mRNA_F-serratus_M_contig7.18113.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig7.18113.1 vs. uniprot
Match: D7FV70_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV70_ECTSI) HSP 1 Score: 291 bits (745), Expect = 3.160e-94 Identity = 175/234 (74.79%), Postives = 187/234 (79.91%), Query Frame = 2
Query: 158 MPKGGRLVFKGGEPAMSSRGKKKDKLKXXXXXXXXXXXXEGGFSSTAAGGEGEEREGGESLGAGAVDEQQLQPLEEEMRPVSGTGRITSSGTAVQGHEAKFMDELHAGDAILITHPTTLREETRIVKMVLSNMSIGISSPFSSDLISTTKFRFIRAPRVELSAEAKKEEAKRQKTQEEDSAFGTYAGAGGKRLVYRERTPQGNYRIIERTVDEAMTREQMLEMRSKKKADRHCN 859
MPKGGRLVFKGGE A+SSRGKKKDKL XXXXXXXXXXX ST E EMRPVSGTGRITSSGTAV GHEAKFMDELH+GDAILITHPTTLREETRI+KMVLSNMSI ISSPFSSDLISTT FR+I+APR+E+SAE K EE K++K QEEDSAFGTYAGAGGKRLVYRERTP GNYRIIE TVDEAMTRE+ML+MR+ KKADRHCN
Sbjct: 1 MPKGGRLVFKGGEVAVSSRGKKKDKLXXXXXXXXXXXX----XXSTG--------EAAXXXXXXXXXXXXXXXXXXEMRPVSGTGRITSSGTAVHGHEAKFMDELHSGDAILITHPTTLREETRIIKMVLSNMSISISSPFSSDLISTTNFRYIKAPRLEVSAETKAEERKKRKVQEEDSAFGTYAGAGGKRLVYRERTPAGNYRIIETTVDEAMTREEMLDMRATKKADRHCN 222
BLAST of mRNA_F-serratus_M_contig7.18113.1 vs. uniprot
Match: A0A835Z5I8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5I8_9STRA) HSP 1 Score: 169 bits (427), Expect = 5.260e-47 Identity = 89/159 (55.97%), Postives = 118/159 (74.21%), Query Frame = 2
Query: 386 EMRPVSGTGRITSSGTAVQGHEAKFMDELHAGDAILITHPTTLREETRIVKMVLSNMSIGISSPFSSDLISTTKFRFIRAPRVELSAEAKKEEAKRQKTQEEDSAFGTYAGAGGKRLVYRERTP--QGNYRIIERTVDEAMTREQMLEMRSKKKADRHC 856
E+RPV+GTGRI+SSGT V GH +FM EL AGDA+++THPT+L +ETR+V+MVLS+ G+SS FS+DLISTT F+++ APR E AE AKR + QEED AFGTY+ GG ++VYR + G Y I+ ++MTRE++L +RSKKKADR+C
Sbjct: 33 ELRPVAGTGRISSSGTVVTGHGTRFMSELRAGDALIVTHPTSLAQETRLVRMVLSDAHAGVSSAFSTDLISTTAFQYVSAPRGE--AEDPAVAAKRARLQEEDRAFGTYSSGGGSKVVYRVKKAGVYGGYEIVTADSKKSMTREELLNVRSKKKADRYC 189
BLAST of mRNA_F-serratus_M_contig7.18113.1 vs. uniprot
Match: A0A024UEL5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UEL5_9STRA) HSP 1 Score: 150 bits (380), Expect = 8.240e-40 Identity = 84/159 (52.83%), Postives = 110/159 (69.18%), Query Frame = 2
Query: 398 VSGTGRITSSGTAVQGHEA-KFMDELHAGDAILITHPTTLREETRIVKMVLSNMSIGISSPFSSDLISTTKFRFIRAPRVELSAEAKKEEAKRQKTQEEDSAFGTYAGA--GGKRLVYRERTP--QGNYRIIERTVDEAMTREQMLEMRSKKKADRHCN 859
+ GTGRI +SGT V G KF EL GDA++I HPT+L+EETRIVKMVLS++S+ ISSPFSSDL+STT F +I+AP E+ +A + + + +K EE SAFGTYAG G YR + G Y II+ T D +RE++L++RSK+K DRHCN
Sbjct: 53 LQGTGRILTSGTTVMGKMGTKFFHELSIGDALIINHPTSLKEETRIVKMVLSDVSVSISSPFSSDLVSTTTFWYIKAPPEEVDKDAVESKKRSKKNDEEASAFGTYAGGTTAGTEFTYRVKKAGVYGGYAIIKETADANRSREELLDIRSKRKGDRHCN 211
BLAST of mRNA_F-serratus_M_contig7.18113.1 vs. uniprot
Match: A0A7S2S051_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S051_9STRA) HSP 1 Score: 149 bits (375), Expect = 5.750e-39 Identity = 86/157 (54.78%), Postives = 112/157 (71.34%), Query Frame = 2
Query: 398 VSGTGRITSSGTAVQGHEA-KFMDELHAGDAILITHPTTLREETRIVKMVLSNMSIGISSPFSSDLISTTKFRFIRAPRVELSAEAKKEEAKRQKTQEEDSAFGTYAGAGGKRLVYRERTPQ--GNYRI-IERTVDEAMTREQMLEMRSKKKADRHC 856
V+G GRI++SGT V GHE +FM +L GDA++ITHPTT+ +ETRIVKMVLS++S+ ISSPFSSDLIST +FRF++AP E+ EA + + K++ E AFGTYAG G + VYRE+ G Y I +E T D + T +LEMR+ KKADR C
Sbjct: 65 VAGKGRISTSGTTVHGHEGTQFMKQLKHGDAVIITHPTTMMDETRIVKMVLSDVSMSISSPFSSDLISTVEFRFVKAPEEEVDYEAIENQKKQKLLDTEKEAFGTYAGDLGTKFVYREKKAGAFGGYAIRVEDTADRSRT--DLLEMRAGKKADRFC 219
BLAST of mRNA_F-serratus_M_contig7.18113.1 vs. uniprot
Match: W4H648_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H648_9STRA) HSP 1 Score: 147 bits (372), Expect = 1.190e-38 Identity = 81/159 (50.94%), Postives = 110/159 (69.18%), Query Frame = 2
Query: 398 VSGTGRITSSGTAVQGHEA-KFMDELHAGDAILITHPTTLREETRIVKMVLSNMSIGISSPFSSDLISTTKFRFIRAPRVELSAEAKKEEAKRQKTQEEDSAFGTYAG--AGGKRLVYRERTP--QGNYRIIERTVDEAMTREQMLEMRSKKKADRHCN 859
+ GTGRI +SGT V G KF EL GDA++I HPT+++EETRIVKMVLS++SI ISSPFSSDL+STT F +I+AP E+ +A + + + +K +EE AFGTYAG + G YR + G Y +++ T D +RE +L++RSK+K DRHCN
Sbjct: 52 LQGTGRILTSGTTVMGKMGTKFYHELSIGDALIIMHPTSMKEETRIVKMVLSDVSISISSPFSSDLVSTTTFSYIKAPPEEIDQDAIETKKRSKKNEEETFAFGTYAGGTSAGSEFTYRVKKAGAYGGYAVLKETADANRSREDLLDIRSKRKGDRHCN 210
BLAST of mRNA_F-serratus_M_contig7.18113.1 vs. uniprot
Match: A0A1V9YA44_9STRA (Niemann-Pick C1 protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YA44_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.760e-38 Identity = 85/163 (52.15%), Postives = 109/163 (66.87%), Query Frame = 2
Query: 386 EMRPVSGTGRITSSGTAVQGHEA-KFMDELHAGDAILITHPTTLREETRIVKMVLSNMSIGISSPFSSDLISTTKFRFIRAPRVELSAEAKKEEAKRQKTQEEDSAFGTYAGA--GGKRLVYRERTP--QGNYRIIERTVDEAMTREQMLEMRSKKKADRHCN 859
E+ V GTGRI +SGT V G +F EL GDA++I HPT+L+EETRIV+MVLS++SI ISS FSSDL+STT F +I+AP K+ K+QK EE AFGTYAG G +L YR + G Y II+ T D + +RE++L++RSK K DRHCN
Sbjct: 50 ELVKVQGTGRILTSGTTVMGKMGTRFASELSVGDAMIIVHPTSLQEETRIVRMVLSDVSISISSAFSSDLVSTTTFHYIKAPPDXXXXAQKELATKKQKKDEEGFAFGTYAGGTTAGSQLTYRVKKSGVYGGYTIIKETADTSRSREELLDLRSKMKGDRHCN 212
BLAST of mRNA_F-serratus_M_contig7.18113.1 vs. uniprot
Match: A0A7S2D383_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D383_9STRA) HSP 1 Score: 146 bits (368), Expect = 2.960e-38 Identity = 82/156 (52.56%), Postives = 110/156 (70.51%), Query Frame = 2
Query: 401 SGTGRITSSGTAVQGHE-AKFMDELHAGDAILITHPTTLREETRIVKMVLSNMSIGISSPFSSDLISTTKFRFIRAPRVELSAEAKKEEAKRQKTQEEDSAFGTYAGAGGKRLVYRERTP--QGNYRIIERTVDEA-MTREQMLEMRSKKKADRHC 856
+G+GRI++SGT V GH+ ++FMDELH GDAI++THP +L +ETRI+ MVLSN+S+ +SS FSSDLIST+ FRF+ PR E+ + ++++ E AFGTYAG G++ VYRER P G Y I EA +R ++L MRSKKKADR C
Sbjct: 39 TGSGRISTSGTIVTGHDGSRFMDELHNGDAIIVTHPASLIDETRIITMVLSNVSMNMSSAFSSDLISTSDFRFVNQPREEVDHTIAESRKRQKRVDGEKDAFGTYAGDLGEKFVYRERKPGVYGGYYICSEDNGEAPKSRGELLNMRSKKKADRMC 194
BLAST of mRNA_F-serratus_M_contig7.18113.1 vs. uniprot
Match: A0A7S3ZK63_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZK63_9STRA) HSP 1 Score: 146 bits (369), Expect = 3.450e-38 Identity = 81/146 (55.48%), Postives = 105/146 (71.92%), Query Frame = 2
Query: 401 SGTGRITSSGTAVQGHEA-KFMDELHAGDAILITHPTTLREETRIVKMVLSNMSIGISSPFSSDLISTTKFRFIRAPRVELSAEAKKEEAKRQKTQEEDSAFGTYAGAGGKRLVYRERTP-----QGNYRIIERTVDEAMTREQML 820
+G+GRI+SSGTAV+GH+ +FM EL AGDA++ITHPTTL EETRIVKMVLS++SI ISS FSSDL+STT FR++ APRVE SA K+ +A +++ ED A G YAG GG LVYR R ++I+ + E TR ++L
Sbjct: 67 AGSGRISSSGTAVRGHDGTRFMAELRAGDAVVITHPTTLTEETRIVKMVLSDVSIAISSAFSSDLVSTTAFRYVAAPRVEQSAADKERDAAQRRVLREDGAVGDYAGGGGTTLVYRTRKKGAVGGSNGWKIVTEKLAEPKTRTELL 212
BLAST of mRNA_F-serratus_M_contig7.18113.1 vs. uniprot
Match: A0A485LKB6_9STRA (Aste57867_21986 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKB6_9STRA) HSP 1 Score: 146 bits (369), Expect = 3.550e-38 Identity = 84/168 (50.00%), Postives = 111/168 (66.07%), Query Frame = 2
Query: 374 PLEEEMR--PVSGTGRITSSGTAVQGHEA-KFMDELHAGDAILITHPTTLREETRIVKMVLSNMSIGISSPFSSDLISTTKFRFIRAPRVELSAEAKKEEAKRQKTQEEDSAFGTYAGA--GGKRLVYRERTP--QGNYRIIERTVDEAMTREQMLEMRSKKKADRHC 856
P EEE + V GTGRI +SGT V G +F EL GDA++I HPT+L+EETRI+ MVLS++S+ ISSPFS+DL+STT F +I+AP+ E+ + + KR+K EE AFGTYAG G YR + G Y I++ T D +RE +L++RSKKK DRHC
Sbjct: 45 PAEEEFQLVKVQGTGRILTSGTTVMGKMGTRFSHELSIGDALIIVHPTSLKEETRIITMVLSDVSVSISSPFSTDLVSTTTFSYIKAPKEEVDVADLENKKKRKKNDEELFAFGTYAGGTTAGTEFTYRVKKAGVYGGYAILKETADSNRSREDLLDIRSKKKGDRHC 212
BLAST of mRNA_F-serratus_M_contig7.18113.1 vs. uniprot
Match: A0A6G0XV17_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XV17_9STRA) HSP 1 Score: 144 bits (363), Expect = 2.590e-37 Identity = 83/166 (50.00%), Postives = 111/166 (66.87%), Query Frame = 2
Query: 374 PLEEEMRPVSGTGRITSSGTAVQGHEA-KFMDELHAGDAILITHPTTLREETRIVKMVLSNMSIGISSPFSSDLISTTKFRFIRAPRVELSAEAKKEEAKRQKTQEEDSAFGTYAGAG--GKRLVYRERTP--QGNYRIIERTVDEAMTREQMLEMRSKKKADRHC 856
P E ++ + G+GRI +SGT V G +F EL GDA++I HPT+L+EETRIV MVLS++SI ISSPFSSDLISTT F +I+AP E+ + + + +R+ QEE AFGTYAG G YR + G Y I++ T D +RE++L++RSKKK DRHC
Sbjct: 46 PEEFQLVKLQGSGRILTSGTTVMGKMGTRFSHELSIGDALIILHPTSLKEETRIVTMVLSDVSISISSPFSSDLISTTTFSYIKAPPEEVDKDELETKKRRKNEQEESFAFGTYAGGTTVGTEYTYRVKKSGAYGGYAIVKETADSNRSREELLDIRSKKKGDRHC 211 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7.18113.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig7.18113.1 >prot_F-serratus_M_contig7.18113.1 ID=prot_F-serratus_M_contig7.18113.1|Name=mRNA_F-serratus_M_contig7.18113.1|organism=Fucus serratus male|type=polypeptide|length=235bp MPKGGRLVFKGGEPAMSSRGKKKDKLKRKRDKALARAEAEGGFSSTAAGGback to top mRNA from alignment at F-serratus_M_contig7:61228..63951+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig7.18113.1 ID=mRNA_F-serratus_M_contig7.18113.1|Name=mRNA_F-serratus_M_contig7.18113.1|organism=Fucus serratus male|type=mRNA|length=2724bp|location=Sequence derived from alignment at F-serratus_M_contig7:61228..63951+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig7:61228..63951+ >mRNA_F-serratus_M_contig7.18113.1 ID=mRNA_F-serratus_M_contig7.18113.1|Name=mRNA_F-serratus_M_contig7.18113.1|organism=Fucus serratus male|type=CDS|length=1410bp|location=Sequence derived from alignment at F-serratus_M_contig7:61228..63951+ (Fucus serratus male)back to top |