prot_F-serratus_M_contig740.18665.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig740.18665.1
Unique Nameprot_F-serratus_M_contig740.18665.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length302
Homology
BLAST of mRNA_F-serratus_M_contig740.18665.1 vs. uniprot
Match: D7G6R7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R7_ECTSI)

HSP 1 Score: 283 bits (724), Expect = 4.130e-83
Identity = 149/273 (54.58%), Postives = 182/273 (66.67%), Query Frame = 0
Query:    1 VSLERRQVKVHFNGWKSRFDEWVDWESSRLAPCGSRSSAKRGGVRRARRA-------CIAVPARRTERVRISRVTDWCIDVSDPQRPILWIISPDAWYKVAGSGWWDFVQPHPLYAFFFEPFRTAFVVASLVARCLIDSPWSDFVAISRRVPHLSSGLFEAHDIIKYHEVVEATVVGMDTLKESKKAGKADDSGEDEQEDGQGTLTASNGDSS--FRSVEVKYALFLKELRVKAEEWKANGRSFEQRVQVAPPPVPPLPARGTTKALTDGRLF 264
            VS ER+QVKVHFNGWKS+FDEW+DWES RLAPCGSRSSAKR G   +  A       C+ VPARRT R+RI+ V DWCID SD   P+LWIIS  AWYKVAGSGWWDFV PHP+YA  FEP R +F +  LVAR L  SP S   A+ RRV  ++SG+FE  DI++ HEVV AT+ GM  L   KK   A+   +   EDG G+   +NGD++    SV+ K  LFLKEL  K +EW+ANGRSF +R     PP PP+P+   T+   + R+ 
Sbjct:   89 VSEERKQVKVHFNGWKSKFDEWMDWESFRLAPCGSRSSAKREGESASTAARKESLTRCVLVPARRTVRIRINCVDDWCIDYSDTNHPVLWIISGHAWYKVAGSGWWDFVAPHPIYAPVFEPSRKSFALTCLVARALQSSPTSSLAAVGRRVSQITSGVFETRDIVEEHEVVAATIAGMGALSTKKKPDNAEGMLDGGGEDGPGSWPGANGDNNGCSDSVDAKDTLFLKELGTKGQEWEANGRSFVRR-----PPPPPIPSPAITRPPPNSRML 356          
BLAST of mRNA_F-serratus_M_contig740.18665.1 vs. uniprot
Match: A0A6H5L351_9PHAE (DNMT1-RFD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L351_9PHAE)

HSP 1 Score: 275 bits (703), Expect = 2.650e-80
Identity = 143/247 (57.89%), Postives = 170/247 (68.83%), Query Frame = 0
Query:    1 VSLERRQVKVHFNGWKSRFDEWVDWESSRLAPCGSRSSAKRGGVRRARRA-------CIAVPARRTERVRISRVTDWCIDVSDPQRPILWIISPDAWYKVAGSGWWDFVQPHPLYAFFFEPFRTAFVVASLVARCLIDSPWSDFVAISRRVPHLSSGLFEAHDIIKYHEVVEATVVGMDTLKESKKAGKADDSGEDEQEDGQGTLTASNGDS--SFRSVEVKYALFLKELRVKAEEWKANGRSFEQR 238
            VS ER+QVKVHFNGWKS+FDEW+DWES RLAPCGSRSSAKR G   +  A       C+ VPARRT R+RI+ V DWCID SD   P+LWIIS  AWYKVAGSGWWDFV PHP+YA  FEP R +F +  LVAR L  SP S   A+ RRV  ++SG+FE  DI++ HEVV AT+ GM  L   KK   A+   +   EDG G+   +NGD+  S  SV+ K  LFLKEL  K +EW+ANGRSF +R
Sbjct:  210 VSEERKQVKVHFNGWKSKFDEWMDWESFRLAPCGSRSSAKREGESASTAARKESLTRCVLVPARRTVRIRINCVDDWCIDYSDTNHPVLWIISGHAWYKVAGSGWWDFVAPHPIYAPVFEPSRKSFALTCLVARALQSSPTSSLAAVGRRVSQITSGVFETRDIVEEHEVVAATIAGMGALSTKKKPDNAEGMLDGVGEDGPGSWPGANGDNNGSSDSVDAKDTLFLKELATKGQEWEANGRSFVRR 456          
BLAST of mRNA_F-serratus_M_contig740.18665.1 vs. uniprot
Match: A0A8K1CUW3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CUW3_PYTOL)

HSP 1 Score: 58.5 bits (140), Expect = 7.800e-6
Identity = 35/88 (39.77%), Postives = 51/88 (57.95%), Query Frame = 0
Query:   61 RVRISRVTDWCIDVSDPQRPILWIISPDAWYKVAG--SGWWDFVQPHPLYAFFFEPFRTAFVVASLVARCLIDSPWSDFVAISRRVPH 146
            RV +  +TDWC+D S+   P LW+I+P AWYK+AG  SG    V PHP Y   F+  R  F  + LVA  L      +++ I+++V +
Sbjct:  695 RVWLPEITDWCLDYSEGD-PTLWVITPHAWYKIAGPLSG----VLPHPSYRTKFQHVRKLFEASYLVAYVL-----KEWLPINKKVSY 772          
BLAST of mRNA_F-serratus_M_contig740.18665.1 vs. uniprot
Match: A0A0P1AKP8_PLAHL (CREB binding protein/P300 and related TAZ Zn-finger proteins n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AKP8_PLAHL)

HSP 1 Score: 58.2 bits (139), Expect = 1.040e-5
Identity = 34/88 (38.64%), Postives = 51/88 (57.95%), Query Frame = 0
Query:   61 RVRISRVTDWCIDVSDPQRPILWIISPDAWYKVAG--SGWWDFVQPHPLYAFFFEPFRTAFVVASLVARCLIDSPWSDFVAISRRVPH 146
            RV +  VTDWC+D ++   P LW+I+P AWYK+AG  SG    + PHP Y   F+  R  F  + LVA  L      +++ I+++V +
Sbjct:  679 RVWLPEVTDWCLDYAEGD-PTLWVITPHAWYKIAGPLSG----LLPHPSYRHIFQHVRCLFEASYLVAYVL-----KEWLPINKKVSY 756          
BLAST of mRNA_F-serratus_M_contig740.18665.1 vs. uniprot
Match: A0A484E7M7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E7M7_BRELC)

HSP 1 Score: 56.6 bits (135), Expect = 3.280e-5
Identity = 32/71 (45.07%), Postives = 42/71 (59.15%), Query Frame = 0
Query:   61 RVRISRVTDWCIDVSDPQRPILWIISPDAWYKVAG--SGWWDFVQPHPLYAFFFEPFRTAFVVASLVARCL 129
            RV +  +TDWC+D +D   P LW+I+P AWYK+AG  SG    + PHP Y   F+  R  F  + LVA  L
Sbjct:  659 RVWLPEITDWCLDYADGD-PTLWVITPHAWYKIAGPLSG----LLPHPSYRQTFKHVRYLFEASYLVAYVL 724          
BLAST of mRNA_F-serratus_M_contig740.18665.1 vs. uniprot
Match: A0A8J5JCL9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5JCL9_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 4.370e-5
Identity = 33/88 (37.50%), Postives = 51/88 (57.95%), Query Frame = 0
Query:   61 RVRISRVTDWCIDVSDPQRPILWIISPDAWYKVAG--SGWWDFVQPHPLYAFFFEPFRTAFVVASLVARCLIDSPWSDFVAISRRVPH 146
            RV +  +TDWC+D ++   P LW+I+P AWYK+AG  SG    + PHP Y   F+  R  F  + LVA  L      +++ I+++V +
Sbjct:  637 RVWLPEITDWCLDYAEGD-PTLWVITPHAWYKIAGPLSG----LLPHPSYRHTFKHVRYLFEASYLVAYVL-----KEWLPINKKVSY 714          
BLAST of mRNA_F-serratus_M_contig740.18665.1 vs. uniprot
Match: A0A329T510_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T510_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 4.380e-5
Identity = 33/88 (37.50%), Postives = 51/88 (57.95%), Query Frame = 0
Query:   61 RVRISRVTDWCIDVSDPQRPILWIISPDAWYKVAG--SGWWDFVQPHPLYAFFFEPFRTAFVVASLVARCLIDSPWSDFVAISRRVPH 146
            RV +  +TDWC+D ++   P LW+I+P AWYK+AG  SG    + PHP Y   F+  R  F  + LVA  L      +++ I+++V +
Sbjct:  677 RVWLPEITDWCLDYAEGD-PTLWVITPHAWYKIAGPLSG----LLPHPSYRHTFKHVRYLFEASYLVAYVL-----KEWLPINKKVSY 754          
BLAST of mRNA_F-serratus_M_contig740.18665.1 vs. uniprot
Match: A0A5D6YQF5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YQF5_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 4.390e-5
Identity = 32/71 (45.07%), Postives = 42/71 (59.15%), Query Frame = 0
Query:   61 RVRISRVTDWCIDVSDPQRPILWIISPDAWYKVAG--SGWWDFVQPHPLYAFFFEPFRTAFVVASLVARCL 129
            RV +  +TDWC+D S+   P LW+I+P AWYK+AG  SG    + PHP Y   F+  R  F  + LVA  L
Sbjct:  722 RVWLPEITDWCLDYSEGD-PTLWVITPHAWYKIAGPLSG----LLPHPHYRETFKHVRMLFEASYLVAYVL 787          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig740.18665.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G6R7_ECTSI4.130e-8354.58Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L351_9PHAE2.650e-8057.89DNMT1-RFD domain-containing protein n=1 Tax=Ectoca... [more]
A0A8K1CUW3_PYTOL7.800e-639.77Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0P1AKP8_PLAHL1.040e-538.64CREB binding protein/P300 and related TAZ Zn-finge... [more]
A0A484E7M7_BRELC3.280e-545.07Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A8J5JCL9_9STRA4.370e-537.50Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
A0A329T510_9STRA4.380e-537.50Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
A0A5D6YQF5_9STRA4.390e-545.07Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 218..238
NoneNo IPR availableGENE3D2.30.30.140coord: 1..32
e-value: 2.0E-10
score: 42.5
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 7..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig740contigF-serratus_M_contig740:343409..346620 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig740.18665.1mRNA_F-serratus_M_contig740.18665.1Fucus serratus malemRNAF-serratus_M_contig740 343409..346621 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig740.18665.1 ID=prot_F-serratus_M_contig740.18665.1|Name=mRNA_F-serratus_M_contig740.18665.1|organism=Fucus serratus male|type=polypeptide|length=302bp
VSLERRQVKVHFNGWKSRFDEWVDWESSRLAPCGSRSSAKRGGVRRARRA
CIAVPARRTERVRISRVTDWCIDVSDPQRPILWIISPDAWYKVAGSGWWD
FVQPHPLYAFFFEPFRTAFVVASLVARCLIDSPWSDFVAISRRVPHLSSG
LFEAHDIIKYHEVVEATVVGMDTLKESKKAGKADDSGEDEQEDGQGTLTA
SNGDSSFRSVEVKYALFLKELRVKAEEWKANGRSFEQRVQVAPPPVPPLP
ARGTTKALTDGRLFADNSSGGSGSGGCSNPIDDSRSSGDSRSGGGTDVTP
NG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016197Chromo-like_dom_sf