mRNA_F-serratus_M_contig710.18317.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig710.18317.1 vs. uniprot
Match: D8LGT9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGT9_ECTSI) HSP 1 Score: 392 bits (1007), Expect = 3.860e-131 Identity = 213/328 (64.94%), Postives = 245/328 (74.70%), Query Frame = 1
Query: 43 DLDLKSIDIVAFSSRMIAAARAIESRREDRLFNDPFAELLAGPEAMRKVVDR-QTQTTNPPRSDADRDRSVESVDGTAEREKGPSSSSRRLAIRTRFCDDFFEDCAWARGIKQIVSLGAGMDTRGLRLQAPKDATVFDVDQAQVIRVKKGLLMKARA-DGMSL------EGRGEGASRARVVAVEADLSHIGWEGELFEAGFDPALPSAWILEGLTMYLEEKELVRLIEILAGLCTPGSAFCATCVSSGSVARGK-SGSQLMSTWKWGSDDPQSFFDARFPAGWSFKGVTCGTPGQFPTGADYSVGFQGKGPAYVIGYLSGKGSSSSQ 999
+LDL S D VA+SSRMIAAARA+ESRR DRLF+DP+AELLAGP+AM+ V D+ Q +++ PP + + DG P RRLAIRTRFCDDFFEDCA RGIKQIVSLGAGMDTRGLRL+A D VF+VDQA V+RVK LL +A A D ++ E R G + RVV VEADLS GW+GELFEAGFDP+LPSAWILEGLTMYLEEKELV L+ +LA L +PGSAFCATCVS+ SV R + S S LM WKWGSD+PQ+FF+A FP GWSF GVTCGTPG+FP GADY VGF GK PAYVIGY S SSSS+
Sbjct: 71 NLDLTSSDTVAYSSRMIAAARALESRRRDRLFDDPYAELLAGPDAMQTVEDKAQEESSLPPLEATAAATAAAASDGV------PRDVQRRLAIRTRFCDDFFEDCAGPRGIKQIVSLGAGMDTRGLRLRASGDTKVFEVDQALVLRVKGALLTQAAAADEVAAALAGFRERRDGGVGQGRVVPVEADLSVEGWQGELFEAGFDPSLPSAWILEGLTMYLEEKELVALLRVLASLSSPGSAFCATCVSAESVERAQNSASPLMGRWKWGSDNPQAFFEANFPEGWSFNGVTCGTPGEFPQGADYGVGFVGKAPAYVIGYFSSSSSSSSR 392
BLAST of mRNA_F-serratus_M_contig710.18317.1 vs. uniprot
Match: D7FXP3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXP3_ECTSI) HSP 1 Score: 288 bits (736), Expect = 2.020e-91 Identity = 165/285 (57.89%), Postives = 189/285 (66.32%), Query Frame = 1
Query: 160 LAGPEAMRKVVDR-----QTQTTNPPRSDADRDRSVESVDGTAEREKGPSSSSRRLAIRTRFCDDFFEDCAWARGIKQIVSLGAGMDTRGLRLQAPKDATVFDVDQAQVIRVKKGLLMKARA-DGMSL------EGRGEGASRARVVAVEADLSHIGWEGELFEAGFDPALPSAWILEGLTMYLEEKELVRLIEILAGLCTPGSAFCATCVSSGSVARGK-SGSQLMSTWKWGSDDPQSFFDARFPAGWSFKGVTCGTPGQFPTGADYSVGFQGKGPAYVIGYLS 975
LAGP+ ++ V DR Q + + PP + + DG P RLAIRTRFCDDFFEDCA RGIKQIVSLGAGMDTRGLR +A D VF+VDQA V+RVK LL +A A D ++ E R G + RVV V+A LS GW+GELFEAG DP+LPSAWILEGL MYLEEKELV L+ +LA L +PGSAFCAT VS+ SV R S S M WK GSD P +FF+A P GWSF GVTCGTPG+FP GADY V F GK AYVIGY S
Sbjct: 11 LAGPDPIQTVEDREKVKAQEELSAPPLEATTAATAAAASDGV------PRDVQTRLAIRTRFCDDFFEDCAGPRGIKQIVSLGAGMDTRGLRRRASGDTKVFEVDQALVLRVKSALLTQAAAADEVAAALAGFRERRDGGVGQGRVVPVQAALSVEGWQGELFEAGSDPSLPSAWILEGLNMYLEEKELVALLRVLASLSSPGSAFCATYVSAESVERTHISASPPMGRWKRGSDKPPAFFEANSPQGWSFNGVTCGTPGEFPEGADYGVDFVGKAAAYVIGYFS 289
BLAST of mRNA_F-serratus_M_contig710.18317.1 vs. uniprot
Match: A0A2N3VS80_9ACTN (S-adenosyl-L-methionine-dependent methyltransferase n=4 Tax=Streptomyces TaxID=1883 RepID=A0A2N3VS80_9ACTN) HSP 1 Score: 135 bits (340), Expect = 9.170e-33 Identity = 100/301 (33.22%), Postives = 157/301 (52.16%), Query Frame = 1
Query: 25 PSAGADDLDLKSIDIVAFSSRMIAAARAIESRREDRLFNDPFAELLAG---PEAMRKVVDRQTQTTNPPRSDADRDRSVESVDGTAEREKGPSSSSRRLAIRTRFCDDFFEDCAWARGIKQIVSLGAGMDTRGLRLQAPKDATVFDVDQAQVIRVKKGLLMKARADGMSLEGRGEGASRARVVAVEADLSHIGWEGELFEAGFDPALPSAWILEGLTMYLEEKELVRLIEILAGLCTPGSAFCATCVSSGSVARGKSGSQLM------STWKWGSDDPQSFFDARFPAGWSFKGVTCGTPG 900
P+ G ++ + +D V ++ + AA RA E+RR DR++ DP+A+ L G PE + ++ Q T P AD R++ PS+ AIRTRF DD+ ++ A G++QIV AGMD+R RL P+ ++VD+ V+ KK R +G+S + R VAV DL+ WE +L AG+DPALPS W+LEGL Y+ E++ R++ +A PGS A V++ ++ + L W +G+D+P++ FD+ G+S + + G PG
Sbjct: 31 PTEGDENPVTELLDAVERTALLTAALRAAETRRPDRIYQDPYADALCGETGPELLAEI----RQATFP----ADASRTL------------PSTPDYN-AIRTRFFDDYLQEAAREPGMRQIVLAPAGMDSRAYRLDWPEGLRYYEVDRPAVLAYKKD-----RLEGVSPR------TDHRTVAV--DLTSPDWEDDLLAAGYDPALPSTWLLEGLLYYIPEQDTHRILRRVADFSAPGSRIAADLVNAAALTLPQMRGLLEIFAGWGCPWLFGTDEPEALFDS---FGFSVEALQPGEPG 294
BLAST of mRNA_F-serratus_M_contig710.18317.1 vs. uniprot
Match: UPI001F049D51 (SAM-dependent methyltransferase n=1 Tax=Streptomyces sp. MUM 178J TaxID=2791991 RepID=UPI001F049D51) HSP 1 Score: 134 bits (336), Expect = 1.870e-32 Identity = 97/275 (35.27%), Postives = 137/275 (49.82%), Query Frame = 1
Query: 61 IDIVAFSSRMIAAARAIESRREDRLFNDPFAELLAG---PEAMRKVVDRQTQTTNPPRSDADRDRSVESVDGTAEREKGPSSSSRRL---AIRTRFCDDFFEDCAWARGIKQIVSLGAGMDTRGLRLQAPKDATVFDVDQAQVIRVKKGLLMKARADGMSLEGRGEGASRARVVAVEADLSHIGWEGELFEAGFDPALPSAWILEGLTMYLEEKELVRLIEILAGLCTPGSAFCATCVSSGSVARGKSGSQLM------STWKWGSDDPQSFFDA 849
+D V +S + AA RA E+RR DRL+ DP+AE L G P + ++ D + P A G +R G R L AIRTR+ DD AR + QIVS +GMD R RL P F++D+A V+ K+ L A RA AV ADL+ WE L +AG+DPALPSAW+LEG+ YL E+ + RL++ + + PGS A V++ + ++ QL W++G+DDP++ F A
Sbjct: 5 LDAVGRTSLLTAAMRAEETRRPDRLYTDPYAETLCGDLGPALLAELQDGTHGSAPAPVPAA----------GAGDR-NGRHPMPRPLDVNAIRTRYFDDRL--LLAARDVPQIVSAASGMDARAYRLHWPPGLRYFEIDRAAVLAYKRDRLADA-------------VPRAEHRAVAADLTSPDWEARLVDAGYDPALPSAWLLEGMLYYLPEEAVCRLLDRIRRITAPGSVLAADLVNAAGLTLPQARGQLDVFARWGCPWQYGADDPEALFAA 253
BLAST of mRNA_F-serratus_M_contig710.18317.1 vs. uniprot
Match: A0A7K2JLH7_9ACTN (S-adenosyl-L-methionine-dependent methyltransferase n=2 Tax=unclassified Streptomyces TaxID=2593676 RepID=A0A7K2JLH7_9ACTN) HSP 1 Score: 133 bits (335), Expect = 2.160e-32 Identity = 99/286 (34.62%), Postives = 141/286 (49.30%), Query Frame = 1
Query: 61 IDIVAFSSRMIAAARAIESRREDRLFNDPFAELLAGPEAMRKVVDRQTQTTNPPRSDADRDRSVESVDGTAEREKGPSSSSRRLAIRTRFCDDFFEDCAWARGIKQIVSLGAGMDTRGLRLQAPKDATVFDVDQAQVIRVKKGLLMKARADGMSLEGRGEGASRARVVAVEADLSHIGWEGELFEAGFDPALPSAWILEGLTMYLEEKELVRLIEILAGLCTPGSAFCATCVSSGSVARGKSGSQLM------STWKWGSDDPQSFFDARFPAGWSFKGVTCGTPG 900
+D V ++ + AA RA ESRREDRL+ DP+A L G +A ++++ T PP DR RSV PS+ AIRTRF DD ++ R + Q+V AGMD+R RL P+ F+VD+ V+ K+ R G+ R V V DL+ WE L +G+DP PS W+LEGL Y+ EK+ R++E +A C PGS A V+ ++ L W +GSD+P++ F+ R+ G+ V G PG
Sbjct: 8 VDPVEKTALLTAALRAAESRREDRLYTDPYAATLVG-DAGPRLLEEVRAATFPP----DRPRSV------------PSTPDYN-AIRTRFFDDLLQEAVQDRAMTQLVVAPAGMDSRAYRLPWPRHLRYFEVDRQPVLTFKE-----ERLRGVD--------PRVDHVTVAVDLTADDWEDRLRASGYDPGTPSTWLLEGLLYYIPEKDTERMLERVAAFCAPGSRIAADLVNRAALTLPHMRPLLDVFRGWGCPWLFGSDEPEALFE-RY--GFDVAAVQPGEPG 259
BLAST of mRNA_F-serratus_M_contig710.18317.1 vs. uniprot
Match: A0A4Q9J1I0_9CYAN (S-adenosyl-L-methionine-dependent methyltransferase n=2 Tax=Westiellopsis TaxID=221285 RepID=A0A4Q9J1I0_9CYAN) HSP 1 Score: 132 bits (332), Expect = 3.880e-32 Identity = 83/258 (32.17%), Postives = 133/258 (51.55%), Query Frame = 1
Query: 64 DIVAFSSRMIAAARAIESRREDRLFNDPFAELLAGPEAMRKVVDRQTQTTNPPRSDADRDRSVESVDGTAEREKGPSSSSRRLAIRTRFCDDFFEDCAWARGIKQIVSLGAGMDTRGLRLQAPKDATVFDVDQAQVIRVKKGLLMKARADGMSLEGRGEGASRARVVAVEADLSHIGWEGELFEAGFDPALPSAWILEGLTMYLEEKELVRLIEILAGLCTPGSAFCATCVSSGSVARGKSGSQLMSTWKWGSDDPQS 837
D+V+ SSRM+AA RAIE++R D LF DP A +LAG + + ++ Q + + +A+RTRF DDF + I+Q+V LGAGMDTR RL +D ++++D+ +V++ K+ +L G SR ++E D+ W +L +G+ P +PS W++EG YL E ++ L++ + L PGS F A ++S V+ KS +L WK+G D+P++
Sbjct: 3 DLVSLSSRMMAAVRAIETQRPDGLFKDPLAAILAGDDIIAEIAPSAQQYED--------------------------QGTPVVAVRTRFFDDFL--MSQVDQIRQVVILGAGMDTRAFRLPWQRDTHLYELDRKEVLQYKESVL-------------GNIQSRCTRHSIEVDIKE-SWADKLIGSGYLPEIPSVWVMEGFVYYLSETQVHELLKTITKLSAPGSWFLADLINSFFVS--KSTDELSKHWKYGCDEPEN 216
BLAST of mRNA_F-serratus_M_contig710.18317.1 vs. uniprot
Match: A0A646KSM1_STRJU (S-adenosyl-L-methionine-dependent methyltransferase n=2 Tax=Streptomyces TaxID=1883 RepID=A0A646KSM1_STRJU) HSP 1 Score: 132 bits (332), Expect = 5.420e-32 Identity = 97/278 (34.89%), Postives = 140/278 (50.36%), Query Frame = 1
Query: 88 MIAAARAIESRREDRLFNDPFAELLAGPEAMRKVVDRQTQTTNPPRSDADRDRSVESVDGTAEREKGPSSSSRRLAIRTRFCDDFFEDCAWARGIKQIVSLGAGMDTRGLRLQAPKDATVFDVDQAQVIRVKKGLLMKARADGMSLEGRGEGASRARVVAVEADLSHIGWEGELFEAGFDPALPSAWILEGLTMYLEEKELVRLIEILAGLCTPGSAFCATCVSSGSVARGKSGSQLMST-------WKWGSDDPQSFFDARFPAGWSFKGVTCGTPG 900
+ AA RA E+RREDR++ DP+A LAG +A +++ T P A R R+V P + AIRTRF DDF D A G+ QIV AGMD+R R++ P F++D+ V+ K R G++ R V DL+ WE L +AG+DP LPS W+LEGL YL E + RL+E +A + PGS A V+S ++ S +L+ W++GSD+P++ F+ G++ + V G PG
Sbjct: 14 LTAALRAAETRREDRIYTDPYAARLAG-DAGPELLAEVRAATFP----AGRRRTV------------PDTPDFN-AIRTRFFDDFLHDAAREPGMTQIVIAPAGMDSRAYRMEWPGHIRFFEIDRTDVVEFKA-----ERLHGVT--------PRVAHRTVAVDLTDADWETRLTDAGYDPELPSTWLLEGLLYYLPEGDARRLLERVAAIAAPGSRIAADLVNSAALTL-PSMRELLEVFAGWGCPWQFGSDEPEALFER---CGFAVEAVQPGEPG 256
BLAST of mRNA_F-serratus_M_contig710.18317.1 vs. uniprot
Match: A0A6H5KGH3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGH3_9PHAE) HSP 1 Score: 128 bits (321), Expect = 9.600e-32 Identity = 60/83 (72.29%), Postives = 67/83 (80.72%), Query Frame = 1
Query: 730 GSAFCATCVSSGSVARGKSG-SQLMSTWKWGSDDPQSFFDARFPAGWSFKGVTCGTPGQFPTGADYSVGFQGKGPAYVIGYLS 975
GSAFCATCVS+ SV R ++ S LM WKWGSD+PQ+FF+A FP GWSF GVTCGTPG+FP GADY VGF GK PAYVIGY S
Sbjct: 74 GSAFCATCVSAESVERAQNNASPLMGRWKWGSDNPQAFFEANFPEGWSFNGVTCGTPGEFPEGADYGVGFVGKAPAYVIGYFS 156
BLAST of mRNA_F-serratus_M_contig710.18317.1 vs. uniprot
Match: A0A7S3UT70_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UT70_HETAK) HSP 1 Score: 132 bits (333), Expect = 2.660e-31 Identity = 114/346 (32.95%), Postives = 167/346 (48.27%), Query Frame = 1
Query: 55 KSIDIVAFSSRMIAAARAIESRREDRLFNDPFAELLAGPEAMRKVVDRQTQTTNPPRSDADRDRSVESVDGTAEREKGPSSSSRRLAIRTRFCDDFFEDCAWARGIKQIVSLGAGMDTRGLRL--------QAPK-------------------DATV-------FDVDQAQVIRVKKGLLMKARADGMSLEGRGEGASRARVVAVEADLSHIGWEGELFEAGFDPALPSAWILEGLTMYLEEKELVRLIEILAGLCTPGSAFCATCVSSGSVARGKSGSQ--LMSTWKWGSD---DPQSFFDARFPAGWSFKGVTCGTPGQFPTGADYSVGFQGKGPAYVIGYLS 975
+S D VAFSS+ +AAARAIE++R DRLF D ++ LAG +A+ +V ++ +T EKG +R ++IRT++ DDF E + GI+QIV +GAGMDTR RL Q PK D+ V ++VDQ +V+ K+ L M + L+ R + +V DL++ ++ L E+GFDP +PS WILEGL+MYL E + + L+E +A LC ++F + SQ LM W +G+D D S ++ P V G PG +PTGA Y + PA G ++
Sbjct: 54 ESADPVAFSSQRMAAARAIENKRRDRLFEDKVSQYLAG-QAL-EVAKQKMKT-----------------------EKG-YPRTRNISIRTKYFDDFLEHVSVEHGIEQIVLVGAGMDTRAFRLALAPQLKEQTPKRYDWLWRRGKNRRQLTAGEDSIVSVPSRCFYEVDQEKVLEEKEKL-MALLPRKLKLKHRRK--------SVYFDLTNGNFKKMLLESGFDPTMPSVWILEGLSMYLSEAQNIALLEQIASLCLHSASFVGLSFVNTKAVENAQNSQSPLMQQWVFGTDSLGDLLSKLESP-PKFHIISTVNLGDPGGYPTGASYHAYARRPNPAGTGGQVT 363
BLAST of mRNA_F-serratus_M_contig710.18317.1 vs. uniprot
Match: A0A5J6HQN4_STRAD (S-adenosyl-L-methionine-dependent methyltransferase n=2 Tax=Streptomyces TaxID=1883 RepID=A0A5J6HQN4_STRAD) HSP 1 Score: 130 bits (327), Expect = 2.820e-31 Identity = 96/277 (34.66%), Postives = 136/277 (49.10%), Query Frame = 1
Query: 88 MIAAARAIESRREDRLFNDPFAELLAGPEAMRKVVDRQTQTTNPPRSDADRDRSVESVDGTAEREKGPSSSSRRLAIRTRFCDDFFEDCAWARGIKQIVSLGAGMDTRGLRLQAPKDATVFDVDQAQVIRVKKGLLMKARADGMSLEGRGEGASRARVVAVEADLSHIGWEGELFEAGFDPALPSAWILEGLTMYLEEKELVRLIEILAGLCTPGSAFCATCVSSGSVARGKSGSQLM------STWKWGSDDPQSFFDARFPAGWSFKGVTCGTPG 900
+ AA RA E+ REDRL+ DP+A LAG + + + T T P DR RS+ PS+ AIRTRF DDF A R + QIV +GMD+R R+ P F+VD+ V+ K G R G+ A R V DL+ WE +L +AG+DP LPS W+LEGL Y+ E + R++E +A + PGS A V++ +++ L W +G+D+P+ FD R+ G+S + G PG
Sbjct: 14 LTAALRAAETLREDRLYEDPYAARLAGEAGPQLLAEVHTATFPP-----DRPRSL------------PSTPDYN-AIRTRFFDDFLVGAAQDRQMSQIVLAPSGMDSRAYRISWPDHIRYFEVDRPAVLDFKSG-----RLQGV--------APRVAHRTVAVDLTADDWESQLIDAGYDPTLPSTWLLEGLLYYIPEPDTHRMLERVAAITAPGSRIAADVVNAAALSLPHMRGLLDVFANWGCPWLFGTDEPEDLFD-RY--GFSVEAKQPGEPG 256 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig710.18317.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig710.18317.1 >prot_F-serratus_M_contig710.18317.1 ID=prot_F-serratus_M_contig710.18317.1|Name=mRNA_F-serratus_M_contig710.18317.1|organism=Fucus serratus male|type=polypeptide|length=309bp MIAAARAIESRREDRLFNDPFAELLAGPEAMRKVVDRQTQTTNPPRSDADback to top mRNA from alignment at F-serratus_M_contig710:216927..219929- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig710.18317.1 ID=mRNA_F-serratus_M_contig710.18317.1|Name=mRNA_F-serratus_M_contig710.18317.1|organism=Fucus serratus male|type=mRNA|length=3003bp|location=Sequence derived from alignment at F-serratus_M_contig710:216927..219929- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig710:216927..219929- >mRNA_F-serratus_M_contig710.18317.1 ID=mRNA_F-serratus_M_contig710.18317.1|Name=mRNA_F-serratus_M_contig710.18317.1|organism=Fucus serratus male|type=CDS|length=1854bp|location=Sequence derived from alignment at F-serratus_M_contig710:216927..219929- (Fucus serratus male)back to top |