prot_F-serratus_M_contig7.18162.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig7.18162.1
Unique Nameprot_F-serratus_M_contig7.18162.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length617
Homology
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BLAST of mRNA_F-serratus_M_contig7.18162.1 vs. uniprot
Match: D8LMV4_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMV4_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 1.140e-6
Identity = 37/63 (58.73%), Postives = 41/63 (65.08%), Query Frame = 0 
Query:  542 DLHGRAVGEDFHETVATSLKVAASSALSG--------------ELSEIKRRVKKLEEAVAALQ 590
            D HGRA GEDFHETVAT LKVA  +AL                E+ E+KRRVKKLE+AVAALQ
Sbjct:  139 DAHGRAPGEDFHETVATPLKVAVGAALRAANPIVMSSPSVSQDEVGELKRRVKKLEDAVAALQ 201
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BLAST of mRNA_F-serratus_M_contig7.18162.1 vs. uniprot
Match: A0A6H5KHB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHB3_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 1.220e-6
Identity = 40/77 (51.95%), Postives = 48/77 (62.34%), Query Frame = 0 
Query:  542 DLHGRAVGEDFHETVATSLKVAASSALSG--------------ELSEIKRRVKKLEEAVAALQEVQEERIAAIMSPS 604
            D HGRA GEDFHETVAT LKVA  +AL                E+ E+KRRVKKLE+AVAALQ  +    AA++ P+
Sbjct:  391 DAHGRAPGEDFHETVATPLKVAVGAALRAANPIVTSAPSVSQDEVGELKRRVKKLEDAVAALQAERFGANAALLGPA 467
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig7.18162.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMV4_ECTSI1.140e-658.73Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5KHB3_9PHAE1.220e-651.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 565..595
NoneNo IPR availableCOILSCoilCoilcoord: 449..476

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig7contigF-serratus_M_contig7:1484802..1493899 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig7.18162.1mRNA_F-serratus_M_contig7.18162.1Fucus serratus malemRNAF-serratus_M_contig7 1484802..1493899 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig7.18162.1 ID=prot_F-serratus_M_contig7.18162.1|Name=mRNA_F-serratus_M_contig7.18162.1|organism=Fucus serratus male|type=polypeptide|length=617bp
MTRGLQQKLCTGATRQPAGPWRVGDITGPQDEVPAGDLRRMASGDLSKRT
RELDAINQACPPALGVTEDIKRNARPPLEHTPNARPRVQARTGEESTVQS
DGDEVVSGGSGIMYGEKSSNVSSRGGVITRSGRVPINSVISGRQPVVKKR
KRNGLCGLDKCGSTSEWAMPQGAACVDCGAAHTGNEFLCAACHRAGYGMG
KWRHLGPSMYAEAMAWFEQCRAAGEGLPTCVVESFVPSTSCLCSRTDCFF
ANFSKYRQKVSENKCVPCGSTTARQWRSGGERAEQYQLFFEGAGKNRADR
GMLQTKEVITAESTICNPCHMAFYNYVTSPGRHPTAKELLAVPAGPQLPQ
GSARAKSAVKRYVYETLAAGKVVCSEDIQARLVTERRANNIEDASAGHAR
RITLEMLQNVGEGVGDACLREYRGDGAFGEDKRKIFVYLIPTFGREDIIV
GLDREIRKIDRKNEGLRQQLQEARRDVEKGGTFARAMRTTYVKRAQEVGM
SASVVREDALGAPDLQNARRGSTLEDDNERQIVPARENLQQDLHGRAVGE
DFHETVATSLKVAASSALSGELSEIKRRVKKLEEAVAALQEVQEERIAAI
MSPSKNSGELSEIKRRV
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