mRNA_F-serratus_M_contig6469.17410.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6469.17410.1 vs. uniprot
Match: D8LP52_ECTSI (FirrV-1-A34 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP52_ECTSI) HSP 1 Score: 74.7 bits (182), Expect = 4.110e-14 Identity = 40/85 (47.06%), Postives = 54/85 (63.53%), Query Frame = 1
Query: 13 LGAMIEVPTPSGSKDVLSENEVIDVKHYRSWKNAVVQVIAYGHYYYPSHKKRLNLFAQEGDKIASKYLQLATPVCSANGIEVTFE 267
+G E TP G DVLS+ EVI+VKHY WK+ + QV++Y +Y P KRL+LFAQ G K +YL+ A C + ++VTFE
Sbjct: 64 VGGKTEQETPVGFIDVLSDTEVIEVKHYTLWKHGLGQVLSYQRHY-PHLDKRLHLFAQIGCKNTDQYLEKAKSTCDSFAVKVTFE 147
BLAST of mRNA_F-serratus_M_contig6469.17410.1 vs. uniprot
Match: UPI001D2F14B2 (hypothetical protein n=1 Tax=Waterburya agarophytonicola TaxID=2886916 RepID=UPI001D2F14B2) HSP 1 Score: 69.7 bits (169), Expect = 4.710e-13 Identity = 38/89 (42.70%), Postives = 55/89 (61.80%), Query Frame = 1
Query: 1 ISRRLGAMIEVPTPSGSKDVLSENEVIDVKHYRSWKNAVVQVIAYGHYYYPSHKKRLNLFAQEGDKIASKYLQLATPVCSANGIEVTFE 267
+++ L EV PSG D+L+ N++I+VKH + W A+ QVI YG Y+YP+H+KR++LF E + +SK L L C I TFE
Sbjct: 70 LAKSLNGQTEVRVPSGRIDILTSNQIIEVKHIKKWNAALGQVITYG-YHYPNHQKRIHLFGVENN--SSKIL-LIQKQCQEQNIIATFE 154
BLAST of mRNA_F-serratus_M_contig6469.17410.1 vs. uniprot
Match: UPI0017825BA5 (hypothetical protein n=1 Tax=Komarekiella sp. 'clone 1' TaxID=2593771 RepID=UPI0017825BA5) HSP 1 Score: 64.7 bits (156), Expect = 1.240e-10 Identity = 35/89 (39.33%), Postives = 55/89 (61.80%), Query Frame = 1
Query: 1 ISRRLGAMIEVPTPSGSKDVLSENEVIDVKHYRSWKNAVVQVIAYGHYYYPSHKKRLNLFAQEGDKIASKYLQLATPVCSANGIEVTFE 267
I + +IEV TP+G D+L+++E+I+VK+ WK+AV Q++ Y HYY P+H+K ++LF Q S QL C I+VT++
Sbjct: 140 IGKLANPVIEVNTPAGKIDILTDHEIIEVKNVLGWKSAVGQILIYSHYY-PNHQKIIHLFGQ----CCSNTKQLIKFHCGEFNIQVTWQ 223
BLAST of mRNA_F-serratus_M_contig6469.17410.1 vs. uniprot
Match: UPI001391CB9F (hypothetical protein n=1 Tax=Nostoc sp. B(2019) TaxID=2690446 RepID=UPI001391CB9F) HSP 1 Score: 63.2 bits (152), Expect = 4.700e-10 Identity = 31/82 (37.80%), Postives = 54/82 (65.85%), Query Frame = 1
Query: 22 MIEVPTPSGSKDVLSENEVIDVKHYRSWKNAVVQVIAYGHYYYPSHKKRLNLFAQEGDKIASKYLQLATPVCSANGIEVTFE 267
++EV TP G D+L++ E+I+VK +WK+AV Q++ YGHYY P+H+KR++LF + + + Q+ C I++T++
Sbjct: 147 VVEVNTPVGKIDILTDYEIIEVKKASAWKSAVGQILVYGHYY-PNHQKRIHLFGE----CSVRTKQIIHTHCDQFNIQLTWQ 223
BLAST of mRNA_F-serratus_M_contig6469.17410.1 vs. uniprot
Match: A0A2P8QK91_9CYAN (Uncharacterized protein n=2 Tax=Chroococcidiopsidales TaxID=1890505 RepID=A0A2P8QK91_9CYAN) HSP 1 Score: 61.6 bits (148), Expect = 1.220e-9 Identity = 32/86 (37.21%), Postives = 52/86 (60.47%), Query Frame = 1
Query: 10 RLGAMIEVPTPSGSKDVLSENEVIDVKHYRSWKNAVVQVIAYGHYYYPSHKKRLNLFAQEGDKIASKYLQLATPVCSANGIEVTFE 267
+LG ++EV TP+G D+L++ ++I++K + WK A+ Q +AY +Y P H+KR++LF G K L C G++VT E
Sbjct: 108 QLGGLVEVVTPAGRIDLLTDTQIIEIKSIQDWKAALGQTLAYSGFY-PEHQKRIHLF---GSAFELKRLSDIEAACLCFGVKVTGE 189
BLAST of mRNA_F-serratus_M_contig6469.17410.1 vs. uniprot
Match: A0A1Z4KCX8_9CYAN (DNA-damage-inducible protein n=1 Tax=Calothrix brevissima NIES-22 TaxID=1973478 RepID=A0A1Z4KCX8_9CYAN) HSP 1 Score: 60.5 bits (145), Expect = 3.640e-9 Identity = 35/89 (39.33%), Postives = 54/89 (60.67%), Query Frame = 1
Query: 1 ISRRLGAMIEVPTPSGSKDVLSENEVIDVKHYRSWKNAVVQVIAYGHYYYPSHKKRLNLFAQEGDKIASKYLQLATPVCSANGIEVTFE 267
+ ++LG EV TP+G D+L++ ++I+VK SWK AV QV Y YY P H+KR++LF K ++L++ C+ I VT+E
Sbjct: 116 LQKKLGGTREVQTPAGFIDLLTDEQIIEVKKVNSWKAAVGQVEIYRDYY-PFHEKRIHLFG----KCHPEFLKIVIFHCTKRKIIVTWE 199
BLAST of mRNA_F-serratus_M_contig6469.17410.1 vs. uniprot
Match: A0A2P8QSC9_9CYAN (Uncharacterized protein n=1 Tax=Chroococcidiopsis sp. CCALA 051 TaxID=869949 RepID=A0A2P8QSC9_9CYAN) HSP 1 Score: 58.9 bits (141), Expect = 1.080e-8 Identity = 28/71 (39.44%), Postives = 47/71 (66.20%), Query Frame = 1
Query: 13 LGAMIEVPTPSGSKDVLSENEVIDVKHYRSWKNAVVQVIAYGHYYYPSHKKRLNLFAQEGDKIASKYLQLA 225
LG ++EV TP+G D+L++ E+I+VK + WK A+ Q++ Y +Y P H+KRL+LF +A +++A
Sbjct: 98 LGGLVEVITPAGRIDLLTDTEIIEVKAVKDWKAALGQILVYSGFY-PQHQKRLHLFGTASALLALADIEVA 167
BLAST of mRNA_F-serratus_M_contig6469.17410.1 vs. uniprot
Match: A0A2P8QSB1_9CYAN (Uncharacterized protein n=1 Tax=Chroococcidiopsis sp. CCALA 051 TaxID=869949 RepID=A0A2P8QSB1_9CYAN) HSP 1 Score: 57.8 bits (138), Expect = 2.980e-8 Identity = 25/56 (44.64%), Postives = 40/56 (71.43%), Query Frame = 1
Query: 13 LGAMIEVPTPSGSKDVLSENEVIDVKHYRSWKNAVVQVIAYGHYYYPSHKKRLNLF 180
LG ++EV TP+G D+L+ E+I++K + WK A+ Q++ Y +Y P H+KRL+LF
Sbjct: 100 LGGLVEVATPAGRNDLLTNAEIIEIKAIKDWKAALGQILVYSGFY-PQHQKRLHLF 154
BLAST of mRNA_F-serratus_M_contig6469.17410.1 vs. uniprot
Match: UPI0006982661 (MarR family transcriptional regulator n=1 Tax=Aliterella atlantica TaxID=1827278 RepID=UPI0006982661) HSP 1 Score: 57.0 bits (136), Expect = 6.850e-8 Identity = 25/57 (43.86%), Postives = 41/57 (71.93%), Query Frame = 1
Query: 10 RLGAMIEVPTPSGSKDVLSENEVIDVKHYRSWKNAVVQVIAYGHYYYPSHKKRLNLF 180
+LG ++EV TP+G D+L+ +E+ +VK + WK A+ Q++ Y +Y P H+KRL+LF
Sbjct: 110 QLGGLVEVATPAGRIDLLTNSEITEVKAIKDWKAALGQILVYSSFY-PQHQKRLHLF 165
BLAST of mRNA_F-serratus_M_contig6469.17410.1 vs. uniprot
Match: UPI00036DC0B9 (hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 TaxID=1173028 RepID=UPI00036DC0B9) HSP 1 Score: 57.4 bits (137), Expect = 8.130e-8 Identity = 28/60 (46.67%), Postives = 42/60 (70.00%), Query Frame = 1
Query: 1 ISRRLGAMIEVPTPSGSKDVLSENEVIDVKHYRSWKNAVVQVIAYGHYYYPSHKKRLNLF 180
+ ++LG EV TP+G D+L+ ++I+VK + WK A+ QV YG YY PSH+KR++LF
Sbjct: 160 LKKKLGGETEVFTPAGLIDLLTAEQLIEVKEVKRWKCAIGQVETYGDYY-PSHQKRIHLF 218 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6469.17410.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6469.17410.1 >prot_F-serratus_M_contig6469.17410.1 ID=prot_F-serratus_M_contig6469.17410.1|Name=mRNA_F-serratus_M_contig6469.17410.1|organism=Fucus serratus male|type=polypeptide|length=82bp MIEVPTPSGSKDVLSENEVIDVKHYRSWKNAVVQVIAYGHYYYPSHKKRLback to top mRNA from alignment at F-serratus_M_contig6469:8810..9076- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6469.17410.1 ID=mRNA_F-serratus_M_contig6469.17410.1|Name=mRNA_F-serratus_M_contig6469.17410.1|organism=Fucus serratus male|type=mRNA|length=267bp|location=Sequence derived from alignment at F-serratus_M_contig6469:8810..9076- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6469:8810..9076- >mRNA_F-serratus_M_contig6469.17410.1 ID=mRNA_F-serratus_M_contig6469.17410.1|Name=mRNA_F-serratus_M_contig6469.17410.1|organism=Fucus serratus male|type=CDS|length=492bp|location=Sequence derived from alignment at F-serratus_M_contig6469:8810..9076- (Fucus serratus male)back to top |