mRNA_F-serratus_M_contig69.17985.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig69.17985.1 vs. uniprot
Match: A0A6H5JRY4_9PHAE (HTH psq-type domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY4_9PHAE) HSP 1 Score: 194 bits (494), Expect = 8.860e-61 Identity = 95/150 (63.33%), Postives = 121/150 (80.67%), Query Frame = 1
Query: 1 MVRLRVDAEQAKKACAAVRGGMSVRSAAARFQVDRNAITRRLSGKVAMDGKVGPGTVMTEEEENAVEDILLFAARHFLSVGRVQLREAVRQLCNDGRKTPWEASKGPGKAWVQGFLKRYPRVSERSTHIYEANRITENDEPRIRRFYEVW 450
M R +VD EQ +KACAA+ GMSVR AA F V R +I R GKVAM+ KVG T++++EEE+++EDILLFAAR+FL+VGRV LR+AVR+LCNDGR+ PW+ KGPGK W+ GF +R+PRV+ERST IYEANRITE++EPR+ +FYE W
Sbjct: 1 MTRRKVDEEQVRKACAAIDDGMSVRKAAGVFGVGRTSIEDRRRGKVAMNAKVGAETILSKEEEDSLEDILLFAARNFLAVGRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFRRRHPRVAERSTRIYEANRITEDEEPRMVQFYERW 150
BLAST of mRNA_F-serratus_M_contig69.17985.1 vs. uniprot
Match: A0A6H5KKS3_9PHAE (HTH psq-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKS3_9PHAE) HSP 1 Score: 192 bits (487), Expect = 9.880e-59 Identity = 96/150 (64.00%), Postives = 117/150 (78.00%), Query Frame = 1
Query: 1 MVRLRVDAEQAKKACAAVRGGMSVRSAAARFQVDRNAITRRLSGKVAMDGKVGPGTVMTEEEENAVEDILLFAARHFLSVGRVQLREAVRQLCNDGRKTPWEASKGPGKAWVQGFLKRYPRVSERSTHIYEANRITENDEPRIRRFYEVW 450
M R RVDA+QA+KAC AVRGGMSVR AA + +DR ++ RRL G+VAMD KVGPGTVM+EEEEN++ED LL+A R+ L+V R+ L E VR LC D RKTPW+ KGPGK W+ GFL+R+PRV ER+T IYEANR+T+ EPRI FY W
Sbjct: 15 MGRRRVDAQQAQKACEAVRGGMSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKW 163
BLAST of mRNA_F-serratus_M_contig69.17985.1 vs. uniprot
Match: A0A6H5K547_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K547_9PHAE) HSP 1 Score: 191 bits (486), Expect = 3.480e-58 Identity = 94/150 (62.67%), Postives = 120/150 (80.00%), Query Frame = 1
Query: 1 MVRLRVDAEQAKKACAAVRGGMSVRSAAARFQVDRNAITRRLSGKVAMDGKVGPGTVMTEEEENAVEDILLFAARHFLSVGRVQLREAVRQLCNDGRKTPWEASKGPGKAWVQGFLKRYPRVSERSTHIYEANRITENDEPRIRRFYEVW 450
M R +VD E+ +KA AA+ GMSVR AA F V R +I R GKVAM+ KVGP T+++ EEE+++EDILL AAR+FL+V RV LR+AVR+LCNDGR+ PW+ KGPGK W+ GFL+R+PRV+ERSTHIYEANRITE++EPR+ +FYE W
Sbjct: 1 MTRCKVDEEKVRKAFAAIDNGMSVRKAAEVFGVGRTSIEDRRRGKVAMNAKVGPETILSREEEDSLEDILLVAARNFLAVDRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLGGFLRRHPRVAERSTHIYEANRITEDEEPRMVQFYERW 150
BLAST of mRNA_F-serratus_M_contig69.17985.1 vs. uniprot
Match: A0A6H5JFM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM5_9PHAE) HSP 1 Score: 194 bits (494), Expect = 2.900e-57 Identity = 95/150 (63.33%), Postives = 121/150 (80.67%), Query Frame = 1
Query: 1 MVRLRVDAEQAKKACAAVRGGMSVRSAAARFQVDRNAITRRLSGKVAMDGKVGPGTVMTEEEENAVEDILLFAARHFLSVGRVQLREAVRQLCNDGRKTPWEASKGPGKAWVQGFLKRYPRVSERSTHIYEANRITENDEPRIRRFYEVW 450
M R +VD EQ +KACAA+ GMSVR AA F V R +I R GKVAM+ KVG T++++EEE+++EDILLFAAR+FL+VGRV LR+AVR+LCNDGR+ PW+ KGPGK W+ GF +R+PRV+ERST IYEANRITE++EPR+ +FYE W
Sbjct: 1 MTRRKVDEEQVRKACAAIDDGMSVRKAAGVFGVGRTSIEDRRRGKVAMNAKVGAETILSKEEEDSLEDILLFAARNFLAVGRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFRRRHPRVAERSTRIYEANRITEDEEPRMVQFYERW 150
BLAST of mRNA_F-serratus_M_contig69.17985.1 vs. uniprot
Match: A0A6H5KJ62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ62_9PHAE) HSP 1 Score: 188 bits (477), Expect = 3.620e-56 Identity = 93/150 (62.00%), Postives = 119/150 (79.33%), Query Frame = 1
Query: 1 MVRLRVDAEQAKKACAAVRGGMSVRSAAARFQVDRNAITRRLSGKVAMDGKVGPGTVMTEEEENAVEDILLFAARHFLSVGRVQLREAVRQLCNDGRKTPWEASKGPGKAWVQGFLKRYPRVSERSTHIYEANRITENDEPRIRRFYEVW 450
M R +VD E+ +KA AA+ GMSVR AA F V R +I R GKVAM+ KVGP T+++ EEE+++EDILL AAR+FL+V RV LR+AVR+LCNDGR+ PW+ KGPGK W+ GFL+R+PRV+ERST IYEANRITE++EPR+ +FYE W
Sbjct: 1 MTRRKVDEEKVRKAFAAIDNGMSVRKAAEVFGVGRTSIEDRRRGKVAMNAKVGPETILSREEEDSLEDILLVAARNFLAVDRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLGGFLRRHPRVAERSTRIYEANRITEDEEPRMVQFYERW 150
BLAST of mRNA_F-serratus_M_contig69.17985.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE) HSP 1 Score: 192 bits (487), Expect = 6.860e-55 Identity = 96/150 (64.00%), Postives = 117/150 (78.00%), Query Frame = 1
Query: 1 MVRLRVDAEQAKKACAAVRGGMSVRSAAARFQVDRNAITRRLSGKVAMDGKVGPGTVMTEEEENAVEDILLFAARHFLSVGRVQLREAVRQLCNDGRKTPWEASKGPGKAWVQGFLKRYPRVSERSTHIYEANRITENDEPRIRRFYEVW 450
M R RVDA+QA+KAC AVRGGMSVR AA + +DR ++ RRL G+VAMD KVGPGTVM+EEEEN++ED LL+A R+ L+V R+ L E VR LC D RKTPW+ KGPGK W+ GFL+R+PRV ER+T IYEANR+T+ EPRI FY W
Sbjct: 1 MGRRRVDAQQAQKACEAVRGGMSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKW 149
BLAST of mRNA_F-serratus_M_contig69.17985.1 vs. uniprot
Match: A0A6H5JMR3_9PHAE (HTH psq-type domain-containing protein (Fragment) n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMR3_9PHAE) HSP 1 Score: 180 bits (456), Expect = 7.650e-55 Identity = 86/156 (55.13%), Postives = 121/156 (77.56%), Query Frame = 1
Query: 1 MVRLRVDAEQAKKACAAVRGG-MSVRSAAARFQVDRNAITRRLSGKVAMDGKVGPGTVMTEEEENAVEDILLFAARHFLSVGRVQLREAVRQLCNDGRKTPWEASKGPGKAWVQGFLKRYPRVSERSTHIYEANRITENDEPRIRRFYEVWREYVK 465
M R RVD EQA+KA AVR G MS+R AA + + ++ R+ KVA+D +VGPGTV+++EEE+ VED+L++A+RHFL +GR +LR+AVR +C DGRK PW+ KGPG +W++GF+ R+P +SER+THIYEANRI E+ EPR++ FY+ W EY++
Sbjct: 15 MGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYKAWAEYLE 170
BLAST of mRNA_F-serratus_M_contig69.17985.1 vs. uniprot
Match: A0A6H5JRA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA3_9PHAE) HSP 1 Score: 184 bits (467), Expect = 1.140e-53 Identity = 91/150 (60.67%), Postives = 118/150 (78.67%), Query Frame = 1
Query: 1 MVRLRVDAEQAKKACAAVRGGMSVRSAAARFQVDRNAITRRLSGKVAMDGKVGPGTVMTEEEENAVEDILLFAARHFLSVGRVQLREAVRQLCNDGRKTPWEASKGPGKAWVQGFLKRYPRVSERSTHIYEANRITENDEPRIRRFYEVW 450
M R +VD EQ +KACAA+ GMSVR AA F V R +I R GK AM+ KVGP T++++EEE+++E ILLFAAR+FL+V RV LR+AVR+LCNDGR+ PW+ KGPGK W+ GFL+R+ RV+ERST I+EAN ITE++EPR+ +FYE W
Sbjct: 1 MTRRKVDEEQVRKACAAIDDGMSVRKAAEVFGVGRTSIVDRRRGKAAMNAKVGPETILSKEEEDSLEYILLFAARNFLAVDRVYLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFLRRHLRVAERSTRIFEANMITEDEEPRMVQFYERW 150
BLAST of mRNA_F-serratus_M_contig69.17985.1 vs. uniprot
Match: A0A6H5LAK0_9PHAE (HTH psq-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAK0_9PHAE) HSP 1 Score: 176 bits (446), Expect = 4.510e-53 Identity = 83/154 (53.90%), Postives = 119/154 (77.27%), Query Frame = 1
Query: 7 RLRVDAEQAKKACAAVRGG-MSVRSAAARFQVDRNAITRRLSGKVAMDGKVGPGTVMTEEEENAVEDILLFAARHFLSVGRVQLREAVRQLCNDGRKTPWEASKGPGKAWVQGFLKRYPRVSERSTHIYEANRITENDEPRIRRFYEVWREYVK 465
R+ D EQA+KA AVR G MS+R AA + + ++ R+ KVA+D +VGPGTV+++EEE+ VED+L++A+RHFL +GR +LR+AVR +C DGRK PW+ KGPG +W++GF+ R+P +SER+THIYEANRI E+ EPR++ FY+ W EY++
Sbjct: 32 RVNQDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYKAWAEYLE 185
BLAST of mRNA_F-serratus_M_contig69.17985.1 vs. uniprot
Match: A0A6H5JPC4_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPC4_9PHAE) HSP 1 Score: 174 bits (442), Expect = 7.460e-53 Identity = 87/155 (56.13%), Postives = 115/155 (74.19%), Query Frame = 1
Query: 1 MVRLRVDAEQAKKACAAVRGG-MSVRSAAARFQVDRNAITRRLSGKVAMDGKVGPGTVMTEEEENAVEDILLFAARHFLSVGRVQLREAVRQLCNDGRKTPWEASKGPGKAWVQGFLKRYPRVSERSTHIYEANRITENDEPRIRRFYEVWREYV 462
M R RVD EQA+KA AVR G MSVR AA + + RN++ RL+ KVA+D KV PGTV+++EEE VED+L++A+R L +GR +L++AVR++C DGRK W+ KGPG W+Q FLKR+P + ER+THIYEANRI E+DE R+ FYE W Y+
Sbjct: 15 MGRTRVDPEQAQKAVDAVRSGQMSVRGAAEAYGLSRNSLHSRLTNKVAIDAKVAPGTVLSKEEEEFVEDVLVYASRRLLLLGRRELKDAVRKICLDGRKVRWDPDKGPGDRWLQWFLKRHPELPERATHIYEANRINEDDESRLEAFYETWDAYL 169 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig69.17985.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig69.17985.1 >prot_F-serratus_M_contig69.17985.1 ID=prot_F-serratus_M_contig69.17985.1|Name=mRNA_F-serratus_M_contig69.17985.1|organism=Fucus serratus male|type=polypeptide|length=155bp MVRLRVDAEQAKKACAAVRGGMSVRSAAARFQVDRNAITRRLSGKVAMDGback to top mRNA from alignment at F-serratus_M_contig69:677807..678271- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig69.17985.1 ID=mRNA_F-serratus_M_contig69.17985.1|Name=mRNA_F-serratus_M_contig69.17985.1|organism=Fucus serratus male|type=mRNA|length=465bp|location=Sequence derived from alignment at F-serratus_M_contig69:677807..678271- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig69:677807..678271- >mRNA_F-serratus_M_contig69.17985.1 ID=mRNA_F-serratus_M_contig69.17985.1|Name=mRNA_F-serratus_M_contig69.17985.1|organism=Fucus serratus male|type=CDS|length=930bp|location=Sequence derived from alignment at F-serratus_M_contig69:677807..678271- (Fucus serratus male)back to top |