mRNA_F-serratus_M_contig736.18593.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig736.18593.1 vs. uniprot
Match: A0A6H5K089_9PHAE (S4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K089_9PHAE) HSP 1 Score: 424 bits (1089), Expect = 1.530e-137 Identity = 243/456 (53.29%), Postives = 303/456 (66.45%), Query Frame = 3
Query: 366 SMVDRSTTRGGDEGQGQIPNSLSADETKPG------ARQSKAITSKHSEENNSVVLE--VRKEDHNAPIDWLLSRRLPIRSRRFYRRALEGGSVKVDGRTVKRFVRVSRGSTISIE-------NVVSAAAGPRDRGSVPATLRSYLYPERLPGLRVLYEDPYCAVVAKPAGTVCQPCEAASSGTVLHGLLHHMVQNNQVEEED---LAAARSLSQGVVQRLDKTTSGVMVVAKSLKAASKFSRMFDDGNTRQEYVAICHGDPGFDSVVDASLYRRSSGKTGAVARSQAAEFGAKDAKTRVRNVATAGGLSLCRADVTDGSMHQVRVHLQWKRCPVLGDKDYGDAEANQRVSRRGSFRVDPGRPLVHSMSLEFTHPFTDKRMSFRAPMPSDMWHPAGVILRASGTPEQLREFAELQESQQRWDVDELQEMQRKPSPIGGRGATRYFSKEGERKGGRG 1679
S + R T G D+ SA+E+ P AR + A + + N + V+ V ED+ APIDW+LSRRLP SRRFYR+ALE G VKVDGR VKRF+RV RG+ IS++ S ++P+RLP LRV++ED + VV KPAG +CQPC AA GTVLHGL++HMVQ+ Q++E AAA +LSQG+VQRLDK TSG+MVVAK+L A+SK S +F G +++Y+A+CHGDPGFDSVVDA LYRRSSGK GAV +A EF AK+A+TRVRNVATA GLSLCRAD+ G MHQVRVHL+W CP++GD++YGD EAN RVS+R + R + RPL+HS+SLEF HPFT+K MSF+APMP DMW A ILR SGTPEQ F +LQE +Q DE +P+GGRGA R + GGRG
Sbjct: 78 SSLQRLTQPGEDDEDEDKGAFFSAEESLPPTSAPAPARAAPARPAATEDGNTNAVVSTVVSDEDNKAPIDWVLSRRLPQHSRRFYRKALEAGDVKVDGRKVKRFIRVKRGARISVDLGRQXXXXXXXXXXXXXXXXXXXXXXXSLVFPQRLPRLRVVFEDDHLFVVMKPAGMICQPCAAAPRGTVLHGLMYHMVQSGQLKEGADTMAAAANTLSQGIVQRLDKQTSGIMVVAKTLAASSKLSALFRKGKVKKQYLAVCHGDPGFDSVVDAPLYRRSSGKVGAVEPWEAEEFRAKEAQTRVRNVATARGLSLCRADILTGRMHQVRVHLKWIGCPIVGDREYGDPEANFRVSKRSAHRAEVQRPLLHSVSLEFIHPFTNKPMSFKAPMPPDMWETAQNILRMSGTPEQQEAFGKLQELRQS-QADEA-------APVGGRGAPRMAA------GGRG 519
BLAST of mRNA_F-serratus_M_contig736.18593.1 vs. uniprot
Match: A0A835YI41_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI41_9STRA) HSP 1 Score: 220 bits (560), Expect = 1.460e-60 Identity = 141/365 (38.63%), Postives = 192/365 (52.60%), Query Frame = 3
Query: 519 VRKEDHNAPIDWLLSRRLPIRSRRFYRRALEGGSVKVDGRTVKRFVRVSRGSTISIENVVSAAAGPRDRGSVPATLRSYLYPERLPGLRVLYEDPYCAVVAKPAGTVCQPCEAASSGTVLHGLLHHMVQNNQVEEEDLAAARSLSQGVVQRLDKTTSGVMVVAKSLKAASKFSRMFDDGNTRQEYVAICHG------------DPGFDSV----VDASLYRRSSGKTGAVARSQ----------AAEFGAKDAKTRVRNVATA-------------GGLSLCRADVTDGSMHQVRVHLQWKRCPVLGDKDY---GDAEANQRVSRRGSFRVDPGRPLVHSMSLEFTHPFTDKRMSFRAPMPSDMW 1487
V +ED NAPIDWLLSR+LP RSRRF+R+ L G+V++DGR KR VRV G TI++ + A P L+ L V+YED + VVAKP G V QP + GT+L+G+LHHMV + D AA+ L QGVV RLD+ TSG+++VAK+L+A+S S MF + Y+A+ G D G D +DA LY+R+SGK Q A+ K A TRV+ + + GGL + ++T G HQ+R HL PV+GD Y GDA A +R + + RPL+H++SL HP T+ R+ AP+P+DMW
Sbjct: 10 VEQEDGNAPIDWLLSRKLPHRSRRFFRKQLADGNVQIDGRVNKRLVRVRPGQTITVAAAAADAVAPPSEQLPAQDLK----------LHVVYEDEHIIVVAKPPGIVVQPMASQPRGTLLNGVLHHMVARGECAAGDEVAAQGLLQGVVHRLDRDTSGIVIVAKNLEASSTLSAMFKSRKVSKTYLAVTAGLPNPARCALEPADSGGDGTGPYTIDAPLYKRASGKMAVATPQQLQXXXXXXXXASAIDVKPALTRVKALPRSAAXXXXXXXXXXXGGLRALQVEITTGRQHQIRAHLLHAGAPVIGDVTYCAGGDAGA----ARAAAAALGVARPLLHALSLTLHHPVTNARLVLVAPLPADMW 360
BLAST of mRNA_F-serratus_M_contig736.18593.1 vs. uniprot
Match: A0A7S3XRN0_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRN0_HETAK) HSP 1 Score: 209 bits (531), Expect = 2.140e-57 Identity = 126/339 (37.17%), Postives = 189/339 (55.75%), Query Frame = 3
Query: 507 VVLEVRKEDHNAPIDWLLSRRLPIRSRRFYRRALEGGSVKVDGRTVKRFVRVSRGSTIS--IENVVSAAAGPRDRGSVPATLRSYLYPERLPGLRVLYEDPYCAVVAKPAGTVCQPCEAASSGTVLHGLLHHMVQNNQVEEEDLAAARSLSQGVVQRLDKTTSGVMVVAKSLKAASKFSRMFDDGNTRQEYVAICHGDPGFDSVVDASLYRRSSGKTGAVARSQ----AAEFGAKDAKTRVRNVATAGGLSLCRADVTDGSMHQVRVHLQWKRCPVLGDKDYGDAEANQRVSRRGSFRVDPGRPLVHSMSLEFTHPFTDKRMSFRAPMPSDMWHPAGVI 1505
V EV E++ AP+DW L+ P +SRR++R+ ++ G VKV+G+TV+RF ++ G + IE+ G + L VL+ED V KPAG VC P ++ SGTVL+GLLHH ++ Q + + +LS+G+V RLDK TSGVM+ AK+ KAA K S+ F+ T + Y+ +C+G +VV+ +YR +GK +++ Q +E KD+K+ V+ + GLSL ++ G MHQ R+HL++ P+LGD YG A N+ + VD R L+H+ L HP T +++ AP+PSDMW GVI
Sbjct: 58 VSAEVDSENNGAPLDWYLAHSFPQKSRRYFRKKIQDGEVKVNGKTVRRFAKLRTGQVLDLEIEDFAKEIEGAENLS-----------------LSVLFEDDDLVAVLKPAGVVCYPVDSQKSGTVLNGLLHHFLETEQ--QVFANSIETLSKGIVHRLDKDTSGVMIFAKNQKAAKKLSQSFESRETVKRYLGVCYGHVEPKTVVEEPVYRTKNGKMAVLSKKQDTSVISESRVKDSKSVVKCLMHRQGLSLVEVELITGRMHQARLHLKYLGAPILGDPIYGLARVNKDAYQ--DLGVD--RALLHASRLIVQHPRTGEKLDLSAPVPSDMW---GVI 370
BLAST of mRNA_F-serratus_M_contig736.18593.1 vs. uniprot
Match: A0A7S2USK5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USK5_9STRA) HSP 1 Score: 189 bits (481), Expect = 9.470e-50 Identity = 140/392 (35.71%), Postives = 196/392 (50.00%), Query Frame = 3
Query: 519 VRKEDHNAPIDWLLSRRLPIRSRRFYRRALEGGSVKVDGRTVKRFVRVSRGSTISIENVVSAAAGPRDRGSVPATLRSYLYPERLPGLRVLYEDPYCAVVAKPAGTVCQPCEAASSGTVLHGLLHHMV---------------QNNQ--VEEEDLAAARS----------------------------LSQGVVQRLDKTTSGVMVVAKSLKAASKFSRMFDDGNTRQEYVAICHGD--PGFDSVVDASLYRRSSGKTGAVARSQ----------------------AAEFGAKDAKTRVRNVATAGGLSLCRADVTDGSMHQVRVHL-QWKRCPVLGDKDYGDAEANQRVSRRGSFRVDPGRPLVHSMSLEFTHPFTDKRMSFRAPMPSDM 1484
V K+D + P+D +L+R+ P +SRRF+R+ ++ G VKVD + VKR ++ +G +VSA P ++ S+ PE L GL VL+ED + VAKP G + P E+ +GTVLHG+LH + + NQ +EED R L+QGVV RLD TSGV++VAK+ AA ++ F + +++Y+A+ GD PG + L R SSGK +Q A GA+ A T VR +AT G LS+ A++ G MHQ+RVHL Q CPVLGD YGD + N+R R + +V R L+H+ SLEFTHP T K +S P+P DM
Sbjct: 57 VGKKDDDWPLDIVLTRQYPEKSRRFFRKIIQAGRVKVDEKEVKRLSKIRKGQ------LVSAQFKPDEKPSME--------PEDL-GLEVLFEDEHLIAVAKPPGMIVHPVESCETGTVLHGVLHLLTTPREKVTPKETAAQPEGNQENAQEEDTKVERKPEKNAKKGGPDPWDPAKPLKLTARLCTGLAQGVVHRLDSDTSGVVLVAKNAPAARGMAKQFQQRSVKKKYMAVVVGDLGPGVHHLT-LPLLRTSSGKMAVFQEAQPEWGEEMAGGDMLTGDFTDVGEADAKGARGATTIVRRLATDGQLSVVGAEILTGRMHQLRVHLAQEANCPVLGDPVYGDTDWNRRAKRSENLQVS--RTLLHAHSLEFTHPITGKHVSLSTPVPLDM 430
BLAST of mRNA_F-serratus_M_contig736.18593.1 vs. uniprot
Match: A0A836CH15_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH15_9STRA) HSP 1 Score: 168 bits (426), Expect = 2.140e-42 Identity = 114/327 (34.86%), Postives = 171/327 (52.29%), Query Frame = 3
Query: 510 VLEVRKEDHNAPIDWLLSRRLPIRSRRFYRRALEGGSVKVDGRT-VKRFVRVSRGSTISIENVVSAAAGPRDRGSVPATLRSYLYPERLPGLRVLYEDPYCAVVAKPAGTVCQPCEAASSGTVLHGLLHHMVQNNQVEEEDLAAARSLSQGVVQRLDKTTSGVMVVAKSLKAASKFSRMFDDGNTRQEYVAICHGDPGFDSVVDASLYRRSSGKTGAVARSQAAEFG-AKDAKTRVRNVATAGGLSLCRADVTDGSMHQVRVHLQWKRCPVLGDKDYGDAEANQRVSRRGSFRVDPGRPLVHSMSLEFTHPFTDKRMSFRAPMPSDM 1484
V E D ID L ++P +SR ++ G V V+G + VK+ +V+ G IS+ + AT L PE +P L V++ED +AKP G V P +GT ++ LLHH+ ++ V L + L GVV RLDK TSGV++ AK+ + S++F D R+ Y+A+C G+PG D +D + R ++ + VA A+ A + VR A G LS+ + G HQ+RVHLQ +R P++GD+ YG+ + N+R+ +RG RPL+H++ LEFTHP T + AP+P DM
Sbjct: 55 VFEADLADAGQRIDAFLCSKVPDQSRTYFGDLCTKGCVCVNGSSAVKKSHKVTAGQIISVRFL--------------ATAELNLGPEDIP-LDVIFEDSELLAIAKPPGMVVHPAPGNWNGTFVNALLHHLSKDGSVVS--LGESGDLRPGVVHRLDKGTSGVLLAAKTPIMQKQLSQLFHDRKVRKTYLAVCAGNPG-DDAIDVPIGRHATNRQKMVAVPDIQPGARARRALSHVRCTAFDGSLSVAEVRIETGRTHQIRVHLQHRRTPIVGDELYGNRDWNRRLQKRGI-----SRPLLHALRLEFTHPTTGAALRLEAPLPEDM 358
BLAST of mRNA_F-serratus_M_contig736.18593.1 vs. uniprot
Match: A0A7S3XXK7_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXK7_HETAK) HSP 1 Score: 165 bits (417), Expect = 3.580e-41 Identity = 110/327 (33.64%), Postives = 168/327 (51.38%), Query Frame = 3
Query: 519 VRKEDHNAPIDWLLSRRLPIRSRRFYRRALEGGSVKVDGRTVKRFVRVSRGSTISIENVVSAAAGPRDRGSVPATLRSYLYPERLPGLRVLYEDPYCAVVAKPAGTVCQPCEAASSGTVLHGLLHHMVQNNQVEEEDLAAAR---SLSQGVVQRLDKTTSGVMVVAKSLKAASKFSRMFDDGNTRQEYVAICHGDPGFDSVVDASLYR--RSSGKTGAVARSQAAEFGAKDAKTRVRNVATAGGLSLCRADVTDGSMHQVRVHLQWKRCPVLGDKDYGDAEANQRVSRRGSFRVDPGRPLVHSMSLEFTHPFTDKRMSFRAPMPSDM 1484
V +E + +D LS P +SR ++ + G V+V GR VK+ ++ G +S+ + +A PE +P L +LYED + VAKP G V P + SGT + L HM ED AA +L G+V RLDK TSGV++ +K+ + +K S MF ++ Y+A+C G+PG D ++ + R ++ K + +Q A+ A T V ++ LSL R + G HQ+RVHL +R PVLGD+ YG+ + N+R +R + RPL+H+ LE HP T + +S +AP+P DM
Sbjct: 71 VGEEYNKKRLDAFLSDEFPEQSRSYFGSLCQQGLVRVGGRAVKKSEKLRAGQEVSVAFLPTAEMAAE--------------PEDIP-LDILYEDEHLIAVAKPPGMVVHPAPGSWSGTFANALAFHMRSRG----EDYRAAGGGDALRPGIVHRLDKGTSGVLLASKNSQCHAKLSEMFASRKIKKTYLAVCVGNPGQDVKIENLIARHPKNRQKMCVIHETQEGAARARTAVTLVDGLSFDSQLSLARVQIETGRTHQIRVHLAHRRTPVLGDELYGNGDQNRRAVKRFGLQ----RPLLHAYQLELDHPITGEPLSLKAPVPEDM 374
BLAST of mRNA_F-serratus_M_contig736.18593.1 vs. uniprot
Match: A0A6M1ZVU5_9BACT (Pseudouridine synthase n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M1ZVU5_9BACT) HSP 1 Score: 157 bits (398), Expect = 1.250e-39 Identity = 115/340 (33.82%), Postives = 173/340 (50.88%), Query Frame = 3
Query: 501 NSVVLEVRKEDHNAPIDWLLSRRLPIRSRRFYRRALEGGSVKVDGRTVKRFVRVSRGSTISIENVVSAAAGPRDRGSVPATLRSYLYPERLPGLRVLYEDPYCAVVAKPAGTVCQPCEAASSGTVLHGLLHHMVQNNQVEEEDLAAARSLSQGVVQRLDKTTSGVMVVAKSLKAASKFSRMFDDGNTRQEYVAICHGDPGFDSVVDASLYRRSSGKTGAVARSQAA---EFGAKDAKTRVRNVATAGGLSLCRADVTDGSMHQVRVHLQWKRCPVLGDKDYGDAEANQRVSRRGSFRVDPGRPLVHSMSLEFTHPFTDKRMSFRAPMPSDMWHPAGVILR 1511
NS V +E+ +D LL+ R P SR ++++ ++ V V+G+ VK+ + + I I+ V+S L PE +P L +LYED V+ KPAG V P SSGT+++GLL H Q L AA SL G+V RLDK TSG++V AK+ +A K S +F + +EY+AIC +PG + ++D + R V R + E G ++A+T ++ G LSL R G HQ+RVHL+ R P+LGD YG+ N++ L+H+ L F HP + +++ F+AP+P DM I+R
Sbjct: 2 NSKTHIVTEEEEKLRLDTLLATRFPELSRTYFQQLIDRQLVLVNGKQVKKRIHLRSADEIEIQFVLSPEIS--------------LEPEEIP-LDILYEDEELLVINKPAGLVVHPGAGHSSGTLVNGLLFHCKQ--------LKAAESLRPGIVHRLDKGTSGLLVAAKNEEAQMKLSTLFANRQVHKEYLAICISNPG-NRLIDQPIGRHP------VRRKEMTILKERG-REAQTETHSLVHNGELSLVRLIPKTGRTHQLRVHLKSIRAPILGDPVYGNHYLNKKYGLT--------HQLLHAEILRFVHPISGEKVEFKAPIPEDMQKIIDSIIR 302
BLAST of mRNA_F-serratus_M_contig736.18593.1 vs. uniprot
Match: A0A2V8G7E2_9BACT (Pseudouridine synthase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8G7E2_9BACT) HSP 1 Score: 156 bits (394), Expect = 7.190e-39 Identity = 115/340 (33.82%), Postives = 162/340 (47.65%), Query Frame = 3
Query: 513 LEVRKEDHNAPIDWLLSRRLPIRSRRFYRRALEGGSVKVDGRTVKRFVRVSRGSTISIENVVSAAAGPRDRGSVPATLRSYLYPERLPGLRVLYEDPYCAVVAKPAGTVCQPCEAASSGTVLHGLLHHMVQNNQVEEEDLAA-ARSLSQGVVQRLDKTTSGVMVVAKSLKAASKFSRMFDDGNTRQEYVAICHGDPGFDSVVDASLYRRSSGKTGAVARSQAAEFGAKDAKTRVRNVATAGGLSLCRADVTDGSMHQVRVHLQWKRCPVLGDKDYGDAEANQRVSRRGSFRVDPGRPLVHSMSLEFTHPFTDKRMSFRAPMPSDMWHPAGVILRASGTPE 1529
L V E +D L+ LP RSR +R ++ G V R ++ V G ++E AA P PE LP L VLYED V+ KPAG V P SGT+++ LLHH+ +DL+ L G+V RLD+ TSGVM+VAK +A + SR F D +EY+A+ G +DA++ R S + R++ A + A TR+ G+SL R + G HQ+RVHL P++GD YG R R++ RP +H+ L FTHP +RM+F +P+P+D+ IL A PE
Sbjct: 10 LRVEAEHDGVRLDNFLTALLPERSRSHIQRLIKDGLVSGPLRDLRPSSTVHAGQVFAVELPAPVAAAPE--------------PEALP-LTVLYEDSDVVVIDKPAGMVVHPGAGHRSGTLVNALLHHV--------DDLSGIGGELRPGIVHRLDRGTSGVMIVAKHDRAHQELSRQFQDREVEKEYIALVWGVVQAGRRIDAAIGRDPSNRQKMSTRARRA----RSAVTRITKAEHLKGVSLLRVAIATGRTHQIRVHLGAIGHPIVGDAVYGGVHRRVANDLRAVQRLE--RPFLHAARLSFTHPADGRRMTFESPLPADLDAVIDDILAAQAEPE 320
BLAST of mRNA_F-serratus_M_contig736.18593.1 vs. uniprot
Match: A0A2E8E8E4_9BACT (Pseudouridine synthase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2E8E8E4_9BACT) HSP 1 Score: 155 bits (392), Expect = 1.610e-38 Identity = 109/324 (33.64%), Postives = 158/324 (48.77%), Query Frame = 3
Query: 513 LEVRKEDHNAPIDWLLSRRLPIRSRRFYRRALEGGSVKVDGRTVKRFVRVSRGSTISIENVVSAAAGPRDRGSVPATLRSYLYPERLPGLRVLYEDPYCAVVAKPAGTVCQPCEAASSGTVLHGLLHHMVQNNQVEEEDLAAARSLSQGVVQRLDKTTSGVMVVAKSLKAASKFSRMFDDGNTRQEYVAICHGDPGFDSVVDASLYRRSSGKTGAVARSQAAEFGAKDAKTRVRNVATAGGLSLCRADVTDGSMHQVRVHLQWKRCPVLGDKDYGDAEANQRVSRRGSFRVDPGRPLVHSMSLEFTHPFTDKRMSFRAPMPSDM 1484
LEV E +D ++ LP RSR +R + GG+V+++ R+V+ V G I +E +PA S PE LP + ++++DP VV KPAG V P SGT+++ LLHH+ + + E G+V RLD+ TSGVM+VAK A ++ SR F D +EY+A+ G +DA L R + R++ A + A TRV GL+L + G HQ+RVHL PV+GD YG + R +D RP +HS + FTHP +R+ F AP+P D+
Sbjct: 18 LEVAGEHDGTRLDHYITEVLPDRSRSQIQRLIRGGNVRLNQRSVRASHAVHTGDVIDLE--------------IPAPAPSTPVPEALP-ITIVHDDPDLVVVDKPAGMVVHPAVGHESGTLVNALLHHVTGLSGIGGEQRP-------GIVHRLDRGTSGVMLVAKHDTAHAELSRQFADREVEKEYIALVWGLLNTGRRIDAPLGRDPVNRQKMSTRARRA----RSAVTRVTGTERLRGLTLATVAIATGRQHQIRVHLNSIGHPVVGDAVYGGVRRHLAADHRTLASLD--RPFLHSFRIAFTHPRDGRRVEFTAPLPEDL 313
BLAST of mRNA_F-serratus_M_contig736.18593.1 vs. uniprot
Match: A0A6M2A8C7_9BACT (Pseudouridine synthase n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M2A8C7_9BACT) HSP 1 Score: 153 bits (387), Expect = 4.140e-38 Identity = 107/325 (32.92%), Postives = 161/325 (49.54%), Query Frame = 3
Query: 510 VLEVRKEDHNAPIDWLLSRRLPIRSRRFYRRALEGGSVKVDGRTVKRFVRVSRGSTISIENVVSAAAGPRDRGSVPATLRSYLYPERLPGLRVLYEDPYCAVVAKPAGTVCQPCEAASSGTVLHGLLHHMVQNNQVEEEDLAAARSLSQGVVQRLDKTTSGVMVVAKSLKAASKFSRMFDDGNTRQEYVAICHGDPGFDSVVDASLYRRSSGKTGAVARSQAAEFGAKDAKTRVRNVATAGGLSLCRADVTDGSMHQVRVHLQWKRCPVLGDKDYGDAEANQRVSRRGSFRVDPGRPLVHSMSLEFTHPFTDKRMSFRAPMPSDM 1484
+L V KE +D LS R P SR++++ +E V V+G+ K+ ++ G I IE + T L PE +P L +LYED V KPAG V P +GT +H LL++ + L + +L G+V RLDK TSGV++ AK+ +A F + ++EY+AIC G+PG + +++ ++ R + + R E G K+A T ++ T LS R G HQ+RVHLQ P+LGD YG N++ R L+H+ SL+F HP T+K + +AP+P DM
Sbjct: 7 LLVVEKEGEGVRLDKFLSTRFPDYSRQYFQYLIETHLVLVNGQIAKKRTKLIEGDEIEIEFAL--------------TKEISLTPEPIP-LTILYEDEEMLAVNKPAGMVVHPAAGNWTGTFVHALLYYC--------QTLPSQETLRPGIVHRLDKETSGVLLAAKTERAQQGLVEAFANQKVKKEYLAICVGNPG-NRLIEGNIGRHPTKRKQMSLR----EEGGKEASTECLSLGTYENLSFVRLFPKTGRTHQLRVHLQSVGTPILGDSVYGIPSQNKKWGSE--------RQLLHAASLQFPHPITEKSIEVKAPIPDDM 295 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig736.18593.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig736.18593.1 >prot_F-serratus_M_contig736.18593.1 ID=prot_F-serratus_M_contig736.18593.1|Name=mRNA_F-serratus_M_contig736.18593.1|organism=Fucus serratus male|type=polypeptide|length=555bp MPPKSREGVSYFARRYRRNTTSRPIILSRVCAIIHSFCVLQTTGLALVSPback to top mRNA from alignment at F-serratus_M_contig736:145631..149354+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig736.18593.1 ID=mRNA_F-serratus_M_contig736.18593.1|Name=mRNA_F-serratus_M_contig736.18593.1|organism=Fucus serratus male|type=mRNA|length=3724bp|location=Sequence derived from alignment at F-serratus_M_contig736:145631..149354+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig736:145631..149354+ >mRNA_F-serratus_M_contig736.18593.1 ID=mRNA_F-serratus_M_contig736.18593.1|Name=mRNA_F-serratus_M_contig736.18593.1|organism=Fucus serratus male|type=CDS|length=3330bp|location=Sequence derived from alignment at F-serratus_M_contig736:145631..149354+ (Fucus serratus male)back to top |