mRNA_F-serratus_M_contig710.18317.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig710.18317.1
Unique NamemRNA_F-serratus_M_contig710.18317.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig710.18317.1 vs. uniprot
Match: D8LGT9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGT9_ECTSI)

HSP 1 Score: 392 bits (1007), Expect = 3.860e-131
Identity = 213/328 (64.94%), Postives = 245/328 (74.70%), Query Frame = 1
Query:   43 DLDLKSIDIVAFSSRMIAAARAIESRREDRLFNDPFAELLAGPEAMRKVVDR-QTQTTNPPRSDADRDRSVESVDGTAEREKGPSSSSRRLAIRTRFCDDFFEDCAWARGIKQIVSLGAGMDTRGLRLQAPKDATVFDVDQAQVIRVKKGLLMKARA-DGMSL------EGRGEGASRARVVAVEADLSHIGWEGELFEAGFDPALPSAWILEGLTMYLEEKELVRLIEILAGLCTPGSAFCATCVSSGSVARGK-SGSQLMSTWKWGSDDPQSFFDARFPAGWSFKGVTCGTPGQFPTGADYSVGFQGKGPAYVIGYLSGKGSSSSQ 999
            +LDL S D VA+SSRMIAAARA+ESRR DRLF+DP+AELLAGP+AM+ V D+ Q +++ PP        +  + DG       P    RRLAIRTRFCDDFFEDCA  RGIKQIVSLGAGMDTRGLRL+A  D  VF+VDQA V+RVK  LL +A A D ++       E R  G  + RVV VEADLS  GW+GELFEAGFDP+LPSAWILEGLTMYLEEKELV L+ +LA L +PGSAFCATCVS+ SV R + S S LM  WKWGSD+PQ+FF+A FP GWSF GVTCGTPG+FP GADY VGF GK PAYVIGY S   SSSS+
Sbjct:   71 NLDLTSSDTVAYSSRMIAAARALESRRRDRLFDDPYAELLAGPDAMQTVEDKAQEESSLPPLEATAAATAAAASDGV------PRDVQRRLAIRTRFCDDFFEDCAGPRGIKQIVSLGAGMDTRGLRLRASGDTKVFEVDQALVLRVKGALLTQAAAADEVAAALAGFRERRDGGVGQGRVVPVEADLSVEGWQGELFEAGFDPSLPSAWILEGLTMYLEEKELVALLRVLASLSSPGSAFCATCVSAESVERAQNSASPLMGRWKWGSDNPQAFFEANFPEGWSFNGVTCGTPGEFPQGADYGVGFVGKAPAYVIGYFSSSSSSSSR 392          
BLAST of mRNA_F-serratus_M_contig710.18317.1 vs. uniprot
Match: D7FXP3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXP3_ECTSI)

HSP 1 Score: 288 bits (736), Expect = 2.020e-91
Identity = 165/285 (57.89%), Postives = 189/285 (66.32%), Query Frame = 1
Query:  160 LAGPEAMRKVVDR-----QTQTTNPPRSDADRDRSVESVDGTAEREKGPSSSSRRLAIRTRFCDDFFEDCAWARGIKQIVSLGAGMDTRGLRLQAPKDATVFDVDQAQVIRVKKGLLMKARA-DGMSL------EGRGEGASRARVVAVEADLSHIGWEGELFEAGFDPALPSAWILEGLTMYLEEKELVRLIEILAGLCTPGSAFCATCVSSGSVARGK-SGSQLMSTWKWGSDDPQSFFDARFPAGWSFKGVTCGTPGQFPTGADYSVGFQGKGPAYVIGYLS 975
            LAGP+ ++ V DR     Q + + PP        +  + DG       P     RLAIRTRFCDDFFEDCA  RGIKQIVSLGAGMDTRGLR +A  D  VF+VDQA V+RVK  LL +A A D ++       E R  G  + RVV V+A LS  GW+GELFEAG DP+LPSAWILEGL MYLEEKELV L+ +LA L +PGSAFCAT VS+ SV R   S S  M  WK GSD P +FF+A  P GWSF GVTCGTPG+FP GADY V F GK  AYVIGY S
Sbjct:   11 LAGPDPIQTVEDREKVKAQEELSAPPLEATTAATAAAASDGV------PRDVQTRLAIRTRFCDDFFEDCAGPRGIKQIVSLGAGMDTRGLRRRASGDTKVFEVDQALVLRVKSALLTQAAAADEVAAALAGFRERRDGGVGQGRVVPVQAALSVEGWQGELFEAGSDPSLPSAWILEGLNMYLEEKELVALLRVLASLSSPGSAFCATYVSAESVERTHISASPPMGRWKRGSDKPPAFFEANSPQGWSFNGVTCGTPGEFPEGADYGVDFVGKAAAYVIGYFS 289          
BLAST of mRNA_F-serratus_M_contig710.18317.1 vs. uniprot
Match: A0A2N3VS80_9ACTN (S-adenosyl-L-methionine-dependent methyltransferase n=4 Tax=Streptomyces TaxID=1883 RepID=A0A2N3VS80_9ACTN)

HSP 1 Score: 135 bits (340), Expect = 9.170e-33
Identity = 100/301 (33.22%), Postives = 157/301 (52.16%), Query Frame = 1
Query:   25 PSAGADDLDLKSIDIVAFSSRMIAAARAIESRREDRLFNDPFAELLAG---PEAMRKVVDRQTQTTNPPRSDADRDRSVESVDGTAEREKGPSSSSRRLAIRTRFCDDFFEDCAWARGIKQIVSLGAGMDTRGLRLQAPKDATVFDVDQAQVIRVKKGLLMKARADGMSLEGRGEGASRARVVAVEADLSHIGWEGELFEAGFDPALPSAWILEGLTMYLEEKELVRLIEILAGLCTPGSAFCATCVSSGSVARGKSGSQLM------STWKWGSDDPQSFFDARFPAGWSFKGVTCGTPG 900
            P+ G ++   + +D V  ++ + AA RA E+RR DR++ DP+A+ L G   PE + ++     Q T P    AD  R++            PS+     AIRTRF DD+ ++ A   G++QIV   AGMD+R  RL  P+    ++VD+  V+  KK      R +G+S        +  R VAV  DL+   WE +L  AG+DPALPS W+LEGL  Y+ E++  R++  +A    PGS   A  V++ ++   +    L         W +G+D+P++ FD+    G+S + +  G PG
Sbjct:   31 PTEGDENPVTELLDAVERTALLTAALRAAETRRPDRIYQDPYADALCGETGPELLAEI----RQATFP----ADASRTL------------PSTPDYN-AIRTRFFDDYLQEAAREPGMRQIVLAPAGMDSRAYRLDWPEGLRYYEVDRPAVLAYKKD-----RLEGVSPR------TDHRTVAV--DLTSPDWEDDLLAAGYDPALPSTWLLEGLLYYIPEQDTHRILRRVADFSAPGSRIAADLVNAAALTLPQMRGLLEIFAGWGCPWLFGTDEPEALFDS---FGFSVEALQPGEPG 294          
BLAST of mRNA_F-serratus_M_contig710.18317.1 vs. uniprot
Match: UPI001F049D51 (SAM-dependent methyltransferase n=1 Tax=Streptomyces sp. MUM 178J TaxID=2791991 RepID=UPI001F049D51)

HSP 1 Score: 134 bits (336), Expect = 1.870e-32
Identity = 97/275 (35.27%), Postives = 137/275 (49.82%), Query Frame = 1
Query:   61 IDIVAFSSRMIAAARAIESRREDRLFNDPFAELLAG---PEAMRKVVDRQTQTTNPPRSDADRDRSVESVDGTAEREKGPSSSSRRL---AIRTRFCDDFFEDCAWARGIKQIVSLGAGMDTRGLRLQAPKDATVFDVDQAQVIRVKKGLLMKARADGMSLEGRGEGASRARVVAVEADLSHIGWEGELFEAGFDPALPSAWILEGLTMYLEEKELVRLIEILAGLCTPGSAFCATCVSSGSVARGKSGSQLM------STWKWGSDDPQSFFDA 849
            +D V  +S + AA RA E+RR DRL+ DP+AE L G   P  + ++ D    +   P   A          G  +R  G     R L   AIRTR+ DD       AR + QIVS  +GMD R  RL  P     F++D+A V+  K+  L  A               RA   AV ADL+   WE  L +AG+DPALPSAW+LEG+  YL E+ + RL++ +  +  PGS   A  V++  +   ++  QL         W++G+DDP++ F A
Sbjct:    5 LDAVGRTSLLTAAMRAEETRRPDRLYTDPYAETLCGDLGPALLAELQDGTHGSAPAPVPAA----------GAGDR-NGRHPMPRPLDVNAIRTRYFDDRL--LLAARDVPQIVSAASGMDARAYRLHWPPGLRYFEIDRAAVLAYKRDRLADA-------------VPRAEHRAVAADLTSPDWEARLVDAGYDPALPSAWLLEGMLYYLPEEAVCRLLDRIRRITAPGSVLAADLVNAAGLTLPQARGQLDVFARWGCPWQYGADDPEALFAA 253          
BLAST of mRNA_F-serratus_M_contig710.18317.1 vs. uniprot
Match: A0A7K2JLH7_9ACTN (S-adenosyl-L-methionine-dependent methyltransferase n=2 Tax=unclassified Streptomyces TaxID=2593676 RepID=A0A7K2JLH7_9ACTN)

HSP 1 Score: 133 bits (335), Expect = 2.160e-32
Identity = 99/286 (34.62%), Postives = 141/286 (49.30%), Query Frame = 1
Query:   61 IDIVAFSSRMIAAARAIESRREDRLFNDPFAELLAGPEAMRKVVDRQTQTTNPPRSDADRDRSVESVDGTAEREKGPSSSSRRLAIRTRFCDDFFEDCAWARGIKQIVSLGAGMDTRGLRLQAPKDATVFDVDQAQVIRVKKGLLMKARADGMSLEGRGEGASRARVVAVEADLSHIGWEGELFEAGFDPALPSAWILEGLTMYLEEKELVRLIEILAGLCTPGSAFCATCVSSGSVARGKSGSQLM------STWKWGSDDPQSFFDARFPAGWSFKGVTCGTPG 900
            +D V  ++ + AA RA ESRREDRL+ DP+A  L G +A  ++++     T PP    DR RSV            PS+     AIRTRF DD  ++    R + Q+V   AGMD+R  RL  P+    F+VD+  V+  K+      R  G+          R   V V  DL+   WE  L  +G+DP  PS W+LEGL  Y+ EK+  R++E +A  C PGS   A  V+  ++        L         W +GSD+P++ F+ R+  G+    V  G PG
Sbjct:    8 VDPVEKTALLTAALRAAESRREDRLYTDPYAATLVG-DAGPRLLEEVRAATFPP----DRPRSV------------PSTPDYN-AIRTRFFDDLLQEAVQDRAMTQLVVAPAGMDSRAYRLPWPRHLRYFEVDRQPVLTFKE-----ERLRGVD--------PRVDHVTVAVDLTADDWEDRLRASGYDPGTPSTWLLEGLLYYIPEKDTERMLERVAAFCAPGSRIAADLVNRAALTLPHMRPLLDVFRGWGCPWLFGSDEPEALFE-RY--GFDVAAVQPGEPG 259          
BLAST of mRNA_F-serratus_M_contig710.18317.1 vs. uniprot
Match: A0A4Q9J1I0_9CYAN (S-adenosyl-L-methionine-dependent methyltransferase n=2 Tax=Westiellopsis TaxID=221285 RepID=A0A4Q9J1I0_9CYAN)

HSP 1 Score: 132 bits (332), Expect = 3.880e-32
Identity = 83/258 (32.17%), Postives = 133/258 (51.55%), Query Frame = 1
Query:   64 DIVAFSSRMIAAARAIESRREDRLFNDPFAELLAGPEAMRKVVDRQTQTTNPPRSDADRDRSVESVDGTAEREKGPSSSSRRLAIRTRFCDDFFEDCAWARGIKQIVSLGAGMDTRGLRLQAPKDATVFDVDQAQVIRVKKGLLMKARADGMSLEGRGEGASRARVVAVEADLSHIGWEGELFEAGFDPALPSAWILEGLTMYLEEKELVRLIEILAGLCTPGSAFCATCVSSGSVARGKSGSQLMSTWKWGSDDPQS 837
            D+V+ SSRM+AA RAIE++R D LF DP A +LAG + + ++     Q  +                            +  +A+RTRF DDF    +    I+Q+V LGAGMDTR  RL   +D  ++++D+ +V++ K+ +L             G   SR    ++E D+    W  +L  +G+ P +PS W++EG   YL E ++  L++ +  L  PGS F A  ++S  V+  KS  +L   WK+G D+P++
Sbjct:    3 DLVSLSSRMMAAVRAIETQRPDGLFKDPLAAILAGDDIIAEIAPSAQQYED--------------------------QGTPVVAVRTRFFDDFL--MSQVDQIRQVVILGAGMDTRAFRLPWQRDTHLYELDRKEVLQYKESVL-------------GNIQSRCTRHSIEVDIKE-SWADKLIGSGYLPEIPSVWVMEGFVYYLSETQVHELLKTITKLSAPGSWFLADLINSFFVS--KSTDELSKHWKYGCDEPEN 216          
BLAST of mRNA_F-serratus_M_contig710.18317.1 vs. uniprot
Match: A0A646KSM1_STRJU (S-adenosyl-L-methionine-dependent methyltransferase n=2 Tax=Streptomyces TaxID=1883 RepID=A0A646KSM1_STRJU)

HSP 1 Score: 132 bits (332), Expect = 5.420e-32
Identity = 97/278 (34.89%), Postives = 140/278 (50.36%), Query Frame = 1
Query:   88 MIAAARAIESRREDRLFNDPFAELLAGPEAMRKVVDRQTQTTNPPRSDADRDRSVESVDGTAEREKGPSSSSRRLAIRTRFCDDFFEDCAWARGIKQIVSLGAGMDTRGLRLQAPKDATVFDVDQAQVIRVKKGLLMKARADGMSLEGRGEGASRARVVAVEADLSHIGWEGELFEAGFDPALPSAWILEGLTMYLEEKELVRLIEILAGLCTPGSAFCATCVSSGSVARGKSGSQLMST-------WKWGSDDPQSFFDARFPAGWSFKGVTCGTPG 900
            + AA RA E+RREDR++ DP+A  LAG +A  +++      T P    A R R+V            P +     AIRTRF DDF  D A   G+ QIV   AGMD+R  R++ P     F++D+  V+  K       R  G++         R     V  DL+   WE  L +AG+DP LPS W+LEGL  YL E +  RL+E +A +  PGS   A  V+S ++    S  +L+         W++GSD+P++ F+     G++ + V  G PG
Sbjct:   14 LTAALRAAETRREDRIYTDPYAARLAG-DAGPELLAEVRAATFP----AGRRRTV------------PDTPDFN-AIRTRFFDDFLHDAAREPGMTQIVIAPAGMDSRAYRMEWPGHIRFFEIDRTDVVEFKA-----ERLHGVT--------PRVAHRTVAVDLTDADWETRLTDAGYDPELPSTWLLEGLLYYLPEGDARRLLERVAAIAAPGSRIAADLVNSAALTL-PSMRELLEVFAGWGCPWQFGSDEPEALFER---CGFAVEAVQPGEPG 256          
BLAST of mRNA_F-serratus_M_contig710.18317.1 vs. uniprot
Match: A0A6H5KGH3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGH3_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 9.600e-32
Identity = 60/83 (72.29%), Postives = 67/83 (80.72%), Query Frame = 1
Query:  730 GSAFCATCVSSGSVARGKSG-SQLMSTWKWGSDDPQSFFDARFPAGWSFKGVTCGTPGQFPTGADYSVGFQGKGPAYVIGYLS 975
            GSAFCATCVS+ SV R ++  S LM  WKWGSD+PQ+FF+A FP GWSF GVTCGTPG+FP GADY VGF GK PAYVIGY S
Sbjct:   74 GSAFCATCVSAESVERAQNNASPLMGRWKWGSDNPQAFFEANFPEGWSFNGVTCGTPGEFPEGADYGVGFVGKAPAYVIGYFS 156          
BLAST of mRNA_F-serratus_M_contig710.18317.1 vs. uniprot
Match: A0A7S3UT70_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UT70_HETAK)

HSP 1 Score: 132 bits (333), Expect = 2.660e-31
Identity = 114/346 (32.95%), Postives = 167/346 (48.27%), Query Frame = 1
Query:   55 KSIDIVAFSSRMIAAARAIESRREDRLFNDPFAELLAGPEAMRKVVDRQTQTTNPPRSDADRDRSVESVDGTAEREKGPSSSSRRLAIRTRFCDDFFEDCAWARGIKQIVSLGAGMDTRGLRL--------QAPK-------------------DATV-------FDVDQAQVIRVKKGLLMKARADGMSLEGRGEGASRARVVAVEADLSHIGWEGELFEAGFDPALPSAWILEGLTMYLEEKELVRLIEILAGLCTPGSAFCATCVSSGSVARGKSGSQ--LMSTWKWGSD---DPQSFFDARFPAGWSFKGVTCGTPGQFPTGADYSVGFQGKGPAYVIGYLS 975
            +S D VAFSS+ +AAARAIE++R DRLF D  ++ LAG +A+ +V  ++ +T                       EKG    +R ++IRT++ DDF E  +   GI+QIV +GAGMDTR  RL        Q PK                   D+ V       ++VDQ +V+  K+ L M      + L+ R +        +V  DL++  ++  L E+GFDP +PS WILEGL+MYL E + + L+E +A LC   ++F      +         SQ  LM  W +G+D   D  S  ++  P       V  G PG +PTGA Y    +   PA   G ++
Sbjct:   54 ESADPVAFSSQRMAAARAIENKRRDRLFEDKVSQYLAG-QAL-EVAKQKMKT-----------------------EKG-YPRTRNISIRTKYFDDFLEHVSVEHGIEQIVLVGAGMDTRAFRLALAPQLKEQTPKRYDWLWRRGKNRRQLTAGEDSIVSVPSRCFYEVDQEKVLEEKEKL-MALLPRKLKLKHRRK--------SVYFDLTNGNFKKMLLESGFDPTMPSVWILEGLSMYLSEAQNIALLEQIASLCLHSASFVGLSFVNTKAVENAQNSQSPLMQQWVFGTDSLGDLLSKLESP-PKFHIISTVNLGDPGGYPTGASYHAYARRPNPAGTGGQVT 363          
BLAST of mRNA_F-serratus_M_contig710.18317.1 vs. uniprot
Match: A0A5J6HQN4_STRAD (S-adenosyl-L-methionine-dependent methyltransferase n=2 Tax=Streptomyces TaxID=1883 RepID=A0A5J6HQN4_STRAD)

HSP 1 Score: 130 bits (327), Expect = 2.820e-31
Identity = 96/277 (34.66%), Postives = 136/277 (49.10%), Query Frame = 1
Query:   88 MIAAARAIESRREDRLFNDPFAELLAGPEAMRKVVDRQTQTTNPPRSDADRDRSVESVDGTAEREKGPSSSSRRLAIRTRFCDDFFEDCAWARGIKQIVSLGAGMDTRGLRLQAPKDATVFDVDQAQVIRVKKGLLMKARADGMSLEGRGEGASRARVVAVEADLSHIGWEGELFEAGFDPALPSAWILEGLTMYLEEKELVRLIEILAGLCTPGSAFCATCVSSGSVARGKSGSQLM------STWKWGSDDPQSFFDARFPAGWSFKGVTCGTPG 900
            + AA RA E+ REDRL+ DP+A  LAG    + + +  T T  P     DR RS+            PS+     AIRTRF DDF    A  R + QIV   +GMD+R  R+  P     F+VD+  V+  K G     R  G+        A R     V  DL+   WE +L +AG+DP LPS W+LEGL  Y+ E +  R++E +A +  PGS   A  V++ +++       L         W +G+D+P+  FD R+  G+S +    G PG
Sbjct:   14 LTAALRAAETLREDRLYEDPYAARLAGEAGPQLLAEVHTATFPP-----DRPRSL------------PSTPDYN-AIRTRFFDDFLVGAAQDRQMSQIVLAPSGMDSRAYRISWPDHIRYFEVDRPAVLDFKSG-----RLQGV--------APRVAHRTVAVDLTADDWESQLIDAGYDPTLPSTWLLEGLLYYIPEPDTHRMLERVAAITAPGSRIAADVVNAAALSLPHMRGLLDVFANWGCPWLFGTDEPEDLFD-RY--GFSVEAKQPGEPG 256          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig710.18317.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGT9_ECTSI3.860e-13164.94Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FXP3_ECTSI2.020e-9157.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2N3VS80_9ACTN9.170e-3333.22S-adenosyl-L-methionine-dependent methyltransferas... [more]
UPI001F049D511.870e-3235.27SAM-dependent methyltransferase n=1 Tax=Streptomyc... [more]
A0A7K2JLH7_9ACTN2.160e-3234.62S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A4Q9J1I0_9CYAN3.880e-3232.17S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A646KSM1_STRJU5.420e-3234.89S-adenosyl-L-methionine-dependent methyltransferas... [more]
A0A6H5KGH3_9PHAE9.600e-3272.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3UT70_HETAK2.660e-3132.95Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A5J6HQN4_STRAD2.820e-3134.66S-adenosyl-L-methionine-dependent methyltransferas... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig710contigF-serratus_M_contig710:216927..219929 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score374.0
Seed ortholog evalue6.7e-101
Seed eggNOG ortholog2880.D8LGT9
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Leucine carboxyl methyltransferase
EggNOG OGs2QRNU@2759,COG3315@1
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size1261
Cds size927
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932185.8191805-UTR-F-serratus_M_contig710:216926..2171731622932185.8191805-UTR-F-serratus_M_contig710:216926..217173Fucus serratus maleUTRF-serratus_M_contig710 216927..217173 -
1690964189.2661328-UTR-F-serratus_M_contig710:216926..2171731690964189.2661328-UTR-F-serratus_M_contig710:216926..217173Fucus serratus maleUTRF-serratus_M_contig710 216927..217173 -
1622932185.9709911-UTR-F-serratus_M_contig710:219842..2199291622932185.9709911-UTR-F-serratus_M_contig710:219842..219929Fucus serratus maleUTRF-serratus_M_contig710 219843..219929 -
1690964189.3527079-UTR-F-serratus_M_contig710:219842..2199291690964189.3527079-UTR-F-serratus_M_contig710:219842..219929Fucus serratus maleUTRF-serratus_M_contig710 219843..219929 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932185.8387978-CDS-F-serratus_M_contig710:217173..2173401622932185.8387978-CDS-F-serratus_M_contig710:217173..217340Fucus serratus maleCDSF-serratus_M_contig710 217174..217340 -
1690964189.2806704-CDS-F-serratus_M_contig710:217173..2173401690964189.2806704-CDS-F-serratus_M_contig710:217173..217340Fucus serratus maleCDSF-serratus_M_contig710 217174..217340 -
1622932185.855745-CDS-F-serratus_M_contig710:217611..2177241622932185.855745-CDS-F-serratus_M_contig710:217611..217724Fucus serratus maleCDSF-serratus_M_contig710 217612..217724 -
1690964189.2904396-CDS-F-serratus_M_contig710:217611..2177241690964189.2904396-CDS-F-serratus_M_contig710:217611..217724Fucus serratus maleCDSF-serratus_M_contig710 217612..217724 -
1622932185.8745701-CDS-F-serratus_M_contig710:217964..2180301622932185.8745701-CDS-F-serratus_M_contig710:217964..218030Fucus serratus maleCDSF-serratus_M_contig710 217965..218030 -
1690964189.299104-CDS-F-serratus_M_contig710:217964..2180301690964189.299104-CDS-F-serratus_M_contig710:217964..218030Fucus serratus maleCDSF-serratus_M_contig710 217965..218030 -
1622932185.8921127-CDS-F-serratus_M_contig710:218370..2185941622932185.8921127-CDS-F-serratus_M_contig710:218370..218594Fucus serratus maleCDSF-serratus_M_contig710 218371..218594 -
1690964189.307434-CDS-F-serratus_M_contig710:218370..2185941690964189.307434-CDS-F-serratus_M_contig710:218370..218594Fucus serratus maleCDSF-serratus_M_contig710 218371..218594 -
1622932185.911631-CDS-F-serratus_M_contig710:218789..2188551622932185.911631-CDS-F-serratus_M_contig710:218789..218855Fucus serratus maleCDSF-serratus_M_contig710 218790..218855 -
1690964189.3159332-CDS-F-serratus_M_contig710:218789..2188551690964189.3159332-CDS-F-serratus_M_contig710:218789..218855Fucus serratus maleCDSF-serratus_M_contig710 218790..218855 -
1622932185.9313505-CDS-F-serratus_M_contig710:219067..2192831622932185.9313505-CDS-F-serratus_M_contig710:219067..219283Fucus serratus maleCDSF-serratus_M_contig710 219068..219283 -
1690964189.324339-CDS-F-serratus_M_contig710:219067..2192831690964189.324339-CDS-F-serratus_M_contig710:219067..219283Fucus serratus maleCDSF-serratus_M_contig710 219068..219283 -
1622932185.9515815-CDS-F-serratus_M_contig710:219767..2198421622932185.9515815-CDS-F-serratus_M_contig710:219767..219842Fucus serratus maleCDSF-serratus_M_contig710 219768..219842 -
1690964189.341204-CDS-F-serratus_M_contig710:219767..2198421690964189.341204-CDS-F-serratus_M_contig710:219767..219842Fucus serratus maleCDSF-serratus_M_contig710 219768..219842 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig710.18317.1prot_F-serratus_M_contig710.18317.1Fucus serratus malepolypeptideF-serratus_M_contig710 217174..219842 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig710.18317.1

>prot_F-serratus_M_contig710.18317.1 ID=prot_F-serratus_M_contig710.18317.1|Name=mRNA_F-serratus_M_contig710.18317.1|organism=Fucus serratus male|type=polypeptide|length=309bp
MIAAARAIESRREDRLFNDPFAELLAGPEAMRKVVDRQTQTTNPPRSDAD
RDRSVESVDGTAEREKGPSSSSRRLAIRTRFCDDFFEDCAWARGIKQIVS
LGAGMDTRGLRLQAPKDATVFDVDQAQVIRVKKGLLMKARADGMSLEGRG
EGASRARVVAVEADLSHIGWEGELFEAGFDPALPSAWILEGLTMYLEEKE
LVRLIEILAGLCTPGSAFCATCVSSGSVARGKSGSQLMSTWKWGSDDPQS
FFDARFPAGWSFKGVTCGTPGQFPTGADYSVGFQGKGPAYVIGYLSGKGS
SSSQLYEL*
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mRNA from alignment at F-serratus_M_contig710:216927..219929-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig710.18317.1 ID=mRNA_F-serratus_M_contig710.18317.1|Name=mRNA_F-serratus_M_contig710.18317.1|organism=Fucus serratus male|type=mRNA|length=3003bp|location=Sequence derived from alignment at F-serratus_M_contig710:216927..219929- (Fucus serratus male)
GCTCCATCCACAGGGCAAGAAGAACCATCCGCCGGAGCGGATGACCTTGA TCTGAAAAGCATCGACATAGTAGCCTTCTCTTCTCGCATGATTGCGGCGG CGCGGGCGATTGAGTCTCGGAGAGAAGACCGCTTGTTCAACGACCCCTTC GCGGAGTTGCTGGTGAGGCGTACGCTCGCGCTTTATTTTAGGTAGCAAAG CGCTATAGTCAGAAGGGCAGAGATCAGAACGGTGGCTGCAAATCTGTGCT GCTGTCCACCATTCCGCTTTACGTCAAATTACCCTATCTTAAAGTTTAGG TCAATACGAAGACGTCACGGTTTGTTGCCACCTGCCGTATATTTGATGTT CCACGTTACCACCACTTGTTGGGTTCTGACGAGAGTTGGGTCGTTGCCGC TCAGTGGCACTTCATCTAAACACGCGCGGCATCTCAAAGCGCCTTGTACC TAACGTTTTCGTGGAAGATCCTTGAATCTCTGCAGCGTGATCAACCGTCT AAGGGTGCGTCCGAGAGATGACGCAGTTGGTCAACGCAAAAGTGTAAAAG GACTGTCATTGCACGCGCAGCCCATTATACTTCAAGTTCAGTTTTCGGTG TGTTTGTCAGCGACCAAACGTTATTCGTCCGGTCACAACGGCGCAGGCGG GACCCGAGGCCATGCGGAAAGTCGTCGACCGGCAAACGCAGACTACAAAC CCCCCAAGGTCTGATGCAGACCGCGATCGCTCCGTTGAATCAGTCGACGG GACAGCAGAGCGTGAGAAGGGCCCCAGCTCATCGTCGAGAAGACTGGCGA TTCGCACGCGGTTCTGCGACGACTTCTTTGAAGACTGCGCCTGGGCGAGG GGTATCAAGCAGGTGCATTCAGCAGGCGAAATGTATTACCCGGTAGATGA GCGTGGGTCGAACCTCTGTCCGAGTCACCGGTCGAAATGTGCGTTTTCTT AAGACTTGATTTTTTTGCTTGAAAGCGCGGTTAATCGAGAGCCGTGCGTC GGTTAGAAAGGGAATCGTCGTGGTTAACGCTTCCCTTATGTGCGTACGCC TGTCGCCCGTGGCACCTTGTACAGATTGTGTCTCTTGGAGCCGGTATGGA CACGCGGGGGCTCCGACTTCAGGCTCCCAAAGACGCAACCGTGAGTGGTT TTGTTAGCAGTCGAATCCTTTAACAACATTGCGAACGAAGGTAACTTAAG GGAGATATCCACAGCGTCATGATCATACGTGCCTTAACTTGATATGCCGT ACATGGACTGAATCCTCGTGTGGGTGAATGGTTTGCTTCTAACCTACATG AGCGATGCTTCTCATTTGCTTCCGCACGGAAGTAGGTTTTCGACGTAGAT CAGGCGCAAGTAATACGAGTGAAGAAAGGGCTTCTGATGAAAGCTAGAGC TGACGGAATGAGCTTGGAGGGAAGGGGAGAAGGCGCCTCAAGAGCACGGG TTGTAGCAGTCGAAGCGGATCTAAGTCATATAGGGTGGGAAGGCGAGCTT TTTGAGGCCGGTTTTGACCCGGCACTGCCCAGCGCTTGGATTCTTGAAGG GCTGACAATGTGAGAAAATGTGTACGAGCTTTGCGTTTTTATCGCTCGAC GATGGGCCATGCTGAGCCTGGAAGTATCGCATGCCACGTGTGCTCATAAC GTATTTGCTTTGAACACCACACCTCGGTTTACTTCGCAGGTGCCTGTGAA CAGAAACGCCGGACTATCCCCTTGCCAAACCTACGACCGGGCTGCGATTC CCTTGAACCGTGCAGCCCTGCAACTTCCCCAGACTCTCTGCTATAATATA TTATCTTGGCAGAAGTCAATGTAACGGAAGGGTGCGACAGAAAGGCTTTT GACATGTCAAAACTACACCGGCGATACCCCCCTTGTCTTTCTGCTGCAGG TACCTAGAAGAGAAAGAGCTCGTGCGTCTGATTGAGATTCTGGCCGGTCT TTGCACTCCGGGGAGGTGGGCATTTTCGGTCTTCCCAACTTTTGTCGCTG AACCTTGGATGGACTCAAAGCCCCCGGCGCGAGTTACATTTGCATCGCCC ACTTGCTTCACGCTACAAGCGATTGATACGCTGCAAATTGTTGCCGCAAC CAGAACCACAATATTATATTCCACGATCTTCACCGATCGATGTTTCGCTC TCGCTGGGCAGGCAGTCAAACAAGTAAAGTCTCGTTCGAATATTTTTGTT TGCAGTGCCTTCTGCGCTACCTGTGTTTCGTCGGGATCGGTGGCGCGAGG AAAGAGCGGTAGCCAGCTTATGAGCACATGGAAGTGGGGCAGCGATGACC CGCAGTCATTCTTCGACGGTGAGTGGTGCATTTGCGCGGACGCTTCATAG AGAGACACTAACCCTCGCTGGCTAATGTTGCACGCTATAGGCCATCCCGC TGATCTGCCCCCCGTTAGTCGCGCAAAACGTTGTGACTGTTTTTCTCTAT AGACCGAAGCCGTCACGTCATCCTTCACCGCCGCAGGGCAATCGCGAGTG TCGTGCTTGATGCCACTAGGTTCTGTGCGGGCCACCGAAAATCTTAACGT CACCCGTCGTTTGCCGGCCGTTGTTTCCCGGTGCGCTAGCTCGCTTTCCT GCGGGGTGGTCTTTCAAGGGTGTTACGTGCGGCACACCAGGACAGTTTCC GACGGGGGCAGACTACTCTGTGGGGTTCCAGGGCAAAGGTCCCGCGTACG TGATCGGTTATTTGTCCGGAAAGGGGTCGTCATCGTCACAATTGTATGAG TTGTGACCGATACAGAATGGTTCCAGCATCAGGAATCTTGCCGGAGCTCT GATGTGCTGCAGTTCTCCAAACCATAGTATACCTGGCGCACACGTCGCTT GAGAGTTGTTGAGGGATAAATCCTTGATATATTGAGCTACCCCTTGAGTA TTTCATGGAGGCAAGGCGTTCTTGTGGTTTGTGTACAAGATCGAGGGACG CTCGCACCTCCTGTTCAATCGAAGCCCTACATCCAACAGTTCCTCTACAC AGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig710:216927..219929-

>mRNA_F-serratus_M_contig710.18317.1 ID=mRNA_F-serratus_M_contig710.18317.1|Name=mRNA_F-serratus_M_contig710.18317.1|organism=Fucus serratus male|type=CDS|length=1854bp|location=Sequence derived from alignment at F-serratus_M_contig710:216927..219929- (Fucus serratus male)
ATGATTGCGGCGGCGCGGGCGATTGAGTCTCGGAGAGAAGACCGCTTGTT
CAACGACCCCTTCGCGGAGTTGCTGATGATTGCGGCGGCGCGGGCGATTG
AGTCTCGGAGAGAAGACCGCTTGTTCAACGACCCCTTCGCGGAGTTGCTG
GCGGGACCCGAGGCCATGCGGAAAGTCGTCGACCGGCAAACGCAGACTAC
AAACCCCCCAAGGTCTGATGCAGACCGCGATCGCTCCGTTGAATCAGTCG
ACGGGACAGCAGAGCGTGAGAAGGGCCCCAGCTCATCGTCGAGAAGACTG
GCGATTCGCACGCGGTTCTGCGACGACTTCTTTGAAGACTGCGCCTGGGC
GAGGGGTATCAAGCAGGCGGGACCCGAGGCCATGCGGAAAGTCGTCGACC
GGCAAACGCAGACTACAAACCCCCCAAGGTCTGATGCAGACCGCGATCGC
TCCGTTGAATCAGTCGACGGGACAGCAGAGCGTGAGAAGGGCCCCAGCTC
ATCGTCGAGAAGACTGGCGATTCGCACGCGGTTCTGCGACGACTTCTTTG
AAGACTGCGCCTGGGCGAGGGGTATCAAGCAGATTGTGTCTCTTGGAGCC
GGTATGGACACGCGGGGGCTCCGACTTCAGGCTCCCAAAGACGCAACCAT
TGTGTCTCTTGGAGCCGGTATGGACACGCGGGGGCTCCGACTTCAGGCTC
CCAAAGACGCAACCGTTTTCGACGTAGATCAGGCGCAAGTAATACGAGTG
AAGAAAGGGCTTCTGATGAAAGCTAGAGCTGACGGAATGAGCTTGGAGGG
AAGGGGAGAAGGCGCCTCAAGAGCACGGGTTGTAGCAGTCGAAGCGGATC
TAAGTCATATAGGGTGGGAAGGCGAGCTTTTTGAGGCCGGTTTTGACCCG
GCACTGCCCAGCGCTTGGATTCTTGAAGGGCTGACAATGTTTTCGACGTA
GATCAGGCGCAAGTAATACGAGTGAAGAAAGGGCTTCTGATGAAAGCTAG
AGCTGACGGAATGAGCTTGGAGGGAAGGGGAGAAGGCGCCTCAAGAGCAC
GGGTTGTAGCAGTCGAAGCGGATCTAAGTCATATAGGGTGGGAAGGCGAG
CTTTTTGAGGCCGGTTTTGACCCGGCACTGCCCAGCGCTTGGATTCTTGA
AGGGCTGACAATGTACCTAGAAGAGAAAGAGCTCGTGCGTCTGATTGAGA
TTCTGGCCGGTCTTTGCACTCCGGGGAGGTACCTAGAAGAGAAAGAGCTC
GTGCGTCTGATTGAGATTCTGGCCGGTCTTTGCACTCCGGGGAGTGCCTT
CTGCGCTACCTGTGTTTCGTCGGGATCGGTGGCGCGAGGAAAGAGCGGTA
GCCAGCTTATGAGCACATGGAAGTGGGGCAGCGATGACCCGCAGTCATTC
TTCGACGTGCCTTCTGCGCTACCTGTGTTTCGTCGGGATCGGTGGCGCGA
GGAAAGAGCGGTAGCCAGCTTATGAGCACATGGAAGTGGGGCAGCGATGA
CCCGCAGTCATTCTTCGACGCTCGCTTTCCTGCGGGGTGGTCTTTCAAGG
GTGTTACGTGCGGCACACCAGGACAGTTTCCGACGGGGGCAGACTACTCT
GTGGGGTTCCAGGGCAAAGGTCCCGCGTACGTGATCGGTTATTTGTCCGG
AAAGGGGTCGTCATCGTCACAATTGTATGAGTTGTGACTCGCTTTCCTGC
GGGGTGGTCTTTCAAGGGTGTTACGTGCGGCACACCAGGACAGTTTCCGA
CGGGGGCAGACTACTCTGTGGGGTTCCAGGGCAAAGGTCCCGCGTACGTG
ATCGGTTATTTGTCCGGAAAGGGGTCGTCATCGTCACAATTGTATGAGTT
GTGA
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