prot_F-serratus_M_contig659.17550.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig659.17550.1
Unique Nameprot_F-serratus_M_contig659.17550.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length530
Homology
BLAST of mRNA_F-serratus_M_contig659.17550.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE)

HSP 1 Score: 343 bits (881), Expect = 1.100e-106
Identity = 200/521 (38.39%), Postives = 299/521 (57.39%), Query Frame = 0
Query:    1 MPTGLASYLPDEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDR-PKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLEEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYG-GATEDMKLSAWVDADHASCPDTRRSVSGGAVMLDGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPIDTN-IRVHEDNEGAIKMAENRFSSRRTRHIDVKHHMVRDAVDGGIVRVEYVKSRDQHADVLTKTIDAKSF 518
            +P  L   +  EP +  EA  S     W  A+  E++G I  G + +  + P+G  V+  + VFK K  + G++ K K R VAKGF+Q  G+ Y E+ SPT   +SIR+ +A+  + + E   LD+E AF ++ +  E+ ++LP G      ++ RL K++YGL  A   + K+   +L+  GFE+S +DPCV R     +V+ II ++VDD+L    TK+     +E L  S P K+L E+ ++LGC  +RDR+A T+   Q+ Y ++V ERF I +TS IP        S A+  ++  E  E   +P+RE VG LMW+AN TRP+ +    T+A+    P    WKA  K L YLK TA L + Y    T D+    +VDAD AS    RRSVSG  V++ G  +SWFS  Q+  + +TSE+EY+A+ + V E  F+  +   + P      I V EDNEGAI +AEN  SS R++HIDV+HH +R+  + G++ V +V S++QHAD+LTK +    F
Sbjct:  201 LPKELIQDVEPEPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFFQSKLDHEVLMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAG-TKRLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNICRTSSIPA-------SPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQLLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLF 713          
BLAST of mRNA_F-serratus_M_contig659.17550.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE)

HSP 1 Score: 349 bits (896), Expect = 1.640e-104
Identity = 198/519 (38.15%), Postives = 294/519 (56.65%), Query Frame = 0
Query:   13 PTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDR-PKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLEEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPV-PTGKASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLDGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPID-TNIRVHEDNEGAIKMAENRFSSRRTRHIDVKHHMVRDAVDGGIVRVEYVKSRDQHADVLTKTIDAKSFEKHARFLLNV 528
            P T  + K S    QW  A+K+EMDG    G +  +++ P+G+  + TK VF  K  + G +  +K R VA+GF Q+ G  Y  SSS  P  SSI++A+A   +     R  D++ A+  A + EELYV + DG      +V ++++A+YGL  +G  W  +    L+  G+E+ +ADPCVFR+   GKVV IIV+YVDD++ +   ++ E   +  LR + P+KDL E ++Y GC I RD +  T T  Q+ Y   + +RFGI  T+  P  P  +    R D P  D         P R+A+G LMW A  TRPD+A   + + +    P    WKA+++ L YL  T  LG+TY   +  + L  +VDA +A     RRSV+G AV + G  +S  S+ QRI + +TSE+EY+A  E V E  F+R V +F+ P      I+V EDN+GAI + +N FSS R++HIDV+ H +R+    G + VEY+ + +QHAD+LTK +     E H   L+N+
Sbjct:  736 PLTYEDVKWSKYRKQWDEAIKKEMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEE-LLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNAELGPKRDDEPGVDK--------PVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGS-GLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNI 1244          
BLAST of mRNA_F-serratus_M_contig659.17550.1 vs. uniprot
Match: A0A0A9Z683_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z683_LYGHE)

HSP 1 Score: 350 bits (898), Expect = 2.960e-104
Identity = 190/513 (37.04%), Postives = 302/513 (58.87%), Query Frame = 0
Query:   10 PDEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLEEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTG-KASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLDGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPIDT-NIRVHEDNEGAIKMAENRFSSRRTRHIDVKHHMVRDAVDGGIVRVEYVKSRDQHADVLTKTIDAKSFEK 520
            PD+PTT+ E K  S+   W+ A+  E   Q+  G W++VD P GK  L +K VF+ K    G++ K+K R V KG  Q KG+ ++E+ SP    SSIR  LA+ A+ D +  Q+D   AFL+ D+TEE+Y+  P+GY +S  +V RL+K++YGL  A  +W+ K    L   G  +S+ DPC++  K   K +V + V+VDDLL+ S+ K+        L   F + D+ E  + LG  I+RDR+ + +  DQ+ Y   V  RFG+   +    P      LS+   P +  E  +M  IPY+EAVG+L++ + + RPD+A+    +++F  NPGP HW AV + L+Y+K T+   + Y G T+  +++ + D+D AS  D R+SV+G   ++  G++SW ++ Q  TA +T+E+EY+AL+    E  +LR +   +VPP +   +R+  DN+GA+ +A+N     RT+HIDV+HH +R+ +   +++  YV + D  AD LTK++    F K
Sbjct:  837 PDDPTTVEEIKTRSDRDLWKQAMDVEYKSQLENGTWELVDLPPGKVPLNSKWVFRTKRDVTGKIVKHKARLVVKGCAQRKGLDFEETFSPVVRYSSIRYLLALAAKRDMDIHQMDAVSAFLQGDLTEEIYMRQPEGYQES-GKVCRLRKSLYGLKQASRVWNIKLDRSLKTIGLRQSKFDPCIYY-KSSQKKMVFVAVWVDDLLIFSDDKKLTQEVKSQLMKCFKMTDIGEAKFVLGFQISRDRERKKIWMDQRAYIDNVLIRFGMENCNPAATPLDPNIKLSKDQQPSSPDERKKMEAIPYQEAVGSLLFASQVCRPDIAFAVSLVSRFNSNPGPAHWAAVKRILRYMKGTSDWKLEYDG-TKSSEITGYCDSDFASDVDERKSVTGYVFLMCDGSVSWGTKKQPTTALSTTEAEYMALSAATQEALWLRGLSEELVPPSERIPLRIFVDNQGALNLAQNGSYQSRTKHIDVRHHFLREKISEKLIKPTYVPTSDMVADSLTKSLCPVKFIK 1346          
BLAST of mRNA_F-serratus_M_contig659.17550.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL)

HSP 1 Score: 331 bits (848), Expect = 3.320e-104
Identity = 187/497 (37.63%), Postives = 288/497 (57.95%), Query Frame = 0
Query:   24 EWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLEEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKA-SLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLDGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPIDTNIRVHEDNEGAIKMAENRFSSRRTRHIDVKHHMVRDAVDGGIVRVEYVKSRDQHADVLTKTIDAKSFE 519
            E  QW  A+K E D     G W  V R     V+ TK VF +K  + G + ++K R VA GF Q+ G+ + E+ +   +  SIR+ L+V     +   QLDV+ AFL AD+ E++Y+E P+G     ++V +L KA+YGL  AG  W K   G LI  GF+   +D C++  +  G     I +YVDD++V   T+       + + + F IK+L  + + LG  I  DR  R ++ +Q  Y +T+ ERF  +    +  P  ++  LS+ADGP++D + AEM   PYR  +G L +VA  TRPD+A+    L++F +NPGP HW A ++ L+YLK T   G++YGG  E+     + DAD  +  D RRSVSG  +M++GG I + ++ Q   A ++SE+EY+AL+    E+ ++R +   +   I   I+V EDN+GAI +A N     RT+HID++HH VRD V   ++++ YV+++ Q AD+LTK++  K FE
Sbjct:    5 EKEQWLKAVKAEFDAHSRNGTWTKVKRQTWMKVIKTKWVFAKKFNEHGDILRWKARLVALGFLQLFGVDFFETYAAVASMGSIRIFLSVCCAAGYILEQLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAWFKTIHGALIDLGFKPCGSDTCIYVGR-AGGDTTYICLYVDDMVVGGRTQTRVDEVKKLIAARFRIKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLKLSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTPVVFCDADWGTSVDDRRSVSGLVIMMNGGPIVFKAKYQSTVALSSSEAEYLALSLCGQEVMWVRTMLHDLGINIKKPIQVWEDNQGAIALAHNAGYHARTKHIDIRHHYVRDLVADSVIKLSYVETQRQLADILTKSLGTKRFE 500          
BLAST of mRNA_F-serratus_M_contig659.17550.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE)

HSP 1 Score: 329 bits (844), Expect = 4.690e-103
Identity = 184/502 (36.65%), Postives = 288/502 (57.37%), Query Frame = 0
Query:   28 WRGALKREMDGQIARGVWKVVD-RPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLEEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLDGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPID-TNIRVHEDNEGAIKMAENRFSSRRTRHIDVKHHMVRDAVDGGIVRVEYVKSRDQHADVLTKTIDAKSFEKHARFLLN 527
            W  A++ E DG +  G +  VD  P+G+  + +K  F  K  +DG++EK+K R VA+GF QI  + Y  SSSP P+ +SI++ LAV  +   +    DV+ AF  A + E++++ LP G  +  ++V + ++A+YGL  +G  W       L+  GFE+ +ADPCVFR K    VV        D ++++ +  D    +  L  +FP KDL E  ++ GC + RD +A T+   Q  Y  ++  RF ++ TS IP   G        GPK D E       P REA+G++MWV+  +RPD+++    +A+    P   HWKA++K L YLK T  LG+TY   +  + L+ +VDA +A   D RRSVSG A  + G  IS  S+ Q I + +++E+EY+A  E V E  F+R V +F+ P    ++I+V EDN+GA+ + +N  SS R++HIDV++H +R     G + +++V + +QHAD+LTK +   S + H R L+N
Sbjct:   15 WEQAMREEFDGHLGTGTFSFVDGTPEGRRPVSSKWRFTWKTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFR-KMKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDI-----GPKRDDESGGEW--PVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGS-GLGLAVYVDASYADAED-RRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSKSSLQYHRRKLMN 506          
BLAST of mRNA_F-serratus_M_contig659.17550.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE)

HSP 1 Score: 348 bits (894), Expect = 1.330e-102
Identity = 200/518 (38.61%), Postives = 295/518 (56.95%), Query Frame = 0
Query:   13 PTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDR-PKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLEEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLDGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPID-TNIRVHEDNEGAIKMAENRFSSRRTRHIDVKHHMVRDAVDGGIVRVEYVKSRDQHADVLTKTIDAKSFEKHARFLLNV 528
            P T  + K S    QW  A+K+EMDG    G +  +++ P+G+  + TK VF  K  + G +  +K R VA+GF Q+ G  Y  SSS  P  SSI++A+A   +     R  D++ A+  A + EELYV + DG      +V ++++A+YGL  +G  W  +    L+  G+E+ +ADPCVFR+   GKVV IIV+YVDD++ +   ++ E   +  LR + P+KDL E ++Y GC I RD +  T T  Q+ Y   + +RFGI  T+  P     A L    GPK D E       P R+A+G LMW A  TRPD+A   + + +    P    WKA+++ L YL  T  LG+TY   +  + L  +VDA +A     RRSV+G AV + G  +S  S+ QRI + +TSE+EY+A  E V E  F+R V +F+ P      I+V EDN+GAI + +N FSS R++HIDV+ H +R+    G + VEY+ + +QHAD+LTK +     E H   L+N+
Sbjct: 1289 PLTYEDVKWSKYRKQWDEAIKKEMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEE-LLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPN-ADL----GPKRDDEPGVDK--PVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGS-GLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNI 1797          
BLAST of mRNA_F-serratus_M_contig659.17550.1 vs. uniprot
Match: W8BNV5_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BNV5_CERCA)

HSP 1 Score: 329 bits (844), Expect = 2.670e-102
Identity = 187/529 (35.35%), Postives = 298/529 (56.33%), Query Frame = 0
Query:   12 EPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELP----------DGYHDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLEEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKA-SLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLDGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPIDTNIRVHEDNEGAIKMAENRFSSRRTRHIDVKHHMVRDAVDGGIVRVEYVKSRDQHADVLTKTIDAKSFEKHARFLLNVG 529
            +P T  +A  S E  +W+ A+ +E    IA   W++VDRP GK ++ +K   + K  Q+G +EK K R VAKGF Q  GI Y E+ +P    ++IR+ +A+ A++  E  QLD   A+L   +  E+Y++LP          +    + ++V  L+KA+YGL  +G LW +K   +L   G   S++DPC++   +    +++I +YVDDL+V    KQ   R  ++L SSF +KDL  I   LG    +  K  T+T  Q RY   +  RF +     +  P   +  L +   PK + E      +PY+  VG+LM++A  TRPD+A+    L++F  N G +HW A  + L+YLK T +LG+++   T +  L  + DAD  S  D RRS +G A  L   AISW SR QR  A +++ESEY++L++   E  +L+++   ++   D  I ++ DN+GA K+++N     RT+H+D++HH VR+AVD   ++VEY+ + +  AD+LTK++ A    KH   + N+G
Sbjct:   89 DPETSAQALTSPEASEWKKAMLKEYRTLIANNTWEIVDRPIGKKIVESKWALRTKYNQNGNIEKRKARLVAKGFTQRAGIDYSETFAPVARLNTIRLLMAISAEMGLEIHQLDFVSAYLNGTIETEIYMKLPTDLFSILDEEEASQYTEDKVCLLKKAIYGLKQSGRLWYQKLHTKLSNMGMSASKSDPCLYTYNN-NNTIILIAIYVDDLIVACNDKQKLSRIKDELASSFEMKDLGPIKLCLGIEFNQCLKTNTITMCQSRYVAEILNRFQMNDCKPVSTPANTSIKLCKEMCPKTEEEKLSASKLPYQNLVGSLMYLAVSTRPDIAHIVSVLSQFNTNYGNQHWVAAKRVLRYLKGTPNLGISFT-RTRNFSLEGFADADWGSNIDDRRSYTGFAFTLANAAISWESRKQRTVAISSTESEYMSLSDSTKEAIYLKRLLREIIGE-DRTITIYNDNQGAGKLSKNPIFHNRTKHVDIRHHFVREAVDRKDIKVEYISTEEMPADILTKSLPAT---KHQNCIKNLG 611          
BLAST of mRNA_F-serratus_M_contig659.17550.1 vs. uniprot
Match: A0A438HUL4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HUL4_VITVI)

HSP 1 Score: 326 bits (835), Expect = 5.830e-102
Identity = 189/518 (36.49%), Postives = 292/518 (56.37%), Query Frame = 0
Query:    9 LPDEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGY--HDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLEEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKAS-LSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLDGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQ--VKAFMVPPIDTNIRVHEDNEGAIKMAENRFSSRRTRHIDVKHHMVRDAVDGGIVRVEYVKSRDQHADVLTKTIDAKSFEKH 521
            L D+P +L + K SS   +W  A+K EM      GVW +V+ PKG   +G K +FK K    G + +YK R VAKGF Q +GI Y+E+ SP  ++ S R+ +A++A  D E  Q+DV+ AFL  ++ E +Y+  P+ +  +DS   V RL++++YGL  A   W +KF   + + GF+ +  D C++  K  G   +I+V+YVDD+L+ S      H  M  L S F +KDL   S+ LG  I RDR    +   Q+ Y   V  RFG+   +    P  K    S    PKN+ E  +M   PY  AVG+LM+    TRPD+AY    L ++  NPG +HWK   + ++YL+RT    +TY  ++  +++ A+ D+D A C D+RRS SG   ML GGA+SW S  Q + A++T E+E++A  E  N   +LR    +  +V  I+  +R++ DN+ A   ++N  SS +++HID+K  +V++ V    V +E++ +    AD LTK +  K + +H
Sbjct:    3 LEDDPISLSQVKQSSNSEKWIKAMKDEMKSMKDNGVWDLVELPKGVKPIGCKWIFKTKRDSKGNIVRYKARLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFESNDSKQLVCRLKRSIYGLKQASRQWYRKFDQVITSFGFKENTVDQCIYL-KFSGSKFIILVLYVDDILLASSDVGLLHETMRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRFGMSNYAPGDTPVAKGDKFSLHQCPKNELEKKDMERFPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRVMRYLQRTKDYMLTYRRSSH-LEIVAYSDSDFAGCLDSRRSTSGCIFMLAGGAVSWKSVKQTLVASSTMEAEFIACYEASNHGIWLRNFVTQLRIVDGIEKPLRINCDNKAAELYSKNNRSSSKSKHIDIKFLVVKERVQSLQVSIEHISTNSMIADPLTKGLPPKVYHEH 518          
BLAST of mRNA_F-serratus_M_contig659.17550.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 340 bits (872), Expect = 4.190e-101
Identity = 191/503 (37.97%), Postives = 297/503 (59.05%), Query Frame = 0
Query:   28 WRGALKREMDGQIARGVWKVVD-RPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLEEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLDGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPID-TNIRVHEDNEGAIKMAENRFSSRRTRHIDVKHHMVRDAVDGGIVRVEYVKSRDQHADVLTKTIDAKSFEKHARFLLNV 528
            W  A++ E +G +  G +  VD  P+G+  + +K  F  K  ++G+++ +K R VA+GF QI  + Y  SSSP P+ +SI++ LAV  +        DV+ A+  A + EE++++LP G  D  +++ + ++A+YGL  +G  W       L+  GFE+ +ADPCVFR+     VV+IIV+YVDD+LV   + +D    +  L   FP K+L E  ++ GC I RD +A T+   Q  Y  ++ ERF ++ TS IP   G A L    GPK + E  E    P REA+G++MWV+  +RPD+++    +A+    P   HW A+ K L YLK T  LG+TY   +  + L+ +VDA +A   D RRSVSG A  + G  +S  S+ Q I + +++E+EY+A  E V E  F+R V +F+ P    ++I+V EDN+GAI + +N  SS RT+HIDV++H +R     G + V++V + +QHAD+LTK +   S + H R L+N+
Sbjct:  752 WEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAG-SDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPG-ADL----GPKREDE--EGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGS-GLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNL 1244          
BLAST of mRNA_F-serratus_M_contig659.17550.1 vs. uniprot
Match: A0A2P6Q6P3_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6Q6P3_ROSCH)

HSP 1 Score: 320 bits (821), Expect = 2.910e-100
Identity = 183/492 (37.20%), Postives = 286/492 (58.13%), Query Frame = 0
Query:   32 LKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQ--VGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLEEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKA-SLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLDGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQ-VKAFMVPPIDTNIRVHEDNEGAIKMAENRFSSRRTRHIDVKHHMVRDAVDGGIVRVEYVKSRDQHADVLTKTIDAKSFE 519
            +K EM+  +    +++V+ PKG+  L  K VFK K  ++ ++ K+K R V KGF Q +GI + E  SP    +SIR+ L + A +D E  QLDV+ AFL  D+ EE+Y+E P+G+     Q  V +L+K++YGL  A   W KKF   ++  G++R+ ADPCV+ ++  G   +I+++YVDD+L++ +      +   DL  SF +KDL      LG  ITRDR+A+ +   Q+RY + V ERF +++   +  P G    LSR   P    E  +M GIPY  AVG+LM+    TRPD+A+    ++++  NPG EHW+AV   L+YL+ T+ L + +GG+  +  L  + DAD A   D R+S S       GGA+SW S+ Q+  A +T+ESEY+A  E   E+ +L++ V+   V     N  VH D++ AI +++N     RT+HID ++H +RDAV     ++  + +    +D+LTK +  + FE
Sbjct:    1 MKSEMESLLKNDTYELVELPKGRKALKNKWVFKLKRDENEQLTKFKARLVVKGFGQKEGIDFDEIFSPVVKMTSIRIILGMAASMDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVERKQHMVCKLKKSLYGLKQAPRQWYKKFDSFMVGHGYKRTDADPCVYLQRFTGGNFIILLLYVDDMLIVGKDVSMIRKLKADLSKSFDMKDLGPAKQILGMEITRDRQAKKLWLSQERYVERVLERFNMKEAKSVSSPLGNHFKLSRLSCPTTQVEKDKMAGIPYSSAVGSLMYAMVCTRPDIAHAVGVVSRYLSNPGREHWEAVKWILKYLRGTSKLCLCFGGS--EPILEGFTDADLAGDLDNRKSTSAYLFTFSGGAVSWQSKLQKCVALSTTESEYLAANEAGKEMIWLQRFVQELGVK--QGNYVVHCDSQSAIHLSKNSMYHPRTKHIDHRYHWIRDAVSKKFFQLRKIHTNKNISDMLTKVVQQQKFE 488          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig659.17550.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JV80_9PHAE1.100e-10638.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JKS3_9PHAE1.640e-10438.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0A9Z683_LYGHE2.960e-10437.04Retrovirus-related Pol polyprotein from transposon... [more]
A0A8K1CTN1_PYTOL3.320e-10437.63Uncharacterized protein n=2 Tax=Pythium oligandrum... [more]
A0A6H5JCG0_9PHAE4.690e-10336.65Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L175_9PHAE1.330e-10238.61Uncharacterized protein n=9 Tax=Ectocarpus sp. CCA... [more]
W8BNV5_CERCA2.670e-10235.35Retrovirus-related Pol polyprotein from transposon... [more]
A0A438HUL4_VITVI5.830e-10236.49Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5KSG8_9PHAE4.190e-10137.97Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2P6Q6P3_ROSCH2.910e-10037.20Putative RNA-directed DNA polymerase n=1 Tax=Rosa ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 44..284
e-value: 1.5E-53
score: 182.0
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 11..515
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 115..480

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig659contigF-serratus_M_contig659:98390..99979 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig659.17550.1mRNA_F-serratus_M_contig659.17550.1Fucus serratus malemRNAF-serratus_M_contig659 98390..99979 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig659.17550.1 ID=prot_F-serratus_M_contig659.17550.1|Name=mRNA_F-serratus_M_contig659.17550.1|organism=Fucus serratus male|type=polypeptide|length=530bp
MPTGLASYLPDEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDR
PKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPT
PTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSP
NQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGK
VVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLEEISYYLGCHIT
RDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRADGPKNDA
EIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAV
MKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVM
LDGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPID
TNIRVHEDNEGAIKMAENRFSSRRTRHIDVKHHMVRDAVDGGIVRVEYVK
SRDQHADVLTKTIDAKSFEKHARFLLNVG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2