mRNA_F-serratus_M_contig659.17550.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig659.17550.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE) HSP 1 Score: 343 bits (881), Expect = 1.100e-106 Identity = 200/521 (38.39%), Postives = 299/521 (57.39%), Query Frame = 1
Query: 1 MPTGLASYLPDEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDR-PKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLEEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYG-GATEDMKLSAWVDADHASCPDTRRSVSGGAVMLDGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPIDTN-IRVHEDNEGAIKMAENRFSSRRTRHIDVKHHMVRDAVDGGIVRVEYVKSRDQHADVLTKTIDAKSF 1554
+P L + EP + EA S W A+ E++G I G + + + P+G V+ + VFK K + G++ K K R VAKGF+Q G+ Y E+ SPT +SIR+ +A+ + + E LD+E AF ++ + E+ ++LP G ++ RL K++YGL A + K+ +L+ GFE+S +DPCV R +V+ II ++VDD+L TK+ +E L S P K+L E+ ++LGC +RDR+A T+ Q+ Y ++V ERF I +TS IP S A+ ++ E E +P+RE VG LMW+AN TRP+ + T+A+ P WKA K L YLK TA L + Y T D+ +VDAD AS RRSVSG V++ G +SWFS Q+ + +TSE+EY+A+ + V E F+ + + P I V EDNEGAI +AEN SS R++HIDV+HH +R+ + G++ V +V S++QHAD+LTK + F
Sbjct: 201 LPKELIQDVEPEPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFFQSKLDHEVLMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAG-TKRLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNICRTSSIPA-------SPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQLLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLF 713
BLAST of mRNA_F-serratus_M_contig659.17550.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE) HSP 1 Score: 349 bits (896), Expect = 1.640e-104 Identity = 198/519 (38.15%), Postives = 294/519 (56.65%), Query Frame = 1
Query: 37 PTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDR-PKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLEEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPV-PTGKASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLDGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPID-TNIRVHEDNEGAIKMAENRFSSRRTRHIDVKHHMVRDAVDGGIVRVEYVKSRDQHADVLTKTIDAKSFEKHARFLLNV 1584
P T + K S QW A+K+EMDG G + +++ P+G+ + TK VF K + G + +K R VA+GF Q+ G Y SSS P SSI++A+A + R D++ A+ A + EELYV + DG +V ++++A+YGL +G W + L+ G+E+ +ADPCVFR+ GKVV IIV+YVDD++ + ++ E + LR + P+KDL E ++Y GC I RD + T T Q+ Y + +RFGI T+ P P + R D P D P R+A+G LMW A TRPD+A + + + P WKA+++ L YL T LG+TY + + L +VDA +A RRSV+G AV + G +S S+ QRI + +TSE+EY+A E V E F+R V +F+ P I+V EDN+GAI + +N FSS R++HIDV+ H +R+ G + VEY+ + +QHAD+LTK + E H L+N+
Sbjct: 736 PLTYEDVKWSKYRKQWDEAIKKEMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEE-LLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNAELGPKRDDEPGVDK--------PVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGS-GLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNI 1244
BLAST of mRNA_F-serratus_M_contig659.17550.1 vs. uniprot
Match: A0A0A9Z683_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z683_LYGHE) HSP 1 Score: 350 bits (898), Expect = 2.960e-104 Identity = 190/513 (37.04%), Postives = 302/513 (58.87%), Query Frame = 1
Query: 28 PDEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLEEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTG-KASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLDGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPIDT-NIRVHEDNEGAIKMAENRFSSRRTRHIDVKHHMVRDAVDGGIVRVEYVKSRDQHADVLTKTIDAKSFEK 1560
PD+PTT+ E K S+ W+ A+ E Q+ G W++VD P GK L +K VF+ K G++ K+K R V KG Q KG+ ++E+ SP SSIR LA+ A+ D + Q+D AFL+ D+TEE+Y+ P+GY +S +V RL+K++YGL A +W+ K L G +S+ DPC++ K K +V + V+VDDLL+ S+ K+ L F + D+ E + LG I+RDR+ + + DQ+ Y V RFG+ + P LS+ P + E +M IPY+EAVG+L++ + + RPD+A+ +++F NPGP HW AV + L+Y+K T+ + Y G T+ +++ + D+D AS D R+SV+G ++ G++SW ++ Q TA +T+E+EY+AL+ E +LR + +VPP + +R+ DN+GA+ +A+N RT+HIDV+HH +R+ + +++ YV + D AD LTK++ F K
Sbjct: 837 PDDPTTVEEIKTRSDRDLWKQAMDVEYKSQLENGTWELVDLPPGKVPLNSKWVFRTKRDVTGKIVKHKARLVVKGCAQRKGLDFEETFSPVVRYSSIRYLLALAAKRDMDIHQMDAVSAFLQGDLTEEIYMRQPEGYQES-GKVCRLRKSLYGLKQASRVWNIKLDRSLKTIGLRQSKFDPCIYY-KSSQKKMVFVAVWVDDLLIFSDDKKLTQEVKSQLMKCFKMTDIGEAKFVLGFQISRDRERKKIWMDQRAYIDNVLIRFGMENCNPAATPLDPNIKLSKDQQPSSPDERKKMEAIPYQEAVGSLLFASQVCRPDIAFAVSLVSRFNSNPGPAHWAAVKRILRYMKGTSDWKLEYDG-TKSSEITGYCDSDFASDVDERKSVTGYVFLMCDGSVSWGTKKQPTTALSTTEAEYMALSAATQEALWLRGLSEELVPPSERIPLRIFVDNQGALNLAQNGSYQSRTKHIDVRHHFLREKISEKLIKPTYVPTSDMVADSLTKSLCPVKFIK 1346
BLAST of mRNA_F-serratus_M_contig659.17550.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL) HSP 1 Score: 331 bits (848), Expect = 3.320e-104 Identity = 187/497 (37.63%), Postives = 288/497 (57.95%), Query Frame = 1
Query: 70 EWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLEEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKA-SLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLDGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPIDTNIRVHEDNEGAIKMAENRFSSRRTRHIDVKHHMVRDAVDGGIVRVEYVKSRDQHADVLTKTIDAKSFE 1557
E QW A+K E D G W V R V+ TK VF +K + G + ++K R VA GF Q+ G+ + E+ + + SIR+ L+V + QLDV+ AFL AD+ E++Y+E P+G ++V +L KA+YGL AG W K G LI GF+ +D C++ + G I +YVDD++V T+ + + + F IK+L + + LG I DR R ++ +Q Y +T+ ERF + + P ++ LS+ADGP++D + AEM PYR +G L +VA TRPD+A+ L++F +NPGP HW A ++ L+YLK T G++YGG E+ + DAD + D RRSVSG +M++GG I + ++ Q A ++SE+EY+AL+ E+ ++R + + I I+V EDN+GAI +A N RT+HID++HH VRD V ++++ YV+++ Q AD+LTK++ K FE
Sbjct: 5 EKEQWLKAVKAEFDAHSRNGTWTKVKRQTWMKVIKTKWVFAKKFNEHGDILRWKARLVALGFLQLFGVDFFETYAAVASMGSIRIFLSVCCAAGYILEQLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAWFKTIHGALIDLGFKPCGSDTCIYVGR-AGGDTTYICLYVDDMVVGGRTQTRVDEVKKLIAARFRIKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLKLSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTPVVFCDADWGTSVDDRRSVSGLVIMMNGGPIVFKAKYQSTVALSSSEAEYLALSLCGQEVMWVRTMLHDLGINIKKPIQVWEDNQGAIALAHNAGYHARTKHIDIRHHYVRDLVADSVIKLSYVETQRQLADILTKSLGTKRFE 500
BLAST of mRNA_F-serratus_M_contig659.17550.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE) HSP 1 Score: 348 bits (894), Expect = 1.330e-102 Identity = 200/518 (38.61%), Postives = 295/518 (56.95%), Query Frame = 1
Query: 37 PTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDR-PKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLEEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLDGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPID-TNIRVHEDNEGAIKMAENRFSSRRTRHIDVKHHMVRDAVDGGIVRVEYVKSRDQHADVLTKTIDAKSFEKHARFLLNV 1584
P T + K S QW A+K+EMDG G + +++ P+G+ + TK VF K + G + +K R VA+GF Q+ G Y SSS P SSI++A+A + R D++ A+ A + EELYV + DG +V ++++A+YGL +G W + L+ G+E+ +ADPCVFR+ GKVV IIV+YVDD++ + ++ E + LR + P+KDL E ++Y GC I RD + T T Q+ Y + +RFGI T+ P A L GPK D E P R+A+G LMW A TRPD+A + + + P WKA+++ L YL T LG+TY + + L +VDA +A RRSV+G AV + G +S S+ QRI + +TSE+EY+A E V E F+R V +F+ P I+V EDN+GAI + +N FSS R++HIDV+ H +R+ G + VEY+ + +QHAD+LTK + E H L+N+
Sbjct: 1289 PLTYEDVKWSKYRKQWDEAIKKEMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEE-LLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPN-ADL----GPKRDDEPGVDK--PVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGS-GLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDHRNALMNI 1797
BLAST of mRNA_F-serratus_M_contig659.17550.1 vs. uniprot
Match: W8BNV5_CERCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Ceratitis capitata TaxID=7213 RepID=W8BNV5_CERCA) HSP 1 Score: 329 bits (844), Expect = 2.670e-102 Identity = 187/529 (35.35%), Postives = 298/529 (56.33%), Query Frame = 1
Query: 34 EPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELP----------DGYHDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLEEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKA-SLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLDGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPIDTNIRVHEDNEGAIKMAENRFSSRRTRHIDVKHHMVRDAVDGGIVRVEYVKSRDQHADVLTKTIDAKSFEKHARFLLNVG 1587
+P T +A S E +W+ A+ +E IA W++VDRP GK ++ +K + K Q+G +EK K R VAKGF Q GI Y E+ +P ++IR+ +A+ A++ E QLD A+L + E+Y++LP + + ++V L+KA+YGL +G LW +K +L G S++DPC++ + +++I +YVDDL+V KQ R ++L SSF +KDL I LG + K T+T Q RY + RF + + P + L + PK + E +PY+ VG+LM++A TRPD+A+ L++F N G +HW A + L+YLK T +LG+++ T + L + DAD S D RRS +G A L AISW SR QR A +++ESEY++L++ E +L+++ ++ D I ++ DN+GA K+++N RT+H+D++HH VR+AVD ++VEY+ + + AD+LTK++ A KH + N+G
Sbjct: 89 DPETSAQALTSPEASEWKKAMLKEYRTLIANNTWEIVDRPIGKKIVESKWALRTKYNQNGNIEKRKARLVAKGFTQRAGIDYSETFAPVARLNTIRLLMAISAEMGLEIHQLDFVSAYLNGTIETEIYMKLPTDLFSILDEEEASQYTEDKVCLLKKAIYGLKQSGRLWYQKLHTKLSNMGMSASKSDPCLYTYNN-NNTIILIAIYVDDLIVACNDKQKLSRIKDELASSFEMKDLGPIKLCLGIEFNQCLKTNTITMCQSRYVAEILNRFQMNDCKPVSTPANTSIKLCKEMCPKTEEEKLSASKLPYQNLVGSLMYLAVSTRPDIAHIVSVLSQFNTNYGNQHWVAAKRVLRYLKGTPNLGISFT-RTRNFSLEGFADADWGSNIDDRRSYTGFAFTLANAAISWESRKQRTVAISSTESEYMSLSDSTKEAIYLKRLLREIIGE-DRTITIYNDNQGAGKLSKNPIFHNRTKHVDIRHHFVREAVDRKDIKVEYISTEEMPADILTKSLPAT---KHQNCIKNLG 611
BLAST of mRNA_F-serratus_M_contig659.17550.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 340 bits (872), Expect = 4.190e-101 Identity = 191/503 (37.97%), Postives = 297/503 (59.05%), Query Frame = 1
Query: 82 WRGALKREMDGQIARGVWKVVD-RPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLEEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLDGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPID-TNIRVHEDNEGAIKMAENRFSSRRTRHIDVKHHMVRDAVDGGIVRVEYVKSRDQHADVLTKTIDAKSFEKHARFLLNV 1584
W A++ E +G + G + VD P+G+ + +K F K ++G+++ +K R VA+GF QI + Y SSSP P+ +SI++ LAV + DV+ A+ A + EE++++LP G D +++ + ++A+YGL +G W L+ GFE+ +ADPCVFR+ VV+IIV+YVDD+LV + +D + L FP K+L E ++ GC I RD +A T+ Q Y ++ ERF ++ TS IP G A L GPK + E E P REA+G++MWV+ +RPD+++ +A+ P HW A+ K L YLK T LG+TY + + L+ +VDA +A D RRSVSG A + G +S S+ Q I + +++E+EY+A E V E F+R V +F+ P ++I+V EDN+GAI + +N SS RT+HIDV++H +R G + V++V + +QHAD+LTK + S + H R L+N+
Sbjct: 752 WEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAG-SDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPG-ADL----GPKREDE--EGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGS-GLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNL 1244
BLAST of mRNA_F-serratus_M_contig659.17550.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE) HSP 1 Score: 339 bits (869), Expect = 5.200e-100 Identity = 200/532 (37.59%), Postives = 302/532 (56.77%), Query Frame = 1
Query: 1 MPTGLASYLPDEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKV-VDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLEEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRADGPKNDAEIAEMHG---IPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYG-GATEDMKLSAWVDADHASCPDTRRSVSGGAVMLDGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPIDTN-IRVHEDNEGAIKMAENRFSSRRTRHIDVKHHMVRDAVDGGIVRVEYVKSRDQHADVLTKTIDAKSFEKHARFLL 1578
+P L + EP + EA+ S W GA E++G + G + + V P G V+ + VFK K + G++ K K R VAKGF+Q G+ Y E+ SPT +S R+ +A+ + + E D+E AF+++++ E+++++P G +V RL K++YGL A + K+ EL GFE+S +DPCV R +VV ++ ++VDD+L TK + L S P K+L E+ ++LGC RDRKA T+ Q+ Y ++V ERF I +TS IP ASL+ +D + E G +P+RE VG+LMW+A+ TR D++ +A+ P HWKA K L YL TA L + + ++ D+ +VDAD AS RRSVSG V + + W SR Q+ + +TSE+EY+A+ + V E F+ + F+ P + I V EDNEGAI +AEN SS R++HIDV+HH +R+ + G++ V +V S++QHAD+LTK + FE H F L
Sbjct: 877 LPKELVQDVESEPGSYEEAQRSKYAKIWEGARSAEVEGLMRAGTFTLAVKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASFRLVVALACKYNLELLHWDIEQAFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAG-TKSLAEVVVAALGDSLPTKNLGEVKFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIP-----ASLNN-----DDRSLMEEEGAGDVPFREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLFEVHRDFAL 1397
BLAST of mRNA_F-serratus_M_contig659.17550.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE) HSP 1 Score: 332 bits (851), Expect = 5.930e-100 Identity = 196/531 (36.91%), Postives = 295/531 (55.56%), Query Frame = 1
Query: 1 MPTGLASYLPDEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDR-PKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDSPNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLEEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTSVIPVPTGKASLSRADGPKND-AEIAEMHG---IPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATE-DMKLSAWVDADHASCPDTRRSVSGGAVMLDGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFMVPPIDTN-IRVHEDNEGAIKMAENRFSSRRTRHIDVKHHMVRDAVDGGIVRVEYVKSRDQHADVLTKTIDAKSFEKHARF 1572
+P L + P + EA+ S W GA+ E++G I G + + + P V+ + VFK K + G++ K K R VAKGF+Q G+ Y E+ SPT +S R+ +A+ + + E D+E AF+++++ E++++LP G +V RL K++YGL A + K+ EL GFE+S +DPCV R +VV ++ ++VDD+L TK + L S P K+L E+ ++LGC RDR+A T+ Q+ Y ++V ERF + +TS IP P ND + E G +P+RE VG+LMW+AN TRPD++ +A+ P HWKA K L YL TA L + + D +VDAD AS + RRSVSG V++ + W S+ Q+ + +TSE+EY+A+ + V E F+ + F+ P I V EDNEGAI +AEN SS R++HIDV+HH +R+ + G++ V +V S +QHAD+LTK + FE H F
Sbjct: 436 LPKELVQDVESVPDSYQEAQRSKYAKIWEGAMSAEVEGLIRAGTFTLAAKVPISCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAG-TKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPA-----------SPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVHRDF 954
BLAST of mRNA_F-serratus_M_contig659.17550.1 vs. uniprot
Match: A0A4Q3DG62_9RICK (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Rickettsiaceae bacterium TaxID=2023360 RepID=A0A4Q3DG62_9RICK) HSP 1 Score: 324 bits (831), Expect = 6.450e-100 Identity = 187/517 (36.17%), Postives = 296/517 (57.25%), Query Frame = 1
Query: 31 DEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMAQLDWEGRQLDVEMAFLEADVTEELYVELPDGYHDS--PNQVGRLQKAMYGLMHAGLLWSKKFGGELIAKGFERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHRAMEDLRSSFPIKDLEEISYYLGCHITRDRKARTVTFDQQRYAQTVTERFGIRKTS--VIPVPTGKASLSRADGPKNDAEIAEMHGIPYREAVGALMWVANMTRPDLAYTAHTLAKFGDNPGPEHWKAVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLDGGAISWFSRAQRITATATSESEYVALAEIVNELRFLRQVKAFM--VPPIDTNIRVHEDNEGAIKMAENRFSSRRTRHIDVKHHMVRDAVDGGIVRVEYVKSRDQHADVLTKTIDAKSFEKH 1563
D+P + ++A + + +W A+ E++ + VW +VD P+ +G K ++KRK G DG+VE +K R VAKGF Q +GI Y E+ SP SIR+ LA+ A D+E Q+DV+ AFL + EE+Y+ PDG+ + ++V +L K++YGL A W+++F + GFE++ ++PCV+ K+ KVVV +V+YVDD+L++ + E L F +KDL ++ LG I RDRK + + Q Y V RF ++ ++P+ +GK LS+ PK E+ +M +PY AVG+LM+ TRPD+ Y ++++ NPG EHW AV L+YLKRT + + Y + D+ + + D+D + D +S SG L+GGAI W S Q A +T E+EY+A +E E +L+ A + VP ++ +++H DN GAI ++ S +R +HI+ K+H++R+ V G V V + + D AD +TK + F KH
Sbjct: 131 DDPVSFNDAMVDLDKEKWLEAMNLEIESMHSNSVWTLVDAPEQIRPIGCKWIYKRKKGADGQVETFKARLVAKGFTQREGIDYDETFSPVAMFKSIRILLAIAAHYDYEIWQMDVKTAFLNGYLEEEIYMAQPDGFIEKGQEHKVCKLLKSIYGLKQASRSWNQRFDEVIKTYGFEQNLSEPCVY--KYSKKVVVFLVLYVDDILLIGSDIKVMSDIKEWLAKQFQMKDLGNAAFVLGIQIIRDRKNKLLALSQGTYIDKVLSRFSMQNAHGVLLPIRSGKF-LSKEQCPKTPQEVEDMSRVPYASAVGSLMYAMLCTRPDICYAVGVVSRYQSNPGQEHWIAVKHILKYLKRTRDMMLVY--TSNDLVIQGYTDSDFQADRDMLKSTSGSVFTLNGGAIVWRSIKQSSIADSTMEAEYIAASEAAKEAVWLKNFLAELEVVPKMNEPVQLHCDNTGAIANSKEPRSHKRGKHIERKYHLIREIVRRGDVAVMKISTLDNIADPMTKGLSEHVFMKH 642 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig659.17550.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig659.17550.1 >prot_F-serratus_M_contig659.17550.1 ID=prot_F-serratus_M_contig659.17550.1|Name=mRNA_F-serratus_M_contig659.17550.1|organism=Fucus serratus male|type=polypeptide|length=530bp MPTGLASYLPDEPTTLHEAKMSSEWPQWRGALKREMDGQIARGVWKVVDRback to top mRNA from alignment at F-serratus_M_contig659:98390..99979+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig659.17550.1 ID=mRNA_F-serratus_M_contig659.17550.1|Name=mRNA_F-serratus_M_contig659.17550.1|organism=Fucus serratus male|type=mRNA|length=1590bp|location=Sequence derived from alignment at F-serratus_M_contig659:98390..99979+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig659:98390..99979+ >mRNA_F-serratus_M_contig659.17550.1 ID=mRNA_F-serratus_M_contig659.17550.1|Name=mRNA_F-serratus_M_contig659.17550.1|organism=Fucus serratus male|type=CDS|length=3180bp|location=Sequence derived from alignment at F-serratus_M_contig659:98390..99979+ (Fucus serratus male)back to top |