mRNA_F-serratus_M_contig68.17841.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig68.17841.1
Unique NamemRNA_F-serratus_M_contig68.17841.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig68.17841.1 vs. uniprot
Match: D8LJZ0_ECTSI (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJZ0_ECTSI)

HSP 1 Score: 320 bits (820), Expect = 3.840e-105
Identity = 154/193 (79.79%), Postives = 176/193 (91.19%), Query Frame = 1
Query:    1 MGNAKSMSMGPEAAAVITKTVSNIPTPQMTETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKENPTYQEVCRGTTGHTEALRVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKDIAIASKEAEQKKHERRVNSKRIKAATHFWQAEEYHQKYLEKGGQCSSKGDTTSIRCYG 579
            MGNAKSMS+GPEAAA++TK VS +PTP + ETGIFAAGCFW VELAYQRVPGVLETEVGYTDGHK++PTYQEVC G+TGHTEALRVKFDPRVVKYNELLTVLWD+IDPTTLNRQGND GTQYRSGIYYT+ EQK+IA+ASK AEQ K ++ + ++ IK AT F++AE+YHQKYLEKGGQCS KGDT++IRCYG
Sbjct:    1 MGNAKSMSLGPEAAAIVTKAVSPMPTPAIVETGIFAAGCFWSVELAYQRVPGVLETEVGYTDGHKKDPTYQEVCSGSTGHTEALRVKFDPRVVKYNELLTVLWDKIDPTTLNRQGNDSGTQYRSGIYYTSAEQKEIALASKAAEQAKLDKPIVTE-IKEATEFYRAEDYHQKYLEKGGQCSLKGDTSNIRCYG 192          
BLAST of mRNA_F-serratus_M_contig68.17841.1 vs. uniprot
Match: A0A835YZF7_9STRA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZF7_9STRA)

HSP 1 Score: 254 bits (648), Expect = 3.180e-79
Identity = 121/193 (62.69%), Postives = 152/193 (78.76%), Query Frame = 1
Query:    1 MGNAKSMSMGPEAAAVITKTVSNIPTPQMTETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKENPTYQEVCRGTTGHTEALRVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKDIAIASKEAEQKKHERRVNSKRIKAATHFWQAEEYHQKYLEKGGQCSSKGDTTSIRCYG 579
            MGN+ + + G +AA+++TK V     P  TET  FAAGCFW +++++ RVPG+ ET VGYTDGHK NPTY+EVC G+TGHTEAL++K+DPR+V Y+ELLTVL+DR+DPTTLNRQG+D GTQYRSGIYY   +QK+ A+ +KE E +KH +      IK AT F+ AE YHQKYLEKGGQCS KGDTT+IRCYG
Sbjct:    2 MGNSPTKAFGGQAASIVTKPVPANMDPAGTETATFAAGCFWSIQISFDRVPGITETVVGYTDGHKANPTYEEVCSGSTGHTEALQIKYDPRIVSYHELLTVLYDRMDPTTLNRQGHDIGTQYRSGIYYHNDKQKEEALKAKE-EAQKHYKEPIVVEIKPATAFYPAEHYHQKYLEKGGQCSRKGDTTAIRCYG 193          
BLAST of mRNA_F-serratus_M_contig68.17841.1 vs. uniprot
Match: A0A7S2V8A8_9STRA (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8A8_9STRA)

HSP 1 Score: 248 bits (634), Expect = 3.260e-77
Identity = 118/184 (64.13%), Postives = 144/184 (78.26%), Query Frame = 1
Query:   28 GPEAAAVITKTVSNIPTPQMTETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKENPTYQEVCRGTTGHTEALRVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKDIAIASKEAEQKKHERRVNSKRIKAATHFWQAEEYHQKYLEKGGQCSSKGDTTSIRCYG 579
            GP A  +ITK VS++PT   TET  FAAGCFWGVEL++QRVPGV+ T+VGYT G K+NPTY+EVCRGTTGH EA+++ FDP +V Y+ELLTVLWDR+DPT +NRQGNDRGTQYRSGIYY + +QK  A  S    Q   ++ V ++ +  A+ FW AE+YHQ+YLEKGGQCS KGD T IRCYG
Sbjct:    5 GPSATQIITKDVSSLPTNDTTETATFAAGCFWGVELSFQRVPGVISTQVGYTAGEKDNPTYEEVCRGTTGHAEAVQLTFDPSIVSYDELLTVLWDRMDPTQVNRQGNDRGTQYRSGIYYHSEDQKIKAEESIATLQSTLDKPVATE-VLPASKFWPAEDYHQQYLEKGGQCSLKGDVTGIRCYG 187          
BLAST of mRNA_F-serratus_M_contig68.17841.1 vs. uniprot
Match: A0A7S3HR50_9STRA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HR50_9STRA)

HSP 1 Score: 221 bits (562), Expect = 3.570e-66
Identity = 109/194 (56.19%), Postives = 141/194 (72.68%), Query Frame = 1
Query:    1 MGNAKSMSMGPEAAAVITKTVS-NIPTPQMTETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKENPTYQEVCRGTTGHTEALRVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKDIAIASKEAEQKKHERRVNSKRIKAATHFWQAEEYHQKYLEKGGQCSSKGDTTSIRCYG 579
            MGN  S   G  +AA++T+ V+ N+   +   T   A GCFWG+ELA+QRVPGV++TEVGYT G K+NPTY+EVC GTTGHTEA+++ +DP  V Y++LLTV WD IDPTTLNRQG D GTQYRSGIYY   +Q  +A  S E +Q+K   ++ ++ + A T ++ AE+YHQ+YL KGGQCS  GD T IRCYG
Sbjct:   16 MGNGPSKVFGESSAAIVTRAVAPNVAGKKDVAT--LAGGCFWGIELAFQRVPGVVKTEVGYTQGIKKNPTYEEVCSGTTGHTEAVQITYDPAAVSYDDLLTVFWDLIDPTTLNRQGGDAGTQYRSGIYYHDEDQHQVAERSVEKQQQKLSDKIVTEVLPATT-WYPAEDYHQQYLSKGGQCSRTGDLTPIRCYG 206          
BLAST of mRNA_F-serratus_M_contig68.17841.1 vs. uniprot
Match: A0A4D9CT60_9STRA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CT60_9STRA)

HSP 1 Score: 209 bits (532), Expect = 8.600e-62
Identity = 109/198 (55.05%), Postives = 134/198 (67.68%), Query Frame = 1
Query:    4 GNAKSMSMGPEAAAVITKTVS----NIPTPQM--TETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKENPTYQEVCRGTTGHTEALRVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKDIAIASKEAEQKKHERRVNSKRIKAATHFWQAEEYHQKYLEKGGQCSSKGDTTSIRCYG 579
            G A     G  AA V++K  S    NI        E   FAAGCFW VEL++QRVPGV  T VGYT G   +P+Y+EVC G TGH EA+ +KFDP +V Y ELLT+LWDR DPT  +RQGNDRGTQYRS I+Y +PEQK  A A+ + EQK+    + ++ + A T F++AE YHQ+YLEKGGQC+ KGD T IRCYG
Sbjct:    4 GMATGKPFGESAAKVVSKVFSTESANIKASCSWGQEVATFAAGCFWSVELSFQRVPGVASTRVGYTGGSVPHPSYEEVCTGRTGHAEAVEIKFDPSIVTYPELLTILWDRHDPTQKDRQGNDRGTQYRSAIFYHSPEQKLQAEAAIKEEQKRRSMPIVTQLVPATT-FYEAETYHQQYLEKGGQCARKGDLTPIRCYG 200          
BLAST of mRNA_F-serratus_M_contig68.17841.1 vs. uniprot
Match: A0A4P9YUY2_9FUNG (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9YUY2_9FUNG)

HSP 1 Score: 207 bits (527), Expect = 1.480e-61
Identity = 97/165 (58.79%), Postives = 123/165 (74.55%), Query Frame = 1
Query:   85 MTETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKENPTYQEVCRGTTGHTEALRVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKDIAIASKEAEQKKHERRVNSKRIKAATHFWQAEEYHQKYLEKGGQCSSKGDTTSIRCYG 579
            MTE   FAAGCFW VELA+QR+ GV  T VGYT G + NPTY+EVC G TGH EA+ +++DP V+ YNELL   W + DPTT N+QGND GTQYRS I+Y +  Q+D A+AS+E EQ K++  + ++ I  AT FW AE+YHQ+YLEKGGQC++KG   +IRCYG
Sbjct:    1 MTEKATFAAGCFWSVELAFQRLNGVTSTRVGYTGGTRPNPTYREVCAGDTGHAEAVELEYDPAVIGYNELLAAFWAKHDPTTPNQQGNDVGTQYRSAIFYHSDAQRDAALASREQEQAKYKEAIVTE-IVPATQFWPAEDYHQRYLEKGGQCAAKGCCDAIRCYG 164          
BLAST of mRNA_F-serratus_M_contig68.17841.1 vs. uniprot
Match: A0A1R1XCD5_9FUNG (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1XCD5_9FUNG)

HSP 1 Score: 207 bits (528), Expect = 1.660e-61
Identity = 102/182 (56.04%), Postives = 134/182 (73.63%), Query Frame = 1
Query:   34 EAAAVITKTVSNIPTPQMTETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKENPTYQEVCRGTTGHTEALRVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKDIAIASKEAEQKKHERRVNSKRIKAATHFWQAEEYHQKYLEKGGQCSSKGDTTSIRCYG 579
            E A +ITK+ S  P  +  E   FAAGCFW VEL +QR+ GVL+T+VGY+ G   NPTY++VC G+TGH E++ +++DP V+ YN+LL   W++ DPTT NRQG D GTQYRS I+Y +PEQKD AI S EAEQ K++ ++ ++ I  A+ F+ AEEYHQKYLEKGGQC+ KG+   IRCYG
Sbjct:    2 EMATIITKSAS-APNSEFAE---FAAGCFWSVELMFQRLHGVLQTQVGYSGGSIPNPTYKQVCSGSTGHAESVLLEYDPAVISYNQLLNAFWEKHDPTTENRQGGDIGTQYRSAIFYHSPEQKDAAIKSLEAEQVKYKSKIVTQ-IVQASQFYPAEEYHQKYLEKGGQCALKGNKDRIRCYG 178          
BLAST of mRNA_F-serratus_M_contig68.17841.1 vs. uniprot
Match: A0A024FZG7_9STRA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZG7_9STRA)

HSP 1 Score: 207 bits (527), Expect = 1.980e-61
Identity = 101/165 (61.21%), Postives = 120/165 (72.73%), Query Frame = 1
Query:   94 TGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKENPTYQEVCRGTTGHTEALRVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKDIAIASKEAEQKKHERRVNSK---RIKAATHFWQAEEYHQKYLEKGGQCSSKGDTTSIRCYG 579
            T  FAAGCFWGVELA+QR+ G+L+T VGYT+G  ENPTYQ+VC G TGH EA+R++FD  +V Y +LL V WD  DPTTL+RQ ND GTQYRSGIYY T  Q+  A  SKE    +HE+ ++S     I+ A HFW AEE HQ YLEKGGQC+ KG  T IRCYG
Sbjct:   13 TATFAAGCFWGVELAFQRISGILQTTVGYTNGATENPTYQQVCTGQTGHAEAVRIEFDDSIVSYEDLLKVFWDIHDPTTLHRQKNDCGTQYRSGIYYHTDVQRKQAFLSKE----EHEKTLSSPIVTEIEEAGHFWPAEEIHQHYLEKGGQCADKGSKTPIRCYG 173          
BLAST of mRNA_F-serratus_M_contig68.17841.1 vs. uniprot
Match: W7TD02_9STRA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TD02_9STRA)

HSP 1 Score: 210 bits (535), Expect = 2.250e-61
Identity = 108/198 (54.55%), Postives = 132/198 (66.67%), Query Frame = 1
Query:    4 GNAKSMSMGPEAAAVITKTVSNIPTPQMT------ETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKENPTYQEVCRGTTGHTEALRVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKDIAIASKEAEQKKHERRVNSKRIKAATHFWQAEEYHQKYLEKGGQCSSKGDTTSIRCYG 579
            G A     G  AA V++K  S              E   FAAGCFW VEL++QRVPGV  T VGYT G   +P+Y+EVC G TGH EA+ +KFDP +V Y ELLTVLWDR DPT  +RQGNDRGTQYRS I+Y +PEQK  A A+ + EQK+    + ++ + A T F++AE YHQ+YLEKGGQC+ KGD T IRCYG
Sbjct:   67 GMATGKPFGESAAKVVSKVFSTESANVKASCSWGQEVATFAAGCFWSVELSFQRVPGVASTRVGYTGGSVPHPSYKEVCTGRTGHAEAVEIKFDPSIVTYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSPEQKSQAEAAIKQEQKRRSMPIVTQLVPATT-FYEAETYHQQYLEKGGQCARKGDLTPIRCYG 263          
BLAST of mRNA_F-serratus_M_contig68.17841.1 vs. uniprot
Match: A0A3M6VKW5_9STRA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKW5_9STRA)

HSP 1 Score: 206 bits (524), Expect = 5.020e-61
Identity = 102/166 (61.45%), Postives = 118/166 (71.08%), Query Frame = 1
Query:   82 QMTETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKENPTYQEVCRGTTGHTEALRVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKDIAIASKEAEQKKHERRVNSKRIKAATHFWQAEEYHQKYLEKGGQCSSKGDTTSIRCYG 579
            Q      FAAGCFWGV+LA+ RVPGVLET VGYT G   NPTY++VC G TGH EA++V FD   V Y+ LL   W   DPTTLNRQ ND+GTQYRSGIYY    Q+D A+ASKE  QK   + + ++ IK AT FW AE YHQKYLEKGGQC+ KG  T+IRCYG
Sbjct:    6 QEQNVATFAAGCFWGVQLAFDRVPGVLETTVGYTHGTVNNPTYRQVCSGQTGHAEAIKVVFDDDKVSYDALLKKFWSIHDPTTLNRQKNDQGTQYRSGIYYHNEGQRDAALASKEEHQKTLSKPIVTE-IKEATKFWDAEGYHQKYLEKGGQCADKGCDTTIRCYG 170          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig68.17841.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJZ0_ECTSI3.840e-10579.79Peptide-methionine (S)-S-oxide reductase n=1 Tax=E... [more]
A0A835YZF7_9STRA3.180e-7962.69Peptide-methionine (S)-S-oxide reductase n=1 Tax=T... [more]
A0A7S2V8A8_9STRA3.260e-7764.13Peptide-methionine (S)-S-oxide reductase n=2 Tax=F... [more]
A0A7S3HR50_9STRA3.570e-6656.19Peptide-methionine (S)-S-oxide reductase n=1 Tax=S... [more]
A0A4D9CT60_9STRA8.600e-6255.05Peptide-methionine (S)-S-oxide reductase n=1 Tax=N... [more]
A0A4P9YUY2_9FUNG1.480e-6158.79Peptide-methionine (S)-S-oxide reductase n=2 Tax=S... [more]
A0A1R1XCD5_9FUNG1.660e-6156.04Peptide-methionine (S)-S-oxide reductase n=2 Tax=S... [more]
A0A024FZG7_9STRA1.980e-6161.21Peptide-methionine (S)-S-oxide reductase n=1 Tax=A... [more]
W7TD02_9STRA2.250e-6154.55Peptide-methionine (S)-S-oxide reductase n=1 Tax=N... [more]
A0A3M6VKW5_9STRA5.020e-6161.45Peptide-methionine (S)-S-oxide reductase n=1 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig68contigF-serratus_M_contig68:863182..866872 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score206.5
Seed ortholog evalue1.2e-50
Seed eggNOG ortholog112098.XP_008611073.1
Preferred nameMSRA4
KEGG koko:K02214,ko:K07304,ko:K14442,ko:K16914
KEGG Pathwayko03018,ko04110,ko04111,ko04113,map03018,map04110,map04111,map04113
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005829,GO:0006464,GO:0006807,GO:0006950,GO:0006970,GO:0006979,GO:0008113,GO:0008150,GO:0008152,GO:0009314,GO:0009416,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009628,GO:0009651,GO:0009719,GO:0009725,GO:0009735,GO:0009941,GO:0009987,GO:0010033,GO:0016491,GO:0016667,GO:0016671,GO:0019538,GO:0031967,GO:0031975,GO:0033554,GO:0033744,GO:0034599,GO:0036211,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071704,GO:0080167,GO:1901564
EggNOG free text desc.peptide-methionine (S)-S-oxide reductase activity
EggNOG OGsCOG0225@1,KOG1635@2759
Ec32 ortholog descriptionPeptide methionine sulfoxide reductase
Ec32 orthologEc-06_007510.1
EC1.14.11.27,1.8.4.11,2.7.11.1,3.6.4.13
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03009,ko03019,ko03032,ko03036
Exons6
Model size1443
Cds size582
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932079.8273365-UTR-F-serratus_M_contig68:863181..8640421622932079.8273365-UTR-F-serratus_M_contig68:863181..864042Fucus serratus maleUTRF-serratus_M_contig68 863182..864042 -
1690964136.7704194-UTR-F-serratus_M_contig68:863181..8640421690964136.7704194-UTR-F-serratus_M_contig68:863181..864042Fucus serratus maleUTRF-serratus_M_contig68 863182..864042 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932079.854113-CDS-F-serratus_M_contig68:864042..8641081622932079.854113-CDS-F-serratus_M_contig68:864042..864108Fucus serratus maleCDSF-serratus_M_contig68 864043..864108 -
1690964136.7946913-CDS-F-serratus_M_contig68:864042..8641081690964136.7946913-CDS-F-serratus_M_contig68:864042..864108Fucus serratus maleCDSF-serratus_M_contig68 864043..864108 -
1622932079.8736663-CDS-F-serratus_M_contig68:864388..8644361622932079.8736663-CDS-F-serratus_M_contig68:864388..864436Fucus serratus maleCDSF-serratus_M_contig68 864389..864436 -
1690964136.8050275-CDS-F-serratus_M_contig68:864388..8644361690964136.8050275-CDS-F-serratus_M_contig68:864388..864436Fucus serratus maleCDSF-serratus_M_contig68 864389..864436 -
1622932079.8915708-CDS-F-serratus_M_contig68:864633..8647271622932079.8915708-CDS-F-serratus_M_contig68:864633..864727Fucus serratus maleCDSF-serratus_M_contig68 864634..864727 -
1690964136.8149514-CDS-F-serratus_M_contig68:864633..8647271690964136.8149514-CDS-F-serratus_M_contig68:864633..864727Fucus serratus maleCDSF-serratus_M_contig68 864634..864727 -
1622932079.9082577-CDS-F-serratus_M_contig68:865300..8653971622932079.9082577-CDS-F-serratus_M_contig68:865300..865397Fucus serratus maleCDSF-serratus_M_contig68 865301..865397 -
1690964136.825217-CDS-F-serratus_M_contig68:865300..8653971690964136.825217-CDS-F-serratus_M_contig68:865300..865397Fucus serratus maleCDSF-serratus_M_contig68 865301..865397 -
1622932079.9337318-CDS-F-serratus_M_contig68:866032..8661971622932079.9337318-CDS-F-serratus_M_contig68:866032..866197Fucus serratus maleCDSF-serratus_M_contig68 866033..866197 -
1690964136.8379307-CDS-F-serratus_M_contig68:866032..8661971690964136.8379307-CDS-F-serratus_M_contig68:866032..866197Fucus serratus maleCDSF-serratus_M_contig68 866033..866197 -
1622932079.956755-CDS-F-serratus_M_contig68:866760..8668721622932079.956755-CDS-F-serratus_M_contig68:866760..866872Fucus serratus maleCDSF-serratus_M_contig68 866761..866872 -
1690964136.856683-CDS-F-serratus_M_contig68:866760..8668721690964136.856683-CDS-F-serratus_M_contig68:866760..866872Fucus serratus maleCDSF-serratus_M_contig68 866761..866872 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig68.17841.1prot_F-serratus_M_contig68.17841.1Fucus serratus malepolypeptideF-serratus_M_contig68 864043..866872 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig68.17841.1

>prot_F-serratus_M_contig68.17841.1 ID=prot_F-serratus_M_contig68.17841.1|Name=mRNA_F-serratus_M_contig68.17841.1|organism=Fucus serratus male|type=polypeptide|length=194bp
MGNAKSMSMGPEAAAVITKTVSNIPTPQMTETGIFAAGCFWGVELAYQRV
PGVLETEVGYTDGHKENPTYQEVCRGTTGHTEALRVKFDPRVVKYNELLT
VLWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKDIAIASKEAEQKKHER
RVNSKRIKAATHFWQAEEYHQKYLEKGGQCSSKGDTTSIRCYG*
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mRNA from alignment at F-serratus_M_contig68:863182..866872-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig68.17841.1 ID=mRNA_F-serratus_M_contig68.17841.1|Name=mRNA_F-serratus_M_contig68.17841.1|organism=Fucus serratus male|type=mRNA|length=3691bp|location=Sequence derived from alignment at F-serratus_M_contig68:863182..866872- (Fucus serratus male)
ATGGGGAACGCGAAGTCAATGTCTATGGGCCCTGAAGCTGCCGCCGTCAT AACGAAGACAGTATCGAATATACCGACCCCGCAGATGACTGAAACGGGTA TTTTTGCTGCAGGTAGGTGGTATTTGCACTCGACATAAGACGTACGTACT CTGTAGTCGGTGCTATATGTTTACACTTGCTCCAATGAGTCACGTCTGCT GCAAGTTTTCGTTCTCATTACTCTGTACACAACTCGACTGCCCATACTCG TTTCGAAATCCCGCCGCCGCCGATCTGATACAGTCTTTTAGGGATCCCGC TCTAGATAGCCGCAAGACCACACCCTCTATTCTGATGCGCTCCGTCGCTC GAACGCAGCATTAGCCCTTAGATCTTACGTAAGTACGAGTACCGATTATA CTTCATGCAACCCCGAAGTATTTCATTCCGGAGGAAGTGTCGTGATCGTC CATCTCATTCGCCGTTTCTCTCTCTCCCGATTGATCTCACCACATATCGG TTGCGCTAATCGCATGCAGCCGCCTGCGGTTGCAATCTTACGCAATCTAC GAACCATTAGATGGTCCCGTACTTGCTAGCGGAATGAAGTGAAGTACAAA CCTTGCCCGTTGCTGATACTTTACACAACCCAAGTCAGTGTGTCAGTGGT TTCCAATCTCCACTTCAAACGTCAGGTTGCTTTTGGGGCGTTGAGCTTGC GTACCAGCGTGTACCCGGCGTACTTGAGACTGAAGTGGGCTACACCGACG GTCACAAAGAGAATCCAACGTACCAAGAAGTGTGCAGGGGCACAACGGGA CACACCGAAGCTCTCCGCGTGAAGTTCGATCCTCGTGTCGGTGAGACACA CCGTACTGTCACTGTTCTATCAATAGGAAGCTTGAAGAATGTTGGACTAA AAAGGCCTCCTGAAGCATTTGACACGTGGAGGAGTGTACTATTATACTGT ATCGTACATCTATCTATACGTGTAACGTGTTCCGTATTCCTGTCGGTGCT GGAGTACCACCGACAAGTATATGTACATGGCTTCATTAGAAGAACAGCAG TGACGCTCCCGTGGACTCGAGCGCACTTTTAGCCCCTCGACTTCCTCCGG ACTACGCTGTAAGGACGAGGAGACACCGCGGCACTTGTTGTCCACGGCTC CACTAGTTCAAACATACTGTACGGGTTGACCTTTATAGCTGGCTACTAGT TACGAGATTTGTCTGCGGAAAGGTATTGAAGAGATGAACAAGTTCACGAT TTTCTGATCTATACCAGTACAAGTAGTGTGTTGACAAATCGGCGCTAGAC AAGTTCGCCTCGGGTCTGACCTTTCCTTATTTTTCACTGCTCCCAATCGG GTCTCGCAATGGATCTGTGCGGAATCATGTGAATGACCCTTCTTAAAGTG AGGCGTCCTGTATCACCAAGTAGAATGCAACGAATTCGCTCATACAGCTT TCGCCACTTGCCTCTTCCCTTGCAGTCAAGTACAACGAGCTTTTGACTGT GCTTTGGGATCGTATCGATCCAACCACGCTCAACAGACAAGGAAATGACC GTGGCACACAGTACCGCTCGGGGTAAGTACAGCAGGCACACCGCCTACGA AGGAGGCTATCAGGTCTGTCTAGCCACGCACCGCAGAAAGTGCCCTGGTA TATATTTCCTTGAAATACATTAATATTAATGTTAATAACTTGGTTTTCGT TTTGTCTGCCCACAACACACGCCACGCGAAGAGATCATAGCTTTCGCAGC AAACACCGTGGTCGACGCCGCGATGTCGTTCTACAAATGTCGAGGCACCG TTTATCGAGAGGGGTTTCAGTGCCAAGTTGGAGCTTTATTTTATAGATGG ACTGTTCTCTCGCTTTCCACCCGCGATGTCGTTCTACAAATGTCGAGGCA CCGTTTATCGAGAGGGGTTTCAGTGCCAAGTTGGAGCTTTATTTTATAGA TGGACTGTTCTCTCGCTTTCCACCTATGATGCTTTGGTATCTTGGACTCA AAACGATTTGGCATAATCGAGAGGGGTTTCAGTGCCAAGTGGCAAAACTC TTCTGTCGAGGCACCGTTTATCCACCAAGTGAGCTGCCTTTGGTATCTTG GACTCAAAACGATTGGTTCCGGTGGCAAAACTCCCCTGAGCTCAGGATCT ACTACACCACGCCAGAGCAGAAAGACATCGCGATCGCTTCGAAGGAAGCA GAGCAAAAGAAGCATGAAAGGCGAGTCAACTCAAAACGAGTTGTCCACAC ACTTTAAAAAGGAATTTGCCTCGCCCGTTTCGCTTCACTTTTTACATGTA TAAAGCGCGCGATTCACGATAAGCGTAGAAACTCCAGATGTCCACTTTCG CTGAATGGCGTGTACGTCCAACTGCATAACCTGCCCCCTGGTCGAACTCT GGTCATGTTCGCTGGCGCAGGCCGATCGTGACGGAGATAAAAGCGGCCAC GCATTTCTGGCAAGCAGAAGAATACCATCAAAAGGTGATTTAACTCTCCT CCTAGAGGACCTGCGCTGTCTTCGATCATTTCGCCTCGTCCTTTCCCCGG CTGGAGTAGCTGGACCTCGCCGGGTTTCTGATTTTCATAAGTTGTTTTGT ACATTATTACGATGATGCCGTAAGGTACTGCGAAGTCAAGCAGGCTTTTG AAATGAGCGCGTCGACTTTCCGTCAAGTTCAATGACAACGCTCCGTCTTT ACCATATCGTCCTAATAGCAATACGCCCCCTCGCCACGTGCCCCACCTGG CGCTGCTTCACCAGTACCTGGAAAAGGGCGGACAGTGCTCAAGCAAGGGA GATACGACCAGCATTCGATGCTACGGCTAGCGAGGCGATTGCCGCGGAAG CCAGATCGTCTCGAGTTCCTCGAATCAAAAGGACGGCTTTCGCTCGCCAG GGTGGGCTGGCTGCGCTGTGGAATTGGGTGGAGAAGTCGCTGTAGCTCGG GACAGGTTTCTCGGGACGGGAGTTGACGAGAGGCCGTTAGCGAATTGTTT ATATGACCGTGTCGAATAGAATCTGAACCGCTTTGTGCAGTAGAAGGAAC AGTAGAAGGAACAGGTTATCTTGTCGTTCGTACGTTCCCAAGCCCTCTTT GTGCTGAGTAAGGGAGGAGAAGTGAAAAACTGAATCAAACCGAAAAAGAG GGACTAGTATAATAGCTCAACTATTAATACGTCCCCAGGGTAATCGTTAG TTTGATCGTTTGATCGTTTGCCCGAGGGCCACCAGCTCGTCCTCTCCCAC CACGTGGAGGAGCTGGGAGGAGCATCTATCTTTATTTATACTTTTTTGGA AGAGTAAGTACTCAATGTGGACCTTTGCCTTGCTTTTATATTTCTTAGTT CCGTGAAGGATAATTATTTCTGACACGAAGAAATTTGGGCGAACGCCTTT TTGCCTAGATTGTGTGCGAGTGTGTGAGGTTTCAAACGCATTGAAAAAAG TTCGTTCCAATGCATGGAATGCTTCCAACCCGAGGAGATCACGTCTCGTG GGGAAAATCTTCCCGCAGAGGAGGTCCATGGCGAAAGCGCAATATAACAC CACCAATTGCTACTATAATATTAATATTGTTGATAGTCGCCCCGCGGCCT GAGAGTTGGCACGAGAGCTGTGGGAGCTGTGGTTACGGCCCTAGTGACGA ACAGGTTTCCGCAACAGCTTCATTTTTTCGTCAGCTTGTCC
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Coding sequence (CDS) from alignment at F-serratus_M_contig68:863182..866872-

>mRNA_F-serratus_M_contig68.17841.1 ID=mRNA_F-serratus_M_contig68.17841.1|Name=mRNA_F-serratus_M_contig68.17841.1|organism=Fucus serratus male|type=CDS|length=1164bp|location=Sequence derived from alignment at F-serratus_M_contig68:863182..866872- (Fucus serratus male)
ATGGGGAACGCGAAGTCAATGTCTATGGGCCCTGAAGCTGCCGCCGTCAT
AACGAAGACAGTATCGAATATACCGACCCCGCAGATGACTGAAACGGGTA
TTTTTGCTGCAGATGGGGAACGCGAAGTCAATGTCTATGGGCCCTGAAGC
TGCCGCCGTCATAACGAAGACAGTATCGAATATACCGACCCCGCAGATGA
CTGAAACGGGTATTTTTGCTGCAGGTTGCTTTTGGGGCGTTGAGCTTGCG
TACCAGCGTGTACCCGGCGTACTTGAGACTGAAGTGGGCTACACCGACGG
TCACAAAGAGAATCCAACGTACCAAGAAGTGTGCAGGGGCACAACGGGAC
ACACCGAAGCTCTCCGCGTGAAGTTCGATCCTCGTGTCGGTTGCTTTTGG
GGCGTTGAGCTTGCGTACCAGCGTGTACCCGGCGTACTTGAGACTGAAGT
GGGCTACACCGACGGTCACAAAGAGAATCCAACGTACCAAGAAGTGTGCA
GGGGCACAACGGGACACACCGAAGCTCTCCGCGTGAAGTTCGATCCTCGT
GTCGTCAAGTACAACGAGCTTTTGACTGTGCTTTGGGATCGTATCGATCC
AACCACGCTCAACAGACAAGGAAATGACCGTGGCACACAGTACCGCTCGG
GTCAAGTACAACGAGCTTTTGACTGTGCTTTGGGATCGTATCGATCCAAC
CACGCTCAACAGACAAGGAAATGACCGTGGCACACAGTACCGCTCGGGGA
TCTACTACACCACGCCAGAGCAGAAAGACATCGCGATCGCTTCGAAGGAA
GCAGAGCAAAAGAAGCATGAAAGGCGAGTCAACTCAAAACGAGATCTACT
ACACCACGCCAGAGCAGAAAGACATCGCGATCGCTTCGAAGGAAGCAGAG
CAAAAGAAGCATGAAAGGCGAGTCAACTCAAAACGAATAAAAGCGGCCAC
GCATTTCTGGCAAGCAGAAGAATACCATCAAAAGATAAAAGCGGCCACGC
ATTTCTGGCAAGCAGAAGAATACCATCAAAAGTACCTGGAAAAGGGCGGA
CAGTGCTCAAGCAAGGGAGATACGACCAGCATTCGATGCTACGGCTAGTA
CCTGGAAAAGGGCGGACAGTGCTCAAGCAAGGGAGATACGACCAGCATTC
GATGCTACGGCTAG
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