mRNA_F-serratus_M_contig68.17841.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig68.17841.1 vs. uniprot
Match: D8LJZ0_ECTSI (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJZ0_ECTSI) HSP 1 Score: 320 bits (820), Expect = 3.840e-105 Identity = 154/193 (79.79%), Postives = 176/193 (91.19%), Query Frame = 1
Query: 1 MGNAKSMSMGPEAAAVITKTVSNIPTPQMTETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKENPTYQEVCRGTTGHTEALRVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKDIAIASKEAEQKKHERRVNSKRIKAATHFWQAEEYHQKYLEKGGQCSSKGDTTSIRCYG 579
MGNAKSMS+GPEAAA++TK VS +PTP + ETGIFAAGCFW VELAYQRVPGVLETEVGYTDGHK++PTYQEVC G+TGHTEALRVKFDPRVVKYNELLTVLWD+IDPTTLNRQGND GTQYRSGIYYT+ EQK+IA+ASK AEQ K ++ + ++ IK AT F++AE+YHQKYLEKGGQCS KGDT++IRCYG
Sbjct: 1 MGNAKSMSLGPEAAAIVTKAVSPMPTPAIVETGIFAAGCFWSVELAYQRVPGVLETEVGYTDGHKKDPTYQEVCSGSTGHTEALRVKFDPRVVKYNELLTVLWDKIDPTTLNRQGNDSGTQYRSGIYYTSAEQKEIALASKAAEQAKLDKPIVTE-IKEATEFYRAEDYHQKYLEKGGQCSLKGDTSNIRCYG 192
BLAST of mRNA_F-serratus_M_contig68.17841.1 vs. uniprot
Match: A0A835YZF7_9STRA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZF7_9STRA) HSP 1 Score: 254 bits (648), Expect = 3.180e-79 Identity = 121/193 (62.69%), Postives = 152/193 (78.76%), Query Frame = 1
Query: 1 MGNAKSMSMGPEAAAVITKTVSNIPTPQMTETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKENPTYQEVCRGTTGHTEALRVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKDIAIASKEAEQKKHERRVNSKRIKAATHFWQAEEYHQKYLEKGGQCSSKGDTTSIRCYG 579
MGN+ + + G +AA+++TK V P TET FAAGCFW +++++ RVPG+ ET VGYTDGHK NPTY+EVC G+TGHTEAL++K+DPR+V Y+ELLTVL+DR+DPTTLNRQG+D GTQYRSGIYY +QK+ A+ +KE E +KH + IK AT F+ AE YHQKYLEKGGQCS KGDTT+IRCYG
Sbjct: 2 MGNSPTKAFGGQAASIVTKPVPANMDPAGTETATFAAGCFWSIQISFDRVPGITETVVGYTDGHKANPTYEEVCSGSTGHTEALQIKYDPRIVSYHELLTVLYDRMDPTTLNRQGHDIGTQYRSGIYYHNDKQKEEALKAKE-EAQKHYKEPIVVEIKPATAFYPAEHYHQKYLEKGGQCSRKGDTTAIRCYG 193
BLAST of mRNA_F-serratus_M_contig68.17841.1 vs. uniprot
Match: A0A7S2V8A8_9STRA (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8A8_9STRA) HSP 1 Score: 248 bits (634), Expect = 3.260e-77 Identity = 118/184 (64.13%), Postives = 144/184 (78.26%), Query Frame = 1
Query: 28 GPEAAAVITKTVSNIPTPQMTETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKENPTYQEVCRGTTGHTEALRVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKDIAIASKEAEQKKHERRVNSKRIKAATHFWQAEEYHQKYLEKGGQCSSKGDTTSIRCYG 579
GP A +ITK VS++PT TET FAAGCFWGVEL++QRVPGV+ T+VGYT G K+NPTY+EVCRGTTGH EA+++ FDP +V Y+ELLTVLWDR+DPT +NRQGNDRGTQYRSGIYY + +QK A S Q ++ V ++ + A+ FW AE+YHQ+YLEKGGQCS KGD T IRCYG
Sbjct: 5 GPSATQIITKDVSSLPTNDTTETATFAAGCFWGVELSFQRVPGVISTQVGYTAGEKDNPTYEEVCRGTTGHAEAVQLTFDPSIVSYDELLTVLWDRMDPTQVNRQGNDRGTQYRSGIYYHSEDQKIKAEESIATLQSTLDKPVATE-VLPASKFWPAEDYHQQYLEKGGQCSLKGDVTGIRCYG 187
BLAST of mRNA_F-serratus_M_contig68.17841.1 vs. uniprot
Match: A0A7S3HR50_9STRA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HR50_9STRA) HSP 1 Score: 221 bits (562), Expect = 3.570e-66 Identity = 109/194 (56.19%), Postives = 141/194 (72.68%), Query Frame = 1
Query: 1 MGNAKSMSMGPEAAAVITKTVS-NIPTPQMTETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKENPTYQEVCRGTTGHTEALRVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKDIAIASKEAEQKKHERRVNSKRIKAATHFWQAEEYHQKYLEKGGQCSSKGDTTSIRCYG 579
MGN S G +AA++T+ V+ N+ + T A GCFWG+ELA+QRVPGV++TEVGYT G K+NPTY+EVC GTTGHTEA+++ +DP V Y++LLTV WD IDPTTLNRQG D GTQYRSGIYY +Q +A S E +Q+K ++ ++ + A T ++ AE+YHQ+YL KGGQCS GD T IRCYG
Sbjct: 16 MGNGPSKVFGESSAAIVTRAVAPNVAGKKDVAT--LAGGCFWGIELAFQRVPGVVKTEVGYTQGIKKNPTYEEVCSGTTGHTEAVQITYDPAAVSYDDLLTVFWDLIDPTTLNRQGGDAGTQYRSGIYYHDEDQHQVAERSVEKQQQKLSDKIVTEVLPATT-WYPAEDYHQQYLSKGGQCSRTGDLTPIRCYG 206
BLAST of mRNA_F-serratus_M_contig68.17841.1 vs. uniprot
Match: A0A4D9CT60_9STRA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CT60_9STRA) HSP 1 Score: 209 bits (532), Expect = 8.600e-62 Identity = 109/198 (55.05%), Postives = 134/198 (67.68%), Query Frame = 1
Query: 4 GNAKSMSMGPEAAAVITKTVS----NIPTPQM--TETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKENPTYQEVCRGTTGHTEALRVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKDIAIASKEAEQKKHERRVNSKRIKAATHFWQAEEYHQKYLEKGGQCSSKGDTTSIRCYG 579
G A G AA V++K S NI E FAAGCFW VEL++QRVPGV T VGYT G +P+Y+EVC G TGH EA+ +KFDP +V Y ELLT+LWDR DPT +RQGNDRGTQYRS I+Y +PEQK A A+ + EQK+ + ++ + A T F++AE YHQ+YLEKGGQC+ KGD T IRCYG
Sbjct: 4 GMATGKPFGESAAKVVSKVFSTESANIKASCSWGQEVATFAAGCFWSVELSFQRVPGVASTRVGYTGGSVPHPSYEEVCTGRTGHAEAVEIKFDPSIVTYPELLTILWDRHDPTQKDRQGNDRGTQYRSAIFYHSPEQKLQAEAAIKEEQKRRSMPIVTQLVPATT-FYEAETYHQQYLEKGGQCARKGDLTPIRCYG 200
BLAST of mRNA_F-serratus_M_contig68.17841.1 vs. uniprot
Match: A0A4P9YUY2_9FUNG (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9YUY2_9FUNG) HSP 1 Score: 207 bits (527), Expect = 1.480e-61 Identity = 97/165 (58.79%), Postives = 123/165 (74.55%), Query Frame = 1
Query: 85 MTETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKENPTYQEVCRGTTGHTEALRVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKDIAIASKEAEQKKHERRVNSKRIKAATHFWQAEEYHQKYLEKGGQCSSKGDTTSIRCYG 579
MTE FAAGCFW VELA+QR+ GV T VGYT G + NPTY+EVC G TGH EA+ +++DP V+ YNELL W + DPTT N+QGND GTQYRS I+Y + Q+D A+AS+E EQ K++ + ++ I AT FW AE+YHQ+YLEKGGQC++KG +IRCYG
Sbjct: 1 MTEKATFAAGCFWSVELAFQRLNGVTSTRVGYTGGTRPNPTYREVCAGDTGHAEAVELEYDPAVIGYNELLAAFWAKHDPTTPNQQGNDVGTQYRSAIFYHSDAQRDAALASREQEQAKYKEAIVTE-IVPATQFWPAEDYHQRYLEKGGQCAAKGCCDAIRCYG 164
BLAST of mRNA_F-serratus_M_contig68.17841.1 vs. uniprot
Match: A0A1R1XCD5_9FUNG (Peptide-methionine (S)-S-oxide reductase n=2 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1XCD5_9FUNG) HSP 1 Score: 207 bits (528), Expect = 1.660e-61 Identity = 102/182 (56.04%), Postives = 134/182 (73.63%), Query Frame = 1
Query: 34 EAAAVITKTVSNIPTPQMTETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKENPTYQEVCRGTTGHTEALRVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKDIAIASKEAEQKKHERRVNSKRIKAATHFWQAEEYHQKYLEKGGQCSSKGDTTSIRCYG 579
E A +ITK+ S P + E FAAGCFW VEL +QR+ GVL+T+VGY+ G NPTY++VC G+TGH E++ +++DP V+ YN+LL W++ DPTT NRQG D GTQYRS I+Y +PEQKD AI S EAEQ K++ ++ ++ I A+ F+ AEEYHQKYLEKGGQC+ KG+ IRCYG
Sbjct: 2 EMATIITKSAS-APNSEFAE---FAAGCFWSVELMFQRLHGVLQTQVGYSGGSIPNPTYKQVCSGSTGHAESVLLEYDPAVISYNQLLNAFWEKHDPTTENRQGGDIGTQYRSAIFYHSPEQKDAAIKSLEAEQVKYKSKIVTQ-IVQASQFYPAEEYHQKYLEKGGQCALKGNKDRIRCYG 178
BLAST of mRNA_F-serratus_M_contig68.17841.1 vs. uniprot
Match: A0A024FZG7_9STRA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FZG7_9STRA) HSP 1 Score: 207 bits (527), Expect = 1.980e-61 Identity = 101/165 (61.21%), Postives = 120/165 (72.73%), Query Frame = 1
Query: 94 TGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKENPTYQEVCRGTTGHTEALRVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKDIAIASKEAEQKKHERRVNSK---RIKAATHFWQAEEYHQKYLEKGGQCSSKGDTTSIRCYG 579
T FAAGCFWGVELA+QR+ G+L+T VGYT+G ENPTYQ+VC G TGH EA+R++FD +V Y +LL V WD DPTTL+RQ ND GTQYRSGIYY T Q+ A SKE +HE+ ++S I+ A HFW AEE HQ YLEKGGQC+ KG T IRCYG
Sbjct: 13 TATFAAGCFWGVELAFQRISGILQTTVGYTNGATENPTYQQVCTGQTGHAEAVRIEFDDSIVSYEDLLKVFWDIHDPTTLHRQKNDCGTQYRSGIYYHTDVQRKQAFLSKE----EHEKTLSSPIVTEIEEAGHFWPAEEIHQHYLEKGGQCADKGSKTPIRCYG 173
BLAST of mRNA_F-serratus_M_contig68.17841.1 vs. uniprot
Match: W7TD02_9STRA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TD02_9STRA) HSP 1 Score: 210 bits (535), Expect = 2.250e-61 Identity = 108/198 (54.55%), Postives = 132/198 (66.67%), Query Frame = 1
Query: 4 GNAKSMSMGPEAAAVITKTVSNIPTPQMT------ETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKENPTYQEVCRGTTGHTEALRVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKDIAIASKEAEQKKHERRVNSKRIKAATHFWQAEEYHQKYLEKGGQCSSKGDTTSIRCYG 579
G A G AA V++K S E FAAGCFW VEL++QRVPGV T VGYT G +P+Y+EVC G TGH EA+ +KFDP +V Y ELLTVLWDR DPT +RQGNDRGTQYRS I+Y +PEQK A A+ + EQK+ + ++ + A T F++AE YHQ+YLEKGGQC+ KGD T IRCYG
Sbjct: 67 GMATGKPFGESAAKVVSKVFSTESANVKASCSWGQEVATFAAGCFWSVELSFQRVPGVASTRVGYTGGSVPHPSYKEVCTGRTGHAEAVEIKFDPSIVTYPELLTVLWDRHDPTQKDRQGNDRGTQYRSAIFYHSPEQKSQAEAAIKQEQKRRSMPIVTQLVPATT-FYEAETYHQQYLEKGGQCARKGDLTPIRCYG 263
BLAST of mRNA_F-serratus_M_contig68.17841.1 vs. uniprot
Match: A0A3M6VKW5_9STRA (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKW5_9STRA) HSP 1 Score: 206 bits (524), Expect = 5.020e-61 Identity = 102/166 (61.45%), Postives = 118/166 (71.08%), Query Frame = 1
Query: 82 QMTETGIFAAGCFWGVELAYQRVPGVLETEVGYTDGHKENPTYQEVCRGTTGHTEALRVKFDPRVVKYNELLTVLWDRIDPTTLNRQGNDRGTQYRSGIYYTTPEQKDIAIASKEAEQKKHERRVNSKRIKAATHFWQAEEYHQKYLEKGGQCSSKGDTTSIRCYG 579
Q FAAGCFWGV+LA+ RVPGVLET VGYT G NPTY++VC G TGH EA++V FD V Y+ LL W DPTTLNRQ ND+GTQYRSGIYY Q+D A+ASKE QK + + ++ IK AT FW AE YHQKYLEKGGQC+ KG T+IRCYG
Sbjct: 6 QEQNVATFAAGCFWGVQLAFDRVPGVLETTVGYTHGTVNNPTYRQVCSGQTGHAEAIKVVFDDDKVSYDALLKKFWSIHDPTTLNRQKNDQGTQYRSGIYYHNEGQRDAALASKEEHQKTLSKPIVTE-IKEATKFWDAEGYHQKYLEKGGQCADKGCDTTIRCYG 170 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig68.17841.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig68.17841.1 >prot_F-serratus_M_contig68.17841.1 ID=prot_F-serratus_M_contig68.17841.1|Name=mRNA_F-serratus_M_contig68.17841.1|organism=Fucus serratus male|type=polypeptide|length=194bp MGNAKSMSMGPEAAAVITKTVSNIPTPQMTETGIFAAGCFWGVELAYQRVback to top mRNA from alignment at F-serratus_M_contig68:863182..866872- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig68.17841.1 ID=mRNA_F-serratus_M_contig68.17841.1|Name=mRNA_F-serratus_M_contig68.17841.1|organism=Fucus serratus male|type=mRNA|length=3691bp|location=Sequence derived from alignment at F-serratus_M_contig68:863182..866872- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig68:863182..866872- >mRNA_F-serratus_M_contig68.17841.1 ID=mRNA_F-serratus_M_contig68.17841.1|Name=mRNA_F-serratus_M_contig68.17841.1|organism=Fucus serratus male|type=CDS|length=1164bp|location=Sequence derived from alignment at F-serratus_M_contig68:863182..866872- (Fucus serratus male)back to top |