prot_F-serratus_M_contig67.17718.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig67.17718.1
Unique Nameprot_F-serratus_M_contig67.17718.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length292
Homology
BLAST of mRNA_F-serratus_M_contig67.17718.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 195 bits (495), Expect = 1.750e-55
Identity = 118/293 (40.27%), Postives = 168/293 (57.34%), Query Frame = 0
Query:    1 MTAIGFEQAKADPFVSRKVVDGGAEMVAVVHVDGILAHAKDQATMDRFAAELGQNFRLKDTRDAEYYMGCHITRNRKARELKFVQRLYVESLVMKFDVKKKTKIPAASGVPTLSKADEPRNPEEKEEMRKFPYREAVGVLMWTATMTRSDIACAVRAVARFCENPGPAHKNAVMKIFQYFLHTKEWRIMYG-GQGCGLCMEAYTDSNFGACLNTRRSVSGAVSMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVEDVLLLRQVQEFMEPSMRVGAINMFEDDEGAIKLATN 292
            + A+GFEQ  AD  V R + DG   ++ VVHVD I A   ++   D+F A+L ++  +K+  +  +Y GC   RN++   L   Q+ + + L  ++ V     +P +SGV  LS  D        E   +FP+RE VG LMW AT TR DIA AVRAVAR+C +P   H NA M I  Y   T  + I +  G   G  ++ Y D++F +    RRSVSG +     GA+SW SR Q+     T+EAEYVAL +VV+++L LRQ+  FM P + +  I +FED++GAI+LA N
Sbjct:  117 LVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFDA------DEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQN 401          
BLAST of mRNA_F-serratus_M_contig67.17718.1 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE)

HSP 1 Score: 195 bits (495), Expect = 1.320e-52
Identity = 118/293 (40.27%), Postives = 168/293 (57.34%), Query Frame = 0
Query:    1 MTAIGFEQAKADPFVSRKVVDGGAEMVAVVHVDGILAHAKDQATMDRFAAELGQNFRLKDTRDAEYYMGCHITRNRKARELKFVQRLYVESLVMKFDVKKKTKIPAASGVPTLSKADEPRNPEEKEEMRKFPYREAVGVLMWTATMTRSDIACAVRAVARFCENPGPAHKNAVMKIFQYFLHTKEWRIMYG-GQGCGLCMEAYTDSNFGACLNTRRSVSGAVSMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVEDVLLLRQVQEFMEPSMRVGAINMFEDDEGAIKLATN 292
            + A+GFEQ  AD  V R + DG   ++ VVHVD I A   ++   D+F A+L ++  +K+  +  +Y GC   RN++   L   Q+ + + L  ++ V     +P +SGV  LS  D        E   +FP+RE VG LMW AT TR DIA AVRAVAR+C +P   H NA M I  Y   T  + I +  G   G  ++ Y D++F +    RRSVSG +     GA+SW SR Q+     T+EAEYVAL +VV+++L LRQ+  FM P + +  I +FED++GAI+LA N
Sbjct: 1453 LVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFDA------DEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQN 1737          
BLAST of mRNA_F-serratus_M_contig67.17718.1 vs. uniprot
Match: A0A6H5L867_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L867_9PHAE)

HSP 1 Score: 195 bits (495), Expect = 1.320e-52
Identity = 118/293 (40.27%), Postives = 168/293 (57.34%), Query Frame = 0
Query:    1 MTAIGFEQAKADPFVSRKVVDGGAEMVAVVHVDGILAHAKDQATMDRFAAELGQNFRLKDTRDAEYYMGCHITRNRKARELKFVQRLYVESLVMKFDVKKKTKIPAASGVPTLSKADEPRNPEEKEEMRKFPYREAVGVLMWTATMTRSDIACAVRAVARFCENPGPAHKNAVMKIFQYFLHTKEWRIMYG-GQGCGLCMEAYTDSNFGACLNTRRSVSGAVSMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVEDVLLLRQVQEFMEPSMRVGAINMFEDDEGAIKLATN 292
            + A+GFEQ  AD  V R + DG   ++ VVHVD I A   ++   D+F A+L ++  +K+  +  +Y GC   RN++   L   Q+ + + L  ++ V     +P +SGV  LS  D        E   +FP+RE VG LMW AT TR DIA AVRAVAR+C +P   H NA M I  Y   T  + I +  G   G  ++ Y D++F +    RRSVSG +     GA+SW SR Q+     T+EAEYVAL +VV+++L LRQ+  FM P + +  I +FED++GAI+LA N
Sbjct: 1239 LVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFDA------DEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQN 1523          
BLAST of mRNA_F-serratus_M_contig67.17718.1 vs. uniprot
Match: A0A6H5KBD4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD4_9PHAE)

HSP 1 Score: 195 bits (495), Expect = 1.380e-52
Identity = 118/293 (40.27%), Postives = 168/293 (57.34%), Query Frame = 0
Query:    1 MTAIGFEQAKADPFVSRKVVDGGAEMVAVVHVDGILAHAKDQATMDRFAAELGQNFRLKDTRDAEYYMGCHITRNRKARELKFVQRLYVESLVMKFDVKKKTKIPAASGVPTLSKADEPRNPEEKEEMRKFPYREAVGVLMWTATMTRSDIACAVRAVARFCENPGPAHKNAVMKIFQYFLHTKEWRIMYG-GQGCGLCMEAYTDSNFGACLNTRRSVSGAVSMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVEDVLLLRQVQEFMEPSMRVGAINMFEDDEGAIKLATN 292
            + A+GFEQ  AD  V R + DG   ++ VVHVD I A   ++   D+F A+L ++  +K+  +  +Y GC   RN++   L   Q+ + + L  ++ V     +P +SGV  LS  D        E   +FP+RE VG LMW AT TR DIA AVRAVAR+C +P   H NA M I  Y   T  + I +  G   G  ++ Y D++F +    RRSVSG +     GA+SW SR Q+     T+EAEYVAL +VV+++L LRQ+  FM P + +  I +FED++GAI+LA N
Sbjct: 1307 LVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFDA------DEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQN 1591          
BLAST of mRNA_F-serratus_M_contig67.17718.1 vs. uniprot
Match: A0A6H5JG40_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG40_9PHAE)

HSP 1 Score: 194 bits (493), Expect = 2.300e-52
Identity = 118/293 (40.27%), Postives = 167/293 (57.00%), Query Frame = 0
Query:    1 MTAIGFEQAKADPFVSRKVVDGGAEMVAVVHVDGILAHAKDQATMDRFAAELGQNFRLKDTRDAEYYMGCHITRNRKARELKFVQRLYVESLVMKFDVKKKTKIPAASGVPTLSKADEPRNPEEKEEMRKFPYREAVGVLMWTATMTRSDIACAVRAVARFCENPGPAHKNAVMKIFQYFLHTKEWRIMYG-GQGCGLCMEAYTDSNFGACLNTRRSVSGAVSMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVEDVLLLRQVQEFMEPSMRVGAINMFEDDEGAIKLATN 292
            + A+GFEQ  AD  V R + DG   ++ VVHVD I A   ++   D+F A+L ++  +K+  +  +Y GC   RN++   L   Q+ + + L  ++ V     +P +SGV  LS  D        E    FP+RE VG LMW AT TR DIA AVRAVAR+C +P   H NA M I  Y   T  + I +  G   G  ++ Y D++F +    RRSVSG +     GA+SW SR Q+     T+EAEYVAL +VV+++L LRQ+  FM P + +  I +FED++GAI+LA N
Sbjct:  947 LVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGV-KLSDFDA------DEVATDFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQN 1231          
BLAST of mRNA_F-serratus_M_contig67.17718.1 vs. uniprot
Match: A0A6H5KTL3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTL3_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 6.580e-47
Identity = 106/288 (36.81%), Postives = 161/288 (55.90%), Query Frame = 0
Query:    5 GFEQAKADPFVSRKVVDGGAEMVAVVHVDGILAHAKDQATMDRFAAELGQNFRLKDTRDAEYYMGCHITRNRKARELKFVQRLYVESLVMKFDVKKKTKIPAASGVPTLSKADEPRNPEEKEEMRKFPYREAVGVLMWTATMTRSDIACAVRAVARFCENPGPAHKNAVMKIFQYFLHTKEWRIMYGGQGCGLCMEAYTDSNFGACLNTRRSVSGAVSMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVEDVLLLRQVQEFMEPSMRVGAINMFEDDEGAIKLATN 292
            GFEQ KADP V RK+VD    M+ V++VD IL    D+   +   A L + F  K+  + +++ GC I R+ +A  L+  Q  Y++S+V +FDVK  ++IPA  G     K ++       EE  ++P REA+G +MW +T +R D++ AVRAVAR    P   H +A+ KI  Y   T++  I Y  +G GL +  Y D+++ A    RRSVSG  + +    +S  S+ Q + +  ++EAEY+A  E VE+ L LR    F+ P     +I + ED++G I L  N
Sbjct:  194 GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVEEALFLRAELSFVAPETSGSSIQVLEDNQGVIALVQN 471          
BLAST of mRNA_F-serratus_M_contig67.17718.1 vs. uniprot
Match: A0A6H5JPC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPC7_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 1.330e-44
Identity = 99/253 (39.13%), Postives = 144/253 (56.92%), Query Frame = 0
Query:   41 DQATMDRFAAELGQNFRLKDTRDAEYYMGCHITRNRKARELKFVQRLYVESLVMKFDVKKKTKIPAASGVPTLSKADEPRNPEEKEEMRKFPYREAVGVLMWTATMTRSDIACAVRAVARFCENPGPAHKNAVMKIFQYFLHTKEWRIMYG-GQGCGLCMEAYTDSNFGACLNTRRSVSGAVSMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVEDVLLLRQVQEFMEPSMRVGAINMFEDDEGAIKLATN 292
            ++ T D+F A+L ++  +K+  +  +Y GC   RN++   L   Q+ + + L   + V     +P +SGV  LS  D        E   +FP+RE VG LMW AT TR DIA AVRAVAR+C +P   H NA M I  +   T  +   +  G   G  ++ Y D++F +    RRSVSG +     GA+SW SR Q+     T+EAEYVAL +VV+++L LRQ+  FM P + +  I +FED++GAI+LA N
Sbjct:   77 ERETCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAGYGVVGGKSVPMSSGV-KLSDFDA------DEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPTLVHWNAAMGILGFARRTSHFGTSFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQN 322          
BLAST of mRNA_F-serratus_M_contig67.17718.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 4.250e-44
Identity = 105/290 (36.21%), Postives = 158/290 (54.48%), Query Frame = 0
Query:    4 IGFEQAKADPFVSRKVVDGGAEMVAVVHVDGILAHAKDQATMDRFAAELGQNFRLKDTRDAEYYMGCHITRNRKARELKFVQRLYVESLVMKFDVKKKTKIPAASGVPTLSKADEPRNPEEKEEMRKFPYREAVGVLMWTATMTRSDIACAVRAVARFCENPGPAHKNAVMKIFQYFLHTKEWRIMYG-GQGCGLCMEAYTDSNFGACLNTRRSVSGAVSMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVEDVLLLRQVQEFMEPSMRVGAINMFEDDEGAIKLATN 292
            +GF Q  AD  V R + +G   M+ VVHVD I A  + +   D+F  +L +   +K+  +  +Y  C   R+ +   L+  Q+ + E L  ++ ++    +P    V  L+  DE       E     P+RE VG LMW AT TR DIA AVRAVAR+C +P   H  A + I  Y   T    I +  G   G+ M+ + D+++ +    RRSVSG + M   G ++W SR Q+     T+EAEYVA+++V+++VL LRQV  FM P   +  I +FED++GAI++A N
Sbjct:   96 LGFLQCLADACVFRLMEEGRVIMIIVVHVDDIFAVGQKERC-DKFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSV-KLTDFDE------NEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHN 377          
BLAST of mRNA_F-serratus_M_contig67.17718.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 4.430e-44
Identity = 104/290 (35.86%), Postives = 157/290 (54.14%), Query Frame = 0
Query:    4 IGFEQAKADPFVSRKVVDGGAEMVAVVHVDGILAHAKDQATMDRFAAELGQNFRLKDTRDAEYYMGCHITRNRKARELKFVQRLYVESLVMKFDVKKKTKIPAASGVPTLSKADEPRNPEEKEEMRKFPYREAVGVLMWTATMTRSDIACAVRAVARFCENPGPAHKNAVMKIFQYFLHTKEWRIMYG-GQGCGLCMEAYTDSNFGACLNTRRSVSGAVSMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVEDVLLLRQVQEFMEPSMRVGAINMFEDDEGAIKLATN 292
            +GF Q  AD  V R + +G   M+ VVHVD I A  + +   D+F  +L +   +K+  +  +Y  C   R+ +   L+  Q+ + E L  ++ ++    +P    V  L+  DE       E     P+RE VG LMW AT TR DIA AVRAVAR+C +P   H  A + I  Y   T    I +  G   G+ M+ + D+++ +    RRSVSG + M   G ++W SR Q+     T+EAEYVA+++V+++VL LRQV  FM P   +  I +FED++GAI++  N
Sbjct:   34 LGFLQCLADACVFRLMEEGRVIMIIVVHVDDIFAVGQKERC-DKFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSV-KLTDFDE------NEASADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHN 315          
BLAST of mRNA_F-serratus_M_contig67.17718.1 vs. uniprot
Match: A0A6A3V8M8_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3V8M8_9STRA)

HSP 1 Score: 164 bits (414), Expect = 1.630e-43
Identity = 106/294 (36.05%), Postives = 171/294 (58.16%), Query Frame = 0
Query:    1 MTAIGFEQAKADPFVSRKVVDGGAEMVAVVHVDGILAHAKDQATMDRFAAELGQNFRLKDTRDAEYYMGCHITRNRKARELKFVQRLYVESLVMKFDVK--KKTKIPAASGVPTLSKADEPRNPEEKEEMRKFPYREAVGVLMWTATMTRSDIACAVRAVARFCENPGPAHKNAVMKIFQYFLHTKEWRIMYGGQGCGLCMEAYTDSNFGACLNTRRSVSGAVSMLAKGAISWHSRMQEVTASGTSEAEYVALSEVVEDVLLLRQVQEFMEPSMRVGAINMFEDDEGAIKLATN 292
            + ++GFE A ADP V  +  +G  E +  ++VD +L  ++ +  +    A + + FR+KD   + + +G  I  + + R L   Q+ Y ES++ KF  +  K    P   GV  L+KADEP+  E+K +M+  PYR  VG LM+ A  TR DI+ AV  ++RF ENPG    +A +K+ +Y L TK+  I+Y G      +EAY+D ++    + RRSVSG + ML    + W S  Q+  A  ++EAEY+ALS+ V++ + +R++ E +    +VGA  ++ED++GA+ LA N
Sbjct:  182 LKSMGFEPADADPCVYTRG-EGEDECIVCLYVDDMLIASRQKTVIASVKAGIAEKFRIKDLGRSRFILGIEIDYDMERRTLGISQKAYTESIIKKFAQENVKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKRWDAGIKVVRYLLKTKDVGIVYDGLLVAQ-LEAYSDEDWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVQECVWMRRLLEDIGAE-QVGATVIYEDNQGAMALAKN 471          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig67.17718.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFG2_9PHAE1.750e-5540.27Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5J4N2_9PHAE1.320e-5240.27Integrase catalytic domain-containing protein n=18... [more]
A0A6H5L867_9PHAE1.320e-5240.27Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KBD4_9PHAE1.380e-5240.27Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JG40_9PHAE2.300e-5240.27Integrase catalytic domain-containing protein n=3 ... [more]
A0A6H5KTL3_9PHAE6.580e-4736.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JPC7_9PHAE1.330e-4439.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEF2_9PHAE4.250e-4436.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L4G9_9PHAE4.430e-4435.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6A3V8M8_9STRA1.630e-4336.05Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 4..101
e-value: 2.1E-7
score: 30.8
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 129..267
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 129..267

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig67contigF-serratus_M_contig67:338561..339436 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig67.17718.1mRNA_F-serratus_M_contig67.17718.1Fucus serratus malemRNAF-serratus_M_contig67 338561..339460 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig67.17718.1 ID=prot_F-serratus_M_contig67.17718.1|Name=mRNA_F-serratus_M_contig67.17718.1|organism=Fucus serratus male|type=polypeptide|length=292bp
MTAIGFEQAKADPFVSRKVVDGGAEMVAVVHVDGILAHAKDQATMDRFAA
ELGQNFRLKDTRDAEYYMGCHITRNRKARELKFVQRLYVESLVMKFDVKK
KTKIPAASGVPTLSKADEPRNPEEKEEMRKFPYREAVGVLMWTATMTRSD
IACAVRAVARFCENPGPAHKNAVMKIFQYFLHTKEWRIMYGGQGCGLCME
AYTDSNFGACLNTRRSVSGAVSMLAKGAISWHSRMQEVTASGTSEAEYVA
LSEVVEDVLLLRQVQEFMEPSMRVGAINMFEDDEGAIKLATN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like