mRNA_F-serratus_M_contig7.18162.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig7.18162.1
Unique NamemRNA_F-serratus_M_contig7.18162.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig7.18162.1 vs. uniprot
Match: D8LMV4_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMV4_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 1.140e-6
Identity = 37/63 (58.73%), Postives = 41/63 (65.08%), Query Frame = 1
Query: 1624 DLHGRAVGEDFHETVATSLKVAASSALSG--------------ELSEIKRRVKKLEEAVAALQ 1770
            D HGRA GEDFHETVAT LKVA  +AL                E+ E+KRRVKKLE+AVAALQ
Sbjct:  139 DAHGRAPGEDFHETVATPLKVAVGAALRAANPIVMSSPSVSQDEVGELKRRVKKLEDAVAALQ 201          
BLAST of mRNA_F-serratus_M_contig7.18162.1 vs. uniprot
Match: A0A6H5KHB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHB3_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 1.220e-6
Identity = 40/77 (51.95%), Postives = 48/77 (62.34%), Query Frame = 1
Query: 1624 DLHGRAVGEDFHETVATSLKVAASSALSG--------------ELSEIKRRVKKLEEAVAALQEVQEERIAAIMSPS 1812
            D HGRA GEDFHETVAT LKVA  +AL                E+ E+KRRVKKLE+AVAALQ  +    AA++ P+
Sbjct:  391 DAHGRAPGEDFHETVATPLKVAVGAALRAANPIVTSAPSVSQDEVGELKRRVKKLEDAVAALQAERFGANAALLGPA 467          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7.18162.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMV4_ECTSI1.140e-658.73Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KHB3_9PHAE1.220e-651.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig7contigF-serratus_M_contig7:1484802..1493899 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score62.4
Seed ortholog evalue8.6e-07
Seed eggNOG ortholog2880.D8LMV4
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1851
Cds size1851
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig7.18162.1prot_F-serratus_M_contig7.18162.1Fucus serratus malepolypeptideF-serratus_M_contig7 1484802..1493899 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932134.0999706-CDS-F-serratus_M_contig7:1484801..14848911622932134.0999706-CDS-F-serratus_M_contig7:1484801..1484891Fucus serratus maleCDSF-serratus_M_contig7 1484802..1484891 +
1690964164.385876-CDS-F-serratus_M_contig7:1484801..14848911690964164.385876-CDS-F-serratus_M_contig7:1484801..1484891Fucus serratus maleCDSF-serratus_M_contig7 1484802..1484891 +
1622932134.1300876-CDS-F-serratus_M_contig7:1490453..14919861622932134.1300876-CDS-F-serratus_M_contig7:1490453..1491986Fucus serratus maleCDSF-serratus_M_contig7 1490454..1491986 +
1690964164.408469-CDS-F-serratus_M_contig7:1490453..14919861690964164.408469-CDS-F-serratus_M_contig7:1490453..1491986Fucus serratus maleCDSF-serratus_M_contig7 1490454..1491986 +
1622932134.1782932-CDS-F-serratus_M_contig7:1492362..14924451622932134.1782932-CDS-F-serratus_M_contig7:1492362..1492445Fucus serratus maleCDSF-serratus_M_contig7 1492363..1492445 +
1690964164.4216838-CDS-F-serratus_M_contig7:1492362..14924451690964164.4216838-CDS-F-serratus_M_contig7:1492362..1492445Fucus serratus maleCDSF-serratus_M_contig7 1492363..1492445 +
1622932134.2046812-CDS-F-serratus_M_contig7:1493363..14934391622932134.2046812-CDS-F-serratus_M_contig7:1493363..1493439Fucus serratus maleCDSF-serratus_M_contig7 1493364..1493439 +
1690964164.4309464-CDS-F-serratus_M_contig7:1493363..14934391690964164.4309464-CDS-F-serratus_M_contig7:1493363..1493439Fucus serratus maleCDSF-serratus_M_contig7 1493364..1493439 +
1622932134.2270403-CDS-F-serratus_M_contig7:1493830..14938991622932134.2270403-CDS-F-serratus_M_contig7:1493830..1493899Fucus serratus maleCDSF-serratus_M_contig7 1493831..1493899 +
1690964164.4407933-CDS-F-serratus_M_contig7:1493830..14938991690964164.4407933-CDS-F-serratus_M_contig7:1493830..1493899Fucus serratus maleCDSF-serratus_M_contig7 1493831..1493899 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig7.18162.1

>prot_F-serratus_M_contig7.18162.1 ID=prot_F-serratus_M_contig7.18162.1|Name=mRNA_F-serratus_M_contig7.18162.1|organism=Fucus serratus male|type=polypeptide|length=617bp
MTRGLQQKLCTGATRQPAGPWRVGDITGPQDEVPAGDLRRMASGDLSKRT
RELDAINQACPPALGVTEDIKRNARPPLEHTPNARPRVQARTGEESTVQS
DGDEVVSGGSGIMYGEKSSNVSSRGGVITRSGRVPINSVISGRQPVVKKR
KRNGLCGLDKCGSTSEWAMPQGAACVDCGAAHTGNEFLCAACHRAGYGMG
KWRHLGPSMYAEAMAWFEQCRAAGEGLPTCVVESFVPSTSCLCSRTDCFF
ANFSKYRQKVSENKCVPCGSTTARQWRSGGERAEQYQLFFEGAGKNRADR
GMLQTKEVITAESTICNPCHMAFYNYVTSPGRHPTAKELLAVPAGPQLPQ
GSARAKSAVKRYVYETLAAGKVVCSEDIQARLVTERRANNIEDASAGHAR
RITLEMLQNVGEGVGDACLREYRGDGAFGEDKRKIFVYLIPTFGREDIIV
GLDREIRKIDRKNEGLRQQLQEARRDVEKGGTFARAMRTTYVKRAQEVGM
SASVVREDALGAPDLQNARRGSTLEDDNERQIVPARENLQQDLHGRAVGE
DFHETVATSLKVAASSALSGELSEIKRRVKKLEEAVAALQEVQEERIAAI
MSPSKNSGELSEIKRRV
back to top

mRNA from alignment at F-serratus_M_contig7:1484802..1493899+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig7.18162.1 ID=mRNA_F-serratus_M_contig7.18162.1|Name=mRNA_F-serratus_M_contig7.18162.1|organism=Fucus serratus male|type=mRNA|length=9098bp|location=Sequence derived from alignment at F-serratus_M_contig7:1484802..1493899+ (Fucus serratus male)
ATGACCCGTGGGCTACAGCAAAAGTTGTGTACTGGAGCTACTAGACAGCC GGCCGGACCGTGGAGGGTTGGAGACATCACAGGTCCCCAGGTAAGAATCA AACTTGCTTTGTGTGTTTTTGTTAGTCTGAGTTACTCTTGGTTGGTGCGT CATTTTGCCCACCTCCCCATGACCTGTACGACGCGTGGTTACTCGGTACT TCGACTACACCCTAGTTTGGCACCACTTGTACCTATCCACACCGCGCCAT CTTGAGAGACCATTGGCGTCGAAGACACTATGCACTATGTTCTATGTGGA GGTTGAATCGGCAGTCATTTCCGTCGTAGTCGCCACTTGATGTCCGTCAT CACAAAATGTGTGTGCGTGTAACCATCGTGTGTACCAGAAATCTCTTGAG AAACGTGACAAGACAAAGAGATCTTTTGAACTTCTTCAAAAAAAGGGACG TCTGTGTGTGTGTAGTACACAAGTACCAGTCCTGTGTTGAATGCATGGGC TGGCTACCTGTAAAACTCTACTAGTATTCTACGCACAACGGTACGGTAGT GGTCAGCCACTCTGTTCTACTCGTGTAGTATGCATTTGTGGCTGGCGTGG GCGGGCGGTGAGCGTGTATATCAATCTATCGTCTTGTACTGTACAGCACA TACATGTACAAAAGGTACATCCTAGAGGATCGAGGGTGTACGATTAAATC CCTAAGCCCTGGATCAATTCACTCTGGCGCTGTACAAACTCTACATGAAA CCACAGCCCGACAAGGACCCTACTCAGGTAAGGGTCACCGTAATATCTAT TGATATATTTTTTGGCTGTGTCATGCATTGCTGGACTCGCCGATCGTTGT CCGGCAGACGCGAAGGAATTTTTCAGGGTTATCGTCGATAACGCCTTTTT AGGCGGACACAGGCGAGGCGGTAATGCTACACGGCGGTAATTTTTCGGCG ATAGGCGTTTTTTCGTATTTTGGAGGTAACGACTTTGGCGGAGGCAGTAA AACCGAAATATGGCGGTAATTTTTCGGCGGTAAGCGTTTTTTTGTTTTTT GGCGGTAACGTAAACGGAGACTCAAAACTAGGCGGTACTTGCAGTGCCTA GCTACATGTTTTTGGCGCCCGTACGAACGGCAAACCTCTTTTCCGACGGT TAACCTTGCACATATACCTTTCCGAACGGTTTGGCGTTTTCATGCCAAAA GTCGAAGTAAAAACAAGAGGCAAAACTGCGGTTTCGTGTTTCATCTTGAA TGAATATGAGCAGCCTCATGAAAAACGAAAGACAAAAAAAAATCGAATTC CATTGATATCTTGATATAAACCCTAAAATAGCAACAAAACACACAACAAA ATGCCGAGAAAAGACTGAACAAGGGCAGGCAGACGAGGTATACGATCCAC ATGACCATTCCTGGTATCTATACGGTAAGGTCAACCGACATCTTCGACCT CTCGTCCTGCGCCGCCACGGATATCTGTGCACTCATGGCTTCCCTAGCTC GTGCCTGCGCGACAGCAGCGTCCAACTCGCGGATCTCGTCAATCAAGTGC CTGTTCAGCCGAATGAACATCATGCGCTCGACCTTACTTGCAAGCATCCT CCTGCGCAGGTCCCCAATGAGGTGGGCGAGCGCTGAAAATTTCCTCTCTG CCTCGCAGCTGGTGGCCTCGATCCCATGGTACAACCGAGCGATAAACGCC ATATACGACATTTCCGCCAGAGGCGTGACCGTGCTCGTCGTTGGGCATAC GCTGTCGGTGCCCCGCTGATTCCAAACCCCCAGCAAGGTTGAAAGCATCC ACGTTGAGCTGGCCCTGTTCTGCCAAGTACACCAACACCTCACGCCCGCT CAGCAAGCGCCACCCCGTGACGGCAGCCTGAGGCTCGGCGCTACCACTGT CACCACCACCACCGGCTGCCGCTCTCACACGTGCCTCGCGCCGTTCCTCT AGTCTCGAAAGCCTTTTGTTTTGGGGTAAATGTTCCGCGGGCTCCACGTC AACACTGGCGCCGGCACAGGCGTGGACGGCTGCGTCTGTGCATCCGAAAA CTCGGCAATCACCCCCTTCAACTCCTCTTCGATACAGGTCCTGAGGGCTG CAGGTTCACGAACTGGTCGACGCCAAGCCGCCTTCCGCCTCAGATCCAGC AACGCGAACAGACGCCCCACCTTCAGCGAGACCTTCCCCACACCCCTGTC TTCCTTCACCTCCAGCAGTACTTCCCGCACGTCTCGCGCCTCCAAGGTAA GCTCCGCTGCCTGGATCGAATCCGTGGGGATTCCGTCCGGTGCGGGTGGC AAGACGGTGGCGTTCGGCACCCGGATTGGGTGAGATTCTTCTTTGAGCAT CGCGATAACCTTGGCCACGATGAACATCGTCTGGCTGACGTGGGTGTCCC TGGCCCCTTGCTCCTGTATCGTGGCCTCGGGAGACGTCGTCCAGGAGGCT ACACACCTCGTTGGTGACGGTCCATTCGTGTGATGTCAGCTTCCGCGCGC TCTGGGGGTGTTGCCGAAAGTATTCGCTGATCGGAACCTTCAAGGCCAGA AGGTGGTCCATCATCTTGAACTGGCTGGTCCACCTTCTCGTCGGGGCATG TTCCGCAAGGGGAAAAATCGTGTGTGGTGGGAGGGGTGAGGGGGCCGGCA GGGCAGAGGGCGGAGGTGTCGATTTTTTATATTTGATATTTTTGTATTTA AATGTATGCGATGGAAATCTAACGAGGTCTAAGGGACACCAAACGTGAGC TGCCGATACGCGTCGAATTTGAAGACTAAAAGTTTCAATTTCAAGTAGTA TCATACAACACCTGTAGTGCATTGGGGGACCCGCCCCTACTGGGGGATCC CACCCTACACCGCGCGATTCCCCCCCCCCTGCACTGCGGGATCCCCTACT GGGGGATTCCACCCTACACCGCGGGATCCCTCCTCCCTGCACTGCGGGAT AAAACCCCCCAAGCATCTAAAATAAAAAGTGCATTGGGGCGCAATTGTTT TTCGGTGAGTTAATGTCGCTGGTTCGACTCAACAAAATGTACACACTCCT AGCTAGAACTGTACTGTATATTTTACTTTGTGTTTATTATTTTTAATTTT AATTTTTTGCTGTTACCTTGGGAAGGCGTTCAGGGCGGGAATCCGGGGCA ATTGTATTCGGTGAGTTAATCTCGCTGGTTAGGTAGCCCCAGCAAAATGG ACACACTCCTAGCTAGCACTATATATTTTACTTTTGTGTTTTTGTGTTTT TGTGTTTTTGTGTTTTTGTGTTTTTGTGTGTGTGTGTGTGTTTTTGCTGT TACCTTGCTCTTAGCTAGCATTGTATATTTCACTTCTGTGTTTTTATTTT TTATGTTTTTTGCTCTTACCTCGGGAAGGCGTTCAGGGCGAGAATCCGGG GATCAAAAGAAAACAGGCAAAAAAAATAAAAAACACAAAAGTAAAATATA CAGTGCTAGCTAGGAATGTGTTCATTTTGTTGGGACGAACCGGCGAGATT AACCCACCAAAAAACAATTACCCTGGACTCCCGCCCTGAACGCCTTCCCA AGGTAACAGCAAAAAAAATAGAAATAAAAATAATAAACACCACAACAAAA TATACAGTTCTAGCTAGGAGTGTGTTCATTTTGTTGGGGAGAACCAGCGA AATTGACTCACCAAAAAATAATTACACCCCAATACACTTTTTATTTTAGA TGCTTGGGGGGGGGGGATCCCGCAGTGCATGGGGGGAGGATCCCGCGGTG TAGGGTGGAATCCCCCCGTAAGTGCAGGTCCCCCAATGCACTACAAACAC CGGAAAATACAAAATACTACCATAACATTTAAAATTTAACAATCGGCGAC TGAAAAACAAAAACGAAGTATAAGAAAATAGATATATTTCGTGCATTACA GCTGCAACAGAAACGAGTACCAGAGAATTCAAGATGAACAAACACAAAGC AAACACAAAATTCAAAATACAAATCACCTCGTGGCGTTTTGCCCGATGAG CTCGTAAATACGGTGGAGGTCCTCCTCCAGCTTCTGGAGTTCCTTCAGCA TGTCGTTGTGGCGGCGGAGTAGCTGAAGACACCGACACACGATACCAGCT TCTGCATCAGCTCGCCGATCGCTTTGTTCTTGCAACGCGCTGCAGCACCC GAAATGCCCAGACTCCACAAGACCGCGGAGTTGACGCGGTGGCAGTTGCA CTTGATGACCTCCACGCCCAATGCCTCACACGCGTTCACAACATTTTCAC CTTGATCTATTGTACAGCATATCCCGCATTTAACTTGATGCCAAGGTAAC TGTAAATAATGGTACATCCTATTTCAACAAGGGGTTCTACCGAAAAGGAA TCCGAACGAACCACAGAACCAGAAGAACAAAAGACAAAAAAAGTAGAAAA TGCCGAAAAAGTAGAGTCCCCGCGTGGGTTCGAACCACAGTTATCGGATA CCTACTGAGAGGCGCAGAGCCATTCCTTCTGACCATTCAGACATGGCGGT ACTTTCGTAGGCGGTATCACAGATGGCGGTACTTATTGGGCGGTAATGCC ATACGGCGGTAGTTTTTGGGCGGTCGGCGGTTTTTCGTTTTTTGGTGATA ACGACTTCGGCGGAGACTAAAGTATGGCGATAATTTATCGGCGGTAGGCG GTTTTCCGTTTTTTGGCGGCAACGACTTTGGCGGAGACGGTAAAACCAAA ATATGGCGGTAAACCGCCATATTACCGCTTCCGCCCACCAGGGCGGTAAT TCCACGGCGGGAAAATTACCGACGATAACCCTGGAATTTTTGTCTTTTCG TCGATATTGGCGGGCACCGTGGCTACTGTCTTATTTTGGAGTACGGATTT GTACGGTACCCACGCGAAGTGCCATATCCCTCCCACCTGCCGCTCCTCGC TGAACCCTTATGGGTCCGTCGTCACGTCCGTCCCACATCGCTGGGGACGG TCCATCTTCCGAGGGATCCGACAATGTGAGAAACAAGGGATTGATGACTC TTCACCTTCATGTTGAGTTCCCTATTTCACGAAACATAATATTCCAATCA TATCACACCATTGTCGAACCGTGGTCGTTCCAGAACATTTCGTCTTGCGG GCCGAATAGATGCGGAGGCAGTACACAACAGCATCTGCATGAAAGGGGAA GAGCCCTGTGAAATGGATGCTGTCTATTTTTTTGCTGAGAACGCTAGTCG TGGGTAGGCGATAACAATCCGGGTCGATCGAGGTTGCACTCGATATGGAG TAAGGATGTTTGATGAACCGTTTTGATATTGGTCGGTGCCATTACTTGTA AAGTCGCGTAACTTTTTGTCGCGATTTGGATCCCTGTTGGTCTACTGAGT AGCGGGTTGTCACCATGATGTGGCCCGTTGACCTTTGTACCTCTTTGTGA CCACAAGCGGGACTAGCATTTGACAGGTCTATGGCTGACTTGTTGTGTCA CCGTAGTTTCTTCAGTTGCAAGGACAATACGCTGAATGTGTGAATCAACA ACAACAACAACTGTGGTTTTGTTAACTTGGTCGCGCCAATAGTCTAAATA TATGTCCAGTCTCGTTCGAGGCTGTAGATCGAACCACTTGTGCTTGACTC ACCATTAATAGGTGAACCCCTTTCTTGCGCACTATCCCTATCAACACACC AGGACGAAGTACCTGCTGGCGATCTACGCCGTATGGCTTCAGGAGATCTC TCTAAACGAACACGCGAGTTGGACGCAATAAATCAAGCGTGTCCACCTGC ACTGGGAGTAACGGAGGATATAAAGCGAAATGCGCGTCCACCCTTGGAGC ACACGCCGAATGCTAGGCCTCGGGTACAAGCAAGGACGGGCGAAGAGTCC ACCGTGCAGAGCGACGGGGACGAAGTTGTGTCGGGAGGCAGCGGAATAAT GTACGGCGAAAAGTCCTCGAACGTGTCTAGTCGCGGAGGCGTCATCACCC GCTCGGGCAGGGTACCAATTAACAGCGTCATTTCTGGAAGGCAGCCGGTT GTGAAGAAACGTAAACGAAATGGACTGTGTGGCCTCGACAAATGTGGATC TACGTCCGAGTGGGCTATGCCCCAGGGGGCTGCTTGTGTAGATTGTGGCG CTGCTCACACCGGCAACGAGTTCTTGTGTGCGGCCTGTCACCGCGCAGGA TACGGCATGGGGAAATGGAGACACTTGGGGCCAAGCATGTATGCAGAAGC GATGGCATGGTTTGAGCAGTGCCGAGCGGCGGGAGAGGGTCTCCCGACTT GTGTTGTGGAGAGCTTCGTCCCTTCTACAAGCTGCCTATGCTCGAGGACT GATTGCTTTTTCGCAAATTTCTCCAAGTACCGGCAGAAGGTTTCTGAAAA CAAATGCGTACCTTGTGGTTCGACTACGGCTAGACAATGGAGAAGTGGTG GGGAACGCGCTGAGCAGTACCAGCTTTTTTTCGAGGGCGCTGGGAAAAAC CGAGCTGACCGTGGCATGCTCCAAACAAAAGAGGTGATCACCGCAGAGAG CACTATATGCAACCCTTGCCACATGGCGTTCTATAATTACGTTACGTCAC CAGGAAGGCATCCGACTGCAAAGGAGTTATTGGCGGTGCCTGCAGGACCC CAGCTTCCGCAGGGCAGCGCGAGAGCCAAAAGTGCCGTCAAACGCTATGT TTACGAAACACTGGCGGCGGGCAAGGTTGTGTGCAGTGAGGACATTCAGG CCAGGCTTGTTACGGAGCGGCGTGCGAACAATATTGAGGATGCTTCGGCT GGGCACGCTAGGAGGATCACGCTGGAAATGTTGCAGAATGTAGGCGAGGG TGTCGGGGACGCGTGCCTGCGAGAGTATCGCGGCGATGGAGCGTTTGGAG AGGACAAGAGAAAAATATTCGTGTACTTGATTCCCACGTTCGGCAGAGAG GATATTATTGTGGGGTTAGACCGAGAGATCCGGAAGATAGACAGAAAGAA CGAGGGCCTTCGTCAACAGTTGCAGGAGGCGCGCAGGGACGTTGAGAAAG GCGGTACCTTTGCGAGGGCGATGCGGACTACGTATGTCAAGCGGGCGCAG GAAGTCGGGATGAGTGCAAGCGTAGTGCGGGAGGATGCCTTGGGGGCACC GGATTTACAGAACGCGCGTCGGGGCTCGACACTTGAAGACGACAACGAAA GGCAAATCGTGCCGGCCAGGGAGAACCTGCAACAGGTACTGGAATTTTTG TGGGCGGTGAGCGAACCCAGTATCATTATTCGCCATCTCTTGGGTCTATT AATATTGTCGTCTTGGTGTTCCGTCGGTCCTTTCCACCCTACCACCGATT CCCGTTGCCGAAAGGAACACCACGATTCCGTACGCGAACTCCTAGCCGCA GGTGCTCACACAACCCTCAAGGTGGGTTACGGTGTTACCGCGTTGGCCGA TGGTTGTCTCGGAGTAATGCCGCGGCCGACGTTATGTTTAAAGCTTTTTC GTGGCTGCTGTTTGTGAGGTGTCAATATGACAAACGGAAGAAGAGCGTCT CCGTTGTGTCTCTGCCTCATACCCATACGATACCTTGTCGCGTCTTGCCA CTGAACTGCAGGACCTCCATGGACGGGCGGTTGGGGAGGACTTCCATGAG ACCGTGGCAACATCTCTCAAGGTCGCGGCCAGCTCTGCGCTAAGGTTAGA CATGGGTGCTTCGGTTCACCTTTTTCCGAGACACAAGTCACGCTTTTTTC TTTTTCTTTTTTCGCCCTCGTATTACGTCGGGAAGCGGCCCTGTCTCACC CGACTGTCTTGTCTTGCCAGCGAATCACTCGGCAGGGCAGCCAACCCGAA TACCATTGAAAGGATAAGACTCTAAATTGCGATCTAATTACTAATTACCA TCCTGCCTGTGGTCACAAAGGATCTTCCCATCTCTCCCCGGTTCACGCCT TGCAATTTTTATCGCGATGAAAGTTCAGCACTCTTACAACTCGTCAACCA ATGGTTGAATTTTACTTACTCACGTTCCCACGCTTTCCGTTACGAAAGAA AGAACACAAATTCTGCTTAAGCTAAGAATCGAACTCACGACTTCCGCACT AGCAGGTACGCAGGTTACCTACTAGACCACTCGGGCGACGAATGGGGAGA TCGTTATAACCAATTGGATGCTGGGATGGGTTTCCGTATTTGCATTCTTG GATGCGTATTCGGGATACCGGTGTGACTGCTCTTGTCGAGCACAACCTCC TGCCACCTGTTTAGTTCAATTGTGGATCTCTTTTGGCGTCGTGTGTCTTT TGTGTGTGCCCAAGATGTGGGTCACCGGGATGCTGAAATAATTTACCGGT TTTATGTTCGTCTGTGACATGTGTTTACGTCAAGCCTGCTGCGCACACCC CCAGCACAGCATCGACTCTCCCGTGTAAGACCCGTCCTTCCCAGAGACTT CCCATTGCACCACAGCTGAACTAAACAGTCGGGGGCTACCAAGCACATCC CCTAAGTATAAATTACTCATTTGCAATTGTTACTCGCTCATCAGTTATCT ACCTGCGCATTTTCAACGACTGAGTACAGCAACTGTTCAATCACGTCTCC GTCCAAAAACAGCGGCGAGTTAAGTGAAATCAAGCGGCGCGTCAAGAAGC TGGAAGAGGCCGTCGCGGCCCTCCAAGAGGTGCAAGAGGTGAATTATAAC GCAAAGCGACGGTTTTTGTTTCCATCGTAGTTTCACATTCGCCGCGTTAG ACAAAGACTCTGTAGTGTGTGTTTTCGTCAGTTGCATGCGGCTTTCGCCC AAGTTGAAAATGACCGACACGTGCACGCGCGGTCGAGTCGTGACCAACGT GTTCGCGAGGAAAACGCGTTTGAAAGTCCGGTCGTATTCTGTGCCCTCAA TTATTCGTTCGATCCTCTTATACCTAACAGCGATGGTGTTTTAATAGCGC CACGCTCAACTTCATGAGTGCGTCCATTGAACAGACGCGTGTTGTCTCAT AAGATATTTATCCCCGCCCCCCCCGGCTCCATGCCGGCCGTTTCGCCGCA CATTTGCTCGAAACCGCCCCTGGACGCAGGAGCGAATCGCCGCTATCATG TCTCCGTCCAAAAACAGCGGCGAGTTAAGTGAAATCAAGCGGCGCGTC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig7:1484802..1493899+

>mRNA_F-serratus_M_contig7.18162.1 ID=mRNA_F-serratus_M_contig7.18162.1|Name=mRNA_F-serratus_M_contig7.18162.1|organism=Fucus serratus male|type=CDS|length=3702bp|location=Sequence derived from alignment at F-serratus_M_contig7:1484802..1493899+ (Fucus serratus male)
ATGACCCGTGGGCTACAGCAAAAGTTGTGTACTGGAGCTACTAGACAGCC
GGCCGGACCGTGGAGGGTTGGAGACATCACAGGTCCCCAGATGACCCGTG
GGCTACAGCAAAAGTTGTGTACTGGAGCTACTAGACAGCCGGCCGGACCG
TGGAGGGTTGGAGACATCACAGGTCCCCAGGACGAAGTACCTGCTGGCGA
TCTACGCCGTATGGCTTCAGGAGATCTCTCTAAACGAACACGCGAGTTGG
ACGCAATAAATCAAGCGTGTCCACCTGCACTGGGAGTAACGGAGGATATA
AAGCGAAATGCGCGTCCACCCTTGGAGCACACGCCGAATGCTAGGCCTCG
GGTACAAGCAAGGACGGGCGAAGAGTCCACCGTGCAGAGCGACGGGGACG
AAGTTGTGTCGGGAGGCAGCGGAATAATGTACGGCGAAAAGTCCTCGAAC
GTGTCTAGTCGCGGAGGCGTCATCACCCGCTCGGGCAGGGTACCAATTAA
CAGCGTCATTTCTGGAAGGCAGCCGGTTGTGAAGAAACGTAAACGAAATG
GACTGTGTGGCCTCGACAAATGTGGATCTACGTCCGAGTGGGCTATGCCC
CAGGGGGCTGCTTGTGTAGATTGTGGCGCTGCTCACACCGGCAACGAGTT
CTTGTGTGCGGCCTGTCACCGCGCAGGATACGGCATGGGGAAATGGAGAC
ACTTGGGGCCAAGCATGTATGCAGAAGCGATGGCATGGTTTGAGCAGTGC
CGAGCGGCGGGAGAGGGTCTCCCGACTTGTGTTGTGGAGAGCTTCGTCCC
TTCTACAAGCTGCCTATGCTCGAGGACTGATTGCTTTTTCGCAAATTTCT
CCAAGTACCGGCAGAAGGTTTCTGAAAACAAATGCGTACCTTGTGGTTCG
ACTACGGCTAGACAATGGAGAAGTGGTGGGGAACGCGCTGAGCAGTACCA
GCTTTTTTTCGAGGGCGCTGGGAAAAACCGAGCTGACCGTGGCATGCTCC
AAACAAAAGAGGTGATCACCGCAGAGAGCACTATATGCAACCCTTGCCAC
ATGGCGTTCTATAATTACGTTACGTCACCAGGAAGGCATCCGACTGCAAA
GGAGTTATTGGCGGTGCCTGCAGGACCCCAGCTTCCGCAGGGCAGCGCGA
GAGCCAAAAGTGCCGTCAAACGCTATGTTTACGAAACACTGGCGGCGGGC
AAGGTTGTGTGCAGTGAGGACATTCAGGCCAGGCTTGTTACGGAGCGGCG
TGCGAACAATATTGAGGATGCTTCGGCTGGGCACGCTAGGAGGATCACGC
TGGAAATGTTGCAGAATGTAGGCGAGGGTGTCGGGGACGCGTGCCTGCGA
GAGTATCGCGGCGATGGAGCGTTTGGAGAGGACAAGAGAAAAATATTCGT
GTACTTGATTCCCACGTTCGGCAGAGAGGATATTATTGTGGGGTTAGACC
GAGAGATCCGGAAGATAGACAGAAAGAACGAGGGCCTTCGTCAACAGTTG
CAGGAGGCGCGCAGGGACGTTGAGAAAGGCGGTACCTTTGCGAGGGCGAT
GCGGACTACGTATGTCAAGCGGGCGCAGGAAGTCGGGATGAGTGCAAGCG
TAGTGCGGGAGGATGCCTTGGGGGCACCGGATTTACAGAACGCGCGTCGG
GGCTCGACACTTGAAGACGACAACGAAAGGCAAATCGTGCCGGCCAGGGA
GAACCTGCAACAGGACGAAGTACCTGCTGGCGATCTACGCCGTATGGCTT
CAGGAGATCTCTCTAAACGAACACGCGAGTTGGACGCAATAAATCAAGCG
TGTCCACCTGCACTGGGAGTAACGGAGGATATAAAGCGAAATGCGCGTCC
ACCCTTGGAGCACACGCCGAATGCTAGGCCTCGGGTACAAGCAAGGACGG
GCGAAGAGTCCACCGTGCAGAGCGACGGGGACGAAGTTGTGTCGGGAGGC
AGCGGAATAATGTACGGCGAAAAGTCCTCGAACGTGTCTAGTCGCGGAGG
CGTCATCACCCGCTCGGGCAGGGTACCAATTAACAGCGTCATTTCTGGAA
GGCAGCCGGTTGTGAAGAAACGTAAACGAAATGGACTGTGTGGCCTCGAC
AAATGTGGATCTACGTCCGAGTGGGCTATGCCCCAGGGGGCTGCTTGTGT
AGATTGTGGCGCTGCTCACACCGGCAACGAGTTCTTGTGTGCGGCCTGTC
ACCGCGCAGGATACGGCATGGGGAAATGGAGACACTTGGGGCCAAGCATG
TATGCAGAAGCGATGGCATGGTTTGAGCAGTGCCGAGCGGCGGGAGAGGG
TCTCCCGACTTGTGTTGTGGAGAGCTTCGTCCCTTCTACAAGCTGCCTAT
GCTCGAGGACTGATTGCTTTTTCGCAAATTTCTCCAAGTACCGGCAGAAG
GTTTCTGAAAACAAATGCGTACCTTGTGGTTCGACTACGGCTAGACAATG
GAGAAGTGGTGGGGAACGCGCTGAGCAGTACCAGCTTTTTTTCGAGGGCG
CTGGGAAAAACCGAGCTGACCGTGGCATGCTCCAAACAAAAGAGGTGATC
ACCGCAGAGAGCACTATATGCAACCCTTGCCACATGGCGTTCTATAATTA
CGTTACGTCACCAGGAAGGCATCCGACTGCAAAGGAGTTATTGGCGGTGC
CTGCAGGACCCCAGCTTCCGCAGGGCAGCGCGAGAGCCAAAAGTGCCGTC
AAACGCTATGTTTACGAAACACTGGCGGCGGGCAAGGTTGTGTGCAGTGA
GGACATTCAGGCCAGGCTTGTTACGGAGCGGCGTGCGAACAATATTGAGG
ATGCTTCGGCTGGGCACGCTAGGAGGATCACGCTGGAAATGTTGCAGAAT
GTAGGCGAGGGTGTCGGGGACGCGTGCCTGCGAGAGTATCGCGGCGATGG
AGCGTTTGGAGAGGACAAGAGAAAAATATTCGTGTACTTGATTCCCACGT
TCGGCAGAGAGGATATTATTGTGGGGTTAGACCGAGAGATCCGGAAGATA
GACAGAAAGAACGAGGGCCTTCGTCAACAGTTGCAGGAGGCGCGCAGGGA
CGTTGAGAAAGGCGGTACCTTTGCGAGGGCGATGCGGACTACGTATGTCA
AGCGGGCGCAGGAAGTCGGGATGAGTGCAAGCGTAGTGCGGGAGGATGCC
TTGGGGGCACCGGATTTACAGAACGCGCGTCGGGGCTCGACACTTGAAGA
CGACAACGAAAGGCAAATCGTGCCGGCCAGGGAGAACCTGCAACAGGACC
TCCATGGACGGGCGGTTGGGGAGGACTTCCATGAGACCGTGGCAACATCT
CTCAAGGTCGCGGCCAGCTCTGCGCTAAGGACCTCCATGGACGGGCGGTT
GGGGAGGACTTCCATGAGACCGTGGCAACATCTCTCAAGGTCGCGGCCAG
CTCTGCGCTAAGCGGCGAGTTAAGTGAAATCAAGCGGCGCGTCAAGAAGC
TGGAAGAGGCCGTCGCGGCCCTCCAAGAGGTGCAAGAGCGGCGAGTTAAG
TGAAATCAAGCGGCGCGTCAAGAAGCTGGAAGAGGCCGTCGCGGCCCTCC
AAGAGGTGCAAGAGGAGCGAATCGCCGCTATCATGTCTCCGTCCAAAAAC
AGCGGCGAGTTAAGTGAAATCAAGCGGCGCGTCGAGCGAATCGCCGCTAT
CATGTCTCCGTCCAAAAACAGCGGCGAGTTAAGTGAAATCAAGCGGCGCG
TC
back to top