHP+YA FEP R +F + LVAR L SP S A+ RRV ++SG+FE DI++ HEVV AT+ GM L KK A+ + EDG G+ +NGD+ S SV+ K LFLKEL K +EW+ANGRSF +R
Sbjct: 210 VSEERKQVKVHFNGWKSKFDEWMDWESFRLAPCGSRSSAKREGESASTAARKESLTRCVLVPARRTVRIRINCVDDWCIDYSDTNHPVLWIISGHAWYKVAGSGWWDFVAPHPIYAPVFEPSRKSFALTCLVARALQSSPTSSLAAVGRRVSQITSGVFETRDIVEEHEVVAATIAGMGALSTKKKPDNAEGMLDGVGEDGPGSWPGANGDNNGSSDSVDAKDTLFLKELATKGQEWEANGRSFVRR 456
BLAST of mRNA_F-serratus_M_contig740.18665.1 vs. uniprot
Match: A0A8K1CUW3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUW3_PYTOL) HSP 1 Score: 58.5 bits (140), Expect = 7.800e-6 Identity = 35/88 (39.77%), Postives = 51/88 (57.95%), Query Frame = 1
Query: 181 RVRISRVTDWCIDVSDPQRPILWIISPDAWYKVAG--SGWWDFVQPHPLYAFFFEPFRTAFVVASLVARCLIDSPWSDFVAISRRVPH 438
RV + +TDWC+D S+ P LW+I+P AWYK+AG SG V PHP Y F+ R F + LVA L +++ I+++V +
Sbjct: 695 RVWLPEITDWCLDYSEGD-PTLWVITPHAWYKIAGPLSG----VLPHPSYRTKFQHVRKLFEASYLVAYVL-----KEWLPINKKVSY 772
BLAST of mRNA_F-serratus_M_contig740.18665.1 vs. uniprot
Match: A0A0P1AKP8_PLAHL (CREB binding protein/P300 and related TAZ Zn-finger proteins n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AKP8_PLAHL) HSP 1 Score: 58.2 bits (139), Expect = 1.040e-5 Identity = 34/88 (38.64%), Postives = 51/88 (57.95%), Query Frame = 1
Query: 181 RVRISRVTDWCIDVSDPQRPILWIISPDAWYKVAG--SGWWDFVQPHPLYAFFFEPFRTAFVVASLVARCLIDSPWSDFVAISRRVPH 438
RV + VTDWC+D ++ P LW+I+P AWYK+AG SG + PHP Y F+ R F + LVA L +++ I+++V +
Sbjct: 679 RVWLPEVTDWCLDYAEGD-PTLWVITPHAWYKIAGPLSG----LLPHPSYRHIFQHVRCLFEASYLVAYVL-----KEWLPINKKVSY 756
BLAST of mRNA_F-serratus_M_contig740.18665.1 vs. uniprot
Match: A0A484E7M7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7M7_BRELC) HSP 1 Score: 56.6 bits (135), Expect = 3.280e-5 Identity = 32/71 (45.07%), Postives = 42/71 (59.15%), Query Frame = 1
Query: 181 RVRISRVTDWCIDVSDPQRPILWIISPDAWYKVAG--SGWWDFVQPHPLYAFFFEPFRTAFVVASLVARCL 387
RV + +TDWC+D +D P LW+I+P AWYK+AG SG + PHP Y F+ R F + LVA L
Sbjct: 659 RVWLPEITDWCLDYADGD-PTLWVITPHAWYKIAGPLSG----LLPHPSYRQTFKHVRYLFEASYLVAYVL 724
BLAST of mRNA_F-serratus_M_contig740.18665.1 vs. uniprot
Match: A0A8J5JCL9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5JCL9_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 4.370e-5 Identity = 33/88 (37.50%), Postives = 51/88 (57.95%), Query Frame = 1
Query: 181 RVRISRVTDWCIDVSDPQRPILWIISPDAWYKVAG--SGWWDFVQPHPLYAFFFEPFRTAFVVASLVARCLIDSPWSDFVAISRRVPH 438
RV + +TDWC+D ++ P LW+I+P AWYK+AG SG + PHP Y F+ R F + LVA L +++ I+++V +
Sbjct: 637 RVWLPEITDWCLDYAEGD-PTLWVITPHAWYKIAGPLSG----LLPHPSYRHTFKHVRYLFEASYLVAYVL-----KEWLPINKKVSY 714
BLAST of mRNA_F-serratus_M_contig740.18665.1 vs. uniprot
Match: A0A329T510_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T510_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 4.380e-5 Identity = 33/88 (37.50%), Postives = 51/88 (57.95%), Query Frame = 1
Query: 181 RVRISRVTDWCIDVSDPQRPILWIISPDAWYKVAG--SGWWDFVQPHPLYAFFFEPFRTAFVVASLVARCLIDSPWSDFVAISRRVPH 438
RV + +TDWC+D ++ P LW+I+P AWYK+AG SG + PHP Y F+ R F + LVA L +++ I+++V +
Sbjct: 677 RVWLPEITDWCLDYAEGD-PTLWVITPHAWYKIAGPLSG----LLPHPSYRHTFKHVRYLFEASYLVAYVL-----KEWLPINKKVSY 754
BLAST of mRNA_F-serratus_M_contig740.18665.1 vs. uniprot
Match: A0A5D6YQF5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YQF5_9STRA) HSP 1 Score: 56.2 bits (134), Expect = 4.390e-5 Identity = 32/71 (45.07%), Postives = 42/71 (59.15%), Query Frame = 1
Query: 181 RVRISRVTDWCIDVSDPQRPILWIISPDAWYKVAG--SGWWDFVQPHPLYAFFFEPFRTAFVVASLVARCL 387
RV + +TDWC+D S+ P LW+I+P AWYK+AG SG + PHP Y F+ R F + LVA L
Sbjct: 722 RVWLPEITDWCLDYSEGD-PTLWVITPHAWYKIAGPLSG----LLPHPHYRETFKHVRMLFEASYLVAYVL 787 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig740.18665.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig740.18665.1 >prot_F-serratus_M_contig740.18665.1 ID=prot_F-serratus_M_contig740.18665.1|Name=mRNA_F-serratus_M_contig740.18665.1|organism=Fucus serratus male|type=polypeptide|length=302bp VSLERRQVKVHFNGWKSRFDEWVDWESSRLAPCGSRSSAKRGGVRRARRAback to top mRNA from alignment at F-serratus_M_contig740:343409..346621+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig740.18665.1 ID=mRNA_F-serratus_M_contig740.18665.1|Name=mRNA_F-serratus_M_contig740.18665.1|organism=Fucus serratus male|type=mRNA|length=3213bp|location=Sequence derived from alignment at F-serratus_M_contig740:343409..346621+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig740:343409..346621+ >mRNA_F-serratus_M_contig740.18665.1 ID=mRNA_F-serratus_M_contig740.18665.1|Name=mRNA_F-serratus_M_contig740.18665.1|organism=Fucus serratus male|type=CDS|length=1812bp|location=Sequence derived from alignment at F-serratus_M_contig740:343409..346621+ (Fucus serratus male)back to top |