prot_F-serratus_M_contig736.18593.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig736.18593.1
Unique Nameprot_F-serratus_M_contig736.18593.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length555
Homology
BLAST of mRNA_F-serratus_M_contig736.18593.1 vs. uniprot
Match: A0A6H5K089_9PHAE (S4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K089_9PHAE)

HSP 1 Score: 424 bits (1089), Expect = 2.550e-139
Identity = 243/456 (53.29%), Postives = 303/456 (66.45%), Query Frame = 0
Query:  100 SMVDRSTTRGGDEGQGQIPNSLSADETKPG------ARQSKAITSKHSEENNSVVLE--VRKEDHNAPIDWLLSRRLPIRSRRFYRRALEGGSVKVDGRTVKRFVRVSRGSTISIE-------NVVSAAAGPRDRGSVPATLRSYLYPERLPGLRVLYEDPYCAVVAKPAGTVCQPCEAASSGTVLHGLLHHMVQNNQVEEED---LAAARSLSQGVVQRLDKTTSGVMVVAKSLKAASKFSRMFDDGNTRQEYVAICHGDPGFDSVVDASLYRRSSGKTGAVARSQAAEFGAKDAKTRVRNVATAGGLSLCRADVTDGSMHQVRVHLQWKRCPVLGDKDYGDAEANQRVSRRGSFRVDPGRPLVHSMSLEFTHPFTDKRMSFRAPMPSDMWHPAGVILRASGTPEQLREFAELQESQQRWDVDELQEMQRKPSPIGGRGATRYFSKEGERKGGRG 537
            S + R T  G D+         SA+E+ P       AR + A  +   + N + V+   V  ED+ APIDW+LSRRLP  SRRFYR+ALE G VKVDGR VKRF+RV RG+ IS++                           S ++P+RLP LRV++ED +  VV KPAG +CQPC AA  GTVLHGL++HMVQ+ Q++E      AAA +LSQG+VQRLDK TSG+MVVAK+L A+SK S +F  G  +++Y+A+CHGDPGFDSVVDA LYRRSSGK GAV   +A EF AK+A+TRVRNVATA GLSLCRAD+  G MHQVRVHL+W  CP++GD++YGD EAN RVS+R + R +  RPL+HS+SLEF HPFT+K MSF+APMP DMW  A  ILR SGTPEQ   F +LQE +Q    DE        +P+GGRGA R  +      GGRG
Sbjct:   78 SSLQRLTQPGEDDEDEDKGAFFSAEESLPPTSAPAPARAAPARPAATEDGNTNAVVSTVVSDEDNKAPIDWVLSRRLPQHSRRFYRKALEAGDVKVDGRKVKRFIRVKRGARISVDLGRQXXXXXXXXXXXXXXXXXXXXXXXSLVFPQRLPRLRVVFEDDHLFVVMKPAGMICQPCAAAPRGTVLHGLMYHMVQSGQLKEGADTMAAAANTLSQGIVQRLDKQTSGIMVVAKTLAASSKLSALFRKGKVKKQYLAVCHGDPGFDSVVDAPLYRRSSGKVGAVEPWEAEEFRAKEAQTRVRNVATARGLSLCRADILTGRMHQVRVHLKWIGCPIVGDREYGDPEANFRVSKRSAHRAEVQRPLLHSVSLEFIHPFTNKPMSFKAPMPPDMWETAQNILRMSGTPEQQEAFGKLQELRQS-QADEA-------APVGGRGAPRMAA------GGRG 519          
BLAST of mRNA_F-serratus_M_contig736.18593.1 vs. uniprot
Match: A0A835YI41_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI41_9STRA)

HSP 1 Score: 220 bits (560), Expect = 1.080e-61
Identity = 141/365 (38.63%), Postives = 192/365 (52.60%), Query Frame = 0
Query:  151 VRKEDHNAPIDWLLSRRLPIRSRRFYRRALEGGSVKVDGRTVKRFVRVSRGSTISIENVVSAAAGPRDRGSVPATLRSYLYPERLPGLRVLYEDPYCAVVAKPAGTVCQPCEAASSGTVLHGLLHHMVQNNQVEEEDLAAARSLSQGVVQRLDKTTSGVMVVAKSLKAASKFSRMFDDGNTRQEYVAICHG------------DPGFDSV----VDASLYRRSSGKTGAVARSQ----------AAEFGAKDAKTRVRNVATA-------------GGLSLCRADVTDGSMHQVRVHLQWKRCPVLGDKDY---GDAEANQRVSRRGSFRVDPGRPLVHSMSLEFTHPFTDKRMSFRAPMPSDMW 473
            V +ED NAPIDWLLSR+LP RSRRF+R+ L  G+V++DGR  KR VRV  G TI++    + A  P         L+          L V+YED +  VVAKP G V QP  +   GT+L+G+LHHMV   +    D  AA+ L QGVV RLD+ TSG+++VAK+L+A+S  S MF      + Y+A+  G            D G D      +DA LY+R+SGK       Q          A+    K A TRV+ +  +             GGL   + ++T G  HQ+R HL     PV+GD  Y   GDA A    +R  +  +   RPL+H++SL   HP T+ R+   AP+P+DMW
Sbjct:   10 VEQEDGNAPIDWLLSRKLPHRSRRFFRKQLADGNVQIDGRVNKRLVRVRPGQTITVAAAAADAVAPPSEQLPAQDLK----------LHVVYEDEHIIVVAKPPGIVVQPMASQPRGTLLNGVLHHMVARGECAAGDEVAAQGLLQGVVHRLDRDTSGIVIVAKNLEASSTLSAMFKSRKVSKTYLAVTAGLPNPARCALEPADSGGDGTGPYTIDAPLYKRASGKMAVATPQQLQXXXXXXXXASAIDVKPALTRVKALPRSAAXXXXXXXXXXXGGLRALQVEITTGRQHQIRAHLLHAGAPVIGDVTYCAGGDAGA----ARAAAAALGVARPLLHALSLTLHHPVTNARLVLVAPLPADMW 360          
BLAST of mRNA_F-serratus_M_contig736.18593.1 vs. uniprot
Match: A0A7S3XRN0_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRN0_HETAK)

HSP 1 Score: 209 bits (531), Expect = 1.860e-58
Identity = 126/339 (37.17%), Postives = 189/339 (55.75%), Query Frame = 0
Query:  147 VVLEVRKEDHNAPIDWLLSRRLPIRSRRFYRRALEGGSVKVDGRTVKRFVRVSRGSTIS--IENVVSAAAGPRDRGSVPATLRSYLYPERLPGLRVLYEDPYCAVVAKPAGTVCQPCEAASSGTVLHGLLHHMVQNNQVEEEDLAAARSLSQGVVQRLDKTTSGVMVVAKSLKAASKFSRMFDDGNTRQEYVAICHGDPGFDSVVDASLYRRSSGKTGAVARSQ----AAEFGAKDAKTRVRNVATAGGLSLCRADVTDGSMHQVRVHLQWKRCPVLGDKDYGDAEANQRVSRRGSFRVDPGRPLVHSMSLEFTHPFTDKRMSFRAPMPSDMWHPAGVI 479
            V  EV  E++ AP+DW L+   P +SRR++R+ ++ G VKV+G+TV+RF ++  G  +   IE+      G  +                   L VL+ED     V KPAG VC P ++  SGTVL+GLLHH ++  Q  +    +  +LS+G+V RLDK TSGVM+ AK+ KAA K S+ F+   T + Y+ +C+G     +VV+  +YR  +GK   +++ Q     +E   KD+K+ V+ +    GLSL   ++  G MHQ R+HL++   P+LGD  YG A  N+   +     VD  R L+H+  L   HP T +++   AP+PSDMW   GVI
Sbjct:   58 VSAEVDSENNGAPLDWYLAHSFPQKSRRYFRKKIQDGEVKVNGKTVRRFAKLRTGQVLDLEIEDFAKEIEGAENLS-----------------LSVLFEDDDLVAVLKPAGVVCYPVDSQKSGTVLNGLLHHFLETEQ--QVFANSIETLSKGIVHRLDKDTSGVMIFAKNQKAAKKLSQSFESRETVKRYLGVCYGHVEPKTVVEEPVYRTKNGKMAVLSKKQDTSVISESRVKDSKSVVKCLMHRQGLSLVEVELITGRMHQARLHLKYLGAPILGDPIYGLARVNKDAYQ--DLGVD--RALLHASRLIVQHPRTGEKLDLSAPVPSDMW---GVI 370          
BLAST of mRNA_F-serratus_M_contig736.18593.1 vs. uniprot
Match: A0A7S2USK5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USK5_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.120e-50
Identity = 140/392 (35.71%), Postives = 196/392 (50.00%), Query Frame = 0
Query:  151 VRKEDHNAPIDWLLSRRLPIRSRRFYRRALEGGSVKVDGRTVKRFVRVSRGSTISIENVVSAAAGPRDRGSVPATLRSYLYPERLPGLRVLYEDPYCAVVAKPAGTVCQPCEAASSGTVLHGLLHHMV---------------QNNQ--VEEEDLAAARS----------------------------LSQGVVQRLDKTTSGVMVVAKSLKAASKFSRMFDDGNTRQEYVAICHGD--PGFDSVVDASLYRRSSGKTGAVARSQ----------------------AAEFGAKDAKTRVRNVATAGGLSLCRADVTDGSMHQVRVHL-QWKRCPVLGDKDYGDAEANQRVSRRGSFRVDPGRPLVHSMSLEFTHPFTDKRMSFRAPMPSDM 472
            V K+D + P+D +L+R+ P +SRRF+R+ ++ G VKVD + VKR  ++ +G       +VSA   P ++ S+         PE L GL VL+ED +   VAKP G +  P E+  +GTVLHG+LH +                + NQ   +EED    R                             L+QGVV RLD  TSGV++VAK+  AA   ++ F   + +++Y+A+  GD  PG   +    L R SSGK      +Q                      A   GA+ A T VR +AT G LS+  A++  G MHQ+RVHL Q   CPVLGD  YGD + N+R  R  + +V   R L+H+ SLEFTHP T K +S   P+P DM
Sbjct:   57 VGKKDDDWPLDIVLTRQYPEKSRRFFRKIIQAGRVKVDEKEVKRLSKIRKGQ------LVSAQFKPDEKPSME--------PEDL-GLEVLFEDEHLIAVAKPPGMIVHPVESCETGTVLHGVLHLLTTPREKVTPKETAAQPEGNQENAQEEDTKVERKPEKNAKKGGPDPWDPAKPLKLTARLCTGLAQGVVHRLDSDTSGVVLVAKNAPAARGMAKQFQQRSVKKKYMAVVVGDLGPGVHHLT-LPLLRTSSGKMAVFQEAQPEWGEEMAGGDMLTGDFTDVGEADAKGARGATTIVRRLATDGQLSVVGAEILTGRMHQLRVHLAQEANCPVLGDPVYGDTDWNRRAKRSENLQVS--RTLLHAHSLEFTHPITGKHVSLSTPVPLDM 430          
BLAST of mRNA_F-serratus_M_contig736.18593.1 vs. uniprot
Match: A0A836CH15_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH15_9STRA)

HSP 1 Score: 168 bits (426), Expect = 3.800e-43
Identity = 114/327 (34.86%), Postives = 171/327 (52.29%), Query Frame = 0
Query:  148 VLEVRKEDHNAPIDWLLSRRLPIRSRRFYRRALEGGSVKVDGRT-VKRFVRVSRGSTISIENVVSAAAGPRDRGSVPATLRSYLYPERLPGLRVLYEDPYCAVVAKPAGTVCQPCEAASSGTVLHGLLHHMVQNNQVEEEDLAAARSLSQGVVQRLDKTTSGVMVVAKSLKAASKFSRMFDDGNTRQEYVAICHGDPGFDSVVDASLYRRSSGKTGAVARSQAAEFG-AKDAKTRVRNVATAGGLSLCRADVTDGSMHQVRVHLQWKRCPVLGDKDYGDAEANQRVSRRGSFRVDPGRPLVHSMSLEFTHPFTDKRMSFRAPMPSDM 472
            V E    D    ID  L  ++P +SR ++      G V V+G + VK+  +V+ G  IS+  +              AT    L PE +P L V++ED     +AKP G V  P     +GT ++ LLHH+ ++  V    L  +  L  GVV RLDK TSGV++ AK+     + S++F D   R+ Y+A+C G+PG D  +D  + R ++ +   VA         A+ A + VR  A  G LS+    +  G  HQ+RVHLQ +R P++GD+ YG+ + N+R+ +RG       RPL+H++ LEFTHP T   +   AP+P DM
Sbjct:   55 VFEADLADAGQRIDAFLCSKVPDQSRTYFGDLCTKGCVCVNGSSAVKKSHKVTAGQIISVRFL--------------ATAELNLGPEDIP-LDVIFEDSELLAIAKPPGMVVHPAPGNWNGTFVNALLHHLSKDGSVVS--LGESGDLRPGVVHRLDKGTSGVLLAAKTPIMQKQLSQLFHDRKVRKTYLAVCAGNPG-DDAIDVPIGRHATNRQKMVAVPDIQPGARARRALSHVRCTAFDGSLSVAEVRIETGRTHQIRVHLQHRRTPIVGDELYGNRDWNRRLQKRGI-----SRPLLHALRLEFTHPTTGAALRLEAPLPEDM 358          
BLAST of mRNA_F-serratus_M_contig736.18593.1 vs. uniprot
Match: A0A7S3XXK7_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXK7_HETAK)

HSP 1 Score: 165 bits (417), Expect = 6.810e-42
Identity = 110/327 (33.64%), Postives = 168/327 (51.38%), Query Frame = 0
Query:  151 VRKEDHNAPIDWLLSRRLPIRSRRFYRRALEGGSVKVDGRTVKRFVRVSRGSTISIENVVSAAAGPRDRGSVPATLRSYLYPERLPGLRVLYEDPYCAVVAKPAGTVCQPCEAASSGTVLHGLLHHMVQNNQVEEEDLAAAR---SLSQGVVQRLDKTTSGVMVVAKSLKAASKFSRMFDDGNTRQEYVAICHGDPGFDSVVDASLYR--RSSGKTGAVARSQAAEFGAKDAKTRVRNVATAGGLSLCRADVTDGSMHQVRVHLQWKRCPVLGDKDYGDAEANQRVSRRGSFRVDPGRPLVHSMSLEFTHPFTDKRMSFRAPMPSDM 472
            V +E +   +D  LS   P +SR ++    + G V+V GR VK+  ++  G  +S+  + +A                   PE +P L +LYED +   VAKP G V  P   + SGT  + L  HM        ED  AA    +L  G+V RLDK TSGV++ +K+ +  +K S MF     ++ Y+A+C G+PG D  ++  + R  ++  K   +  +Q     A+ A T V  ++    LSL R  +  G  HQ+RVHL  +R PVLGD+ YG+ + N+R  +R   +    RPL+H+  LE  HP T + +S +AP+P DM
Sbjct:   71 VGEEYNKKRLDAFLSDEFPEQSRSYFGSLCQQGLVRVGGRAVKKSEKLRAGQEVSVAFLPTAEMAAE--------------PEDIP-LDILYEDEHLIAVAKPPGMVVHPAPGSWSGTFANALAFHMRSRG----EDYRAAGGGDALRPGIVHRLDKGTSGVLLASKNSQCHAKLSEMFASRKIKKTYLAVCVGNPGQDVKIENLIARHPKNRQKMCVIHETQEGAARARTAVTLVDGLSFDSQLSLARVQIETGRTHQIRVHLAHRRTPVLGDELYGNGDQNRRAVKRFGLQ----RPLLHAYQLELDHPITGEPLSLKAPVPEDM 374          
BLAST of mRNA_F-serratus_M_contig736.18593.1 vs. uniprot
Match: A0A6M1ZVU5_9BACT (Pseudouridine synthase n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M1ZVU5_9BACT)

HSP 1 Score: 157 bits (398), Expect = 2.800e-40
Identity = 115/340 (33.82%), Postives = 173/340 (50.88%), Query Frame = 0
Query:  145 NSVVLEVRKEDHNAPIDWLLSRRLPIRSRRFYRRALEGGSVKVDGRTVKRFVRVSRGSTISIENVVSAAAGPRDRGSVPATLRSYLYPERLPGLRVLYEDPYCAVVAKPAGTVCQPCEAASSGTVLHGLLHHMVQNNQVEEEDLAAARSLSQGVVQRLDKTTSGVMVVAKSLKAASKFSRMFDDGNTRQEYVAICHGDPGFDSVVDASLYRRSSGKTGAVARSQAA---EFGAKDAKTRVRNVATAGGLSLCRADVTDGSMHQVRVHLQWKRCPVLGDKDYGDAEANQRVSRRGSFRVDPGRPLVHSMSLEFTHPFTDKRMSFRAPMPSDMWHPAGVILR 481
            NS    V +E+    +D LL+ R P  SR ++++ ++   V V+G+ VK+ + +     I I+ V+S                  L PE +P L +LYED    V+ KPAG V  P    SSGT+++GLL H  Q        L AA SL  G+V RLDK TSG++V AK+ +A  K S +F +    +EY+AIC  +PG + ++D  + R        V R +     E G ++A+T   ++   G LSL R     G  HQ+RVHL+  R P+LGD  YG+   N++              L+H+  L F HP + +++ F+AP+P DM      I+R
Sbjct:    2 NSKTHIVTEEEEKLRLDTLLATRFPELSRTYFQQLIDRQLVLVNGKQVKKRIHLRSADEIEIQFVLSPEIS--------------LEPEEIP-LDILYEDEELLVINKPAGLVVHPGAGHSSGTLVNGLLFHCKQ--------LKAAESLRPGIVHRLDKGTSGLLVAAKNEEAQMKLSTLFANRQVHKEYLAICISNPG-NRLIDQPIGRHP------VRRKEMTILKERG-REAQTETHSLVHNGELSLVRLIPKTGRTHQLRVHLKSIRAPILGDPVYGNHYLNKKYGLT--------HQLLHAEILRFVHPISGEKVEFKAPIPEDMQKIIDSIIR 302          
BLAST of mRNA_F-serratus_M_contig736.18593.1 vs. uniprot
Match: A0A2V8G7E2_9BACT (Pseudouridine synthase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8G7E2_9BACT)

HSP 1 Score: 156 bits (394), Expect = 1.670e-39
Identity = 115/340 (33.82%), Postives = 162/340 (47.65%), Query Frame = 0
Query:  149 LEVRKEDHNAPIDWLLSRRLPIRSRRFYRRALEGGSVKVDGRTVKRFVRVSRGSTISIENVVSAAAGPRDRGSVPATLRSYLYPERLPGLRVLYEDPYCAVVAKPAGTVCQPCEAASSGTVLHGLLHHMVQNNQVEEEDLAA-ARSLSQGVVQRLDKTTSGVMVVAKSLKAASKFSRMFDDGNTRQEYVAICHGDPGFDSVVDASLYRRSSGKTGAVARSQAAEFGAKDAKTRVRNVATAGGLSLCRADVTDGSMHQVRVHLQWKRCPVLGDKDYGDAEANQRVSRRGSFRVDPGRPLVHSMSLEFTHPFTDKRMSFRAPMPSDMWHPAGVILRASGTPE 487
            L V  E     +D  L+  LP RSR   +R ++ G V    R ++    V  G   ++E     AA P               PE LP L VLYED    V+ KPAG V  P     SGT+++ LLHH+        +DL+     L  G+V RLD+ TSGVM+VAK  +A  + SR F D    +EY+A+  G       +DA++ R  S +     R++ A    + A TR+       G+SL R  +  G  HQ+RVHL     P++GD  YG          R   R++  RP +H+  L FTHP   +RM+F +P+P+D+      IL A   PE
Sbjct:   10 LRVEAEHDGVRLDNFLTALLPERSRSHIQRLIKDGLVSGPLRDLRPSSTVHAGQVFAVELPAPVAAAPE--------------PEALP-LTVLYEDSDVVVIDKPAGMVVHPGAGHRSGTLVNALLHHV--------DDLSGIGGELRPGIVHRLDRGTSGVMIVAKHDRAHQELSRQFQDREVEKEYIALVWGVVQAGRRIDAAIGRDPSNRQKMSTRARRA----RSAVTRITKAEHLKGVSLLRVAIATGRTHQIRVHLGAIGHPIVGDAVYGGVHRRVANDLRAVQRLE--RPFLHAARLSFTHPADGRRMTFESPLPADLDAVIDDILAAQAEPE 320          
BLAST of mRNA_F-serratus_M_contig736.18593.1 vs. uniprot
Match: A0A2E8E8E4_9BACT (Pseudouridine synthase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2E8E8E4_9BACT)

HSP 1 Score: 155 bits (392), Expect = 3.790e-39
Identity = 109/324 (33.64%), Postives = 158/324 (48.77%), Query Frame = 0
Query:  149 LEVRKEDHNAPIDWLLSRRLPIRSRRFYRRALEGGSVKVDGRTVKRFVRVSRGSTISIENVVSAAAGPRDRGSVPATLRSYLYPERLPGLRVLYEDPYCAVVAKPAGTVCQPCEAASSGTVLHGLLHHMVQNNQVEEEDLAAARSLSQGVVQRLDKTTSGVMVVAKSLKAASKFSRMFDDGNTRQEYVAICHGDPGFDSVVDASLYRRSSGKTGAVARSQAAEFGAKDAKTRVRNVATAGGLSLCRADVTDGSMHQVRVHLQWKRCPVLGDKDYGDAEANQRVSRRGSFRVDPGRPLVHSMSLEFTHPFTDKRMSFRAPMPSDM 472
            LEV  E     +D  ++  LP RSR   +R + GG+V+++ R+V+    V  G  I +E              +PA   S   PE LP + ++++DP   VV KPAG V  P     SGT+++ LLHH+   + +  E          G+V RLD+ TSGVM+VAK   A ++ SR F D    +EY+A+  G       +DA L R    +     R++ A    + A TRV       GL+L    +  G  HQ+RVHL     PV+GD  YG    +     R    +D  RP +HS  + FTHP   +R+ F AP+P D+
Sbjct:   18 LEVAGEHDGTRLDHYITEVLPDRSRSQIQRLIRGGNVRLNQRSVRASHAVHTGDVIDLE--------------IPAPAPSTPVPEALP-ITIVHDDPDLVVVDKPAGMVVHPAVGHESGTLVNALLHHVTGLSGIGGEQRP-------GIVHRLDRGTSGVMLVAKHDTAHAELSRQFADREVEKEYIALVWGLLNTGRRIDAPLGRDPVNRQKMSTRARRA----RSAVTRVTGTERLRGLTLATVAIATGRQHQIRVHLNSIGHPVVGDAVYGGVRRHLAADHRTLASLD--RPFLHSFRIAFTHPRDGRRVEFTAPLPEDL 313          
BLAST of mRNA_F-serratus_M_contig736.18593.1 vs. uniprot
Match: A0A6M2A8C7_9BACT (Pseudouridine synthase n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M2A8C7_9BACT)

HSP 1 Score: 153 bits (387), Expect = 1.020e-38
Identity = 107/325 (32.92%), Postives = 161/325 (49.54%), Query Frame = 0
Query:  148 VLEVRKEDHNAPIDWLLSRRLPIRSRRFYRRALEGGSVKVDGRTVKRFVRVSRGSTISIENVVSAAAGPRDRGSVPATLRSYLYPERLPGLRVLYEDPYCAVVAKPAGTVCQPCEAASSGTVLHGLLHHMVQNNQVEEEDLAAARSLSQGVVQRLDKTTSGVMVVAKSLKAASKFSRMFDDGNTRQEYVAICHGDPGFDSVVDASLYRRSSGKTGAVARSQAAEFGAKDAKTRVRNVATAGGLSLCRADVTDGSMHQVRVHLQWKRCPVLGDKDYGDAEANQRVSRRGSFRVDPGRPLVHSMSLEFTHPFTDKRMSFRAPMPSDM 472
            +L V KE     +D  LS R P  SR++++  +E   V V+G+  K+  ++  G  I IE  +              T    L PE +P L +LYED     V KPAG V  P     +GT +H LL++         + L +  +L  G+V RLDK TSGV++ AK+ +A       F +   ++EY+AIC G+PG + +++ ++ R  + +     R    E G K+A T   ++ T   LS  R     G  HQ+RVHLQ    P+LGD  YG    N++            R L+H+ SL+F HP T+K +  +AP+P DM
Sbjct:    7 LLVVEKEGEGVRLDKFLSTRFPDYSRQYFQYLIETHLVLVNGQIAKKRTKLIEGDEIEIEFAL--------------TKEISLTPEPIP-LTILYEDEEMLAVNKPAGMVVHPAAGNWTGTFVHALLYYC--------QTLPSQETLRPGIVHRLDKETSGVLLAAKTERAQQGLVEAFANQKVKKEYLAICVGNPG-NRLIEGNIGRHPTKRKQMSLR----EEGGKEASTECLSLGTYENLSFVRLFPKTGRTHQLRVHLQSVGTPILGDSVYGIPSQNKKWGSE--------RQLLHAASLQFPHPITEKSIEVKAPIPDDM 295          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig736.18593.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K089_9PHAE2.550e-13953.29S4 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A835YI41_9STRA1.080e-6138.63Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A7S3XRN0_HETAK1.860e-5837.17Pseudouridine synthase n=1 Tax=Heterosigma akashiw... [more]
A0A7S2USK5_9STRA1.120e-5035.71Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A836CH15_9STRA3.800e-4334.86Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A7S3XXK7_HETAK6.810e-4233.64Pseudouridine synthase n=1 Tax=Heterosigma akashiw... [more]
A0A6M1ZVU5_9BACT2.800e-4033.82Pseudouridine synthase n=1 Tax=Chlamydiae bacteriu... [more]
A0A2V8G7E2_9BACT1.670e-3933.82Pseudouridine synthase n=1 Tax=Acidobacteria bacte... [more]
A0A2E8E8E4_9BACT3.790e-3933.64Pseudouridine synthase n=1 Tax=Acidobacteria bacte... [more]
A0A6M2A8C7_9BACT1.020e-3832.92Pseudouridine synthase n=1 Tax=Chlamydiae bacteriu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002942RNA-binding S4 domainSMARTSM00363s4_6coord: 158..215
e-value: 0.0073
score: 25.5
IPR002942RNA-binding S4 domainPROSITEPS50889S4coord: 158..224
score: 10.031
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 146..210
e-value: 7.7E-6
score: 27.3
NoneNo IPR availableGENE3D3.30.2350.10coord: 239..477
e-value: 5.3E-49
score: 168.7
NoneNo IPR availablePANTHERPTHR21600:SF34RNA PSEUDOURIDINE SYNTHASE 2, CHLOROPLASTICcoord: 159..491
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 159..491
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..46
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 42..46
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 30..41
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 47..554
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..29
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 160..208
NoneNo IPR availableTMHMMTMhelixcoord: 25..47
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 248..411
e-value: 8.5E-23
score: 81.2
IPR006224Pseudouridine synthase, RluC/RluD, conserved sitePROSITEPS01129PSI_RLUcoord: 299..313
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 234..474

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig736contigF-serratus_M_contig736:145699..149034 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig736.18593.1mRNA_F-serratus_M_contig736.18593.1Fucus serratus malemRNAF-serratus_M_contig736 145631..149354 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig736.18593.1 ID=prot_F-serratus_M_contig736.18593.1|Name=mRNA_F-serratus_M_contig736.18593.1|organism=Fucus serratus male|type=polypeptide|length=555bp
MPPKSREGVSYFARRYRRNTTSRPIILSRVCAIIHSFCVLQTTGLALVSP
QTRPRQFERPSLGTTKEAAATATRVYSTSIAGRLSVARIEATRCRLTCCS
MVDRSTTRGGDEGQGQIPNSLSADETKPGARQSKAITSKHSEENNSVVLE
VRKEDHNAPIDWLLSRRLPIRSRRFYRRALEGGSVKVDGRTVKRFVRVSR
GSTISIENVVSAAAGPRDRGSVPATLRSYLYPERLPGLRVLYEDPYCAVV
AKPAGTVCQPCEAASSGTVLHGLLHHMVQNNQVEEEDLAAARSLSQGVVQ
RLDKTTSGVMVVAKSLKAASKFSRMFDDGNTRQEYVAICHGDPGFDSVVD
ASLYRRSSGKTGAVARSQAAEFGAKDAKTRVRNVATAGGLSLCRADVTDG
SMHQVRVHLQWKRCPVLGDKDYGDAEANQRVSRRGSFRVDPGRPLVHSMS
LEFTHPFTDKRMSFRAPMPSDMWHPAGVILRASGTPEQLREFAELQESQQ
RWDVDELQEMQRKPSPIGGRGATRYFSKEGERKGGRGSTSSRKAHAAIAA
ADAQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002942S4_RNA-bd
IPR036986S4_RNA-bd_sf
IPR006145PsdUridine_synth_RsuA/RluA
IPR006224PsdUridine_synth_RluC/D_CS
IPR020103PsdUridine_synth_cat_dom_sf