mRNA_F-serratus_M_contig6323.17205.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig6323.17205.1 vs. uniprot
Match: A0A6H5KCI0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI0_9PHAE) HSP 1 Score: 295 bits (755), Expect = 2.600e-85 Identity = 146/226 (64.60%), Postives = 179/226 (79.20%), Query Frame = 3
Query: 6 RPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLKRSLACLKYFDDNLPSDGVPPADFDAPVSATDNGKDSSATAIVASALLEIYAETGESKYLAWAEKYLSAVLTADYYLPNATDGYQSILRRATAKWGET--ERGAVFGDYFVLEAMVRYRQL 677
RP+W+RAVNVDM+MN+EI+LWA +NGG E VA HAD+TWKDIVR+D ST HVA YD DTG+L+E GTYQGY ++STWTRGQAWA+YG M+YR+L E +FL RS+ L+Y++DNLP D +PPADFDAP SATDNGKDSSA AIV+S LLE++ ET + YL ++ YLSA+ Y P+ATDGYQSILRRA +WG+ E GAVFGDYF LE MVRY++L
Sbjct: 217 RPDWDRAVNVDMMMNLEILLWAGLNGGEDHELE-VAGHADSTWKDIVREDNSTNHVAAYDIDTGELIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLEYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETEDPTYLVKSQTYLSALFAGTCYQPDATDGYQSILRRAMREWGDEDGEIGAVFGDYFFLETMVRYQKL 441
BLAST of mRNA_F-serratus_M_contig6323.17205.1 vs. uniprot
Match: A0A6H5JQV0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV0_9PHAE) HSP 1 Score: 287 bits (735), Expect = 6.120e-85 Identity = 140/226 (61.95%), Postives = 181/226 (80.09%), Query Frame = 3
Query: 3 SRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLKRSLACLKYFDDNLPSDGVPPADFDAPVSATDNGKDSSATAIVASALLEIYAETGESKYLAWAEKYL-SAVLTADYYLPNATDGYQSILRRATAKWGETERGAVFGDYFVLEAMVRYRQL 677
+ P+WERAVNVDMIMNMEIMLWA+VNGG+ Y++ V +HADTTW D+VRDDYST+HVADYDP TG+LV++GTYQG+ D+STW+RGQAWA+YG M+YRYL+E +FL ++ L YF DNLP D VP ADFDAPV + DN KDSSATAIV SAL E++ TGE YL A+++L S +L++ Y+ +ATDG+Q+ILR + A WG+ G+V DYF+LE+MVRY+ +
Sbjct: 91 NEPQWERAVNVDMIMNMEIMLWAAVNGGDAEYSDAVENHADTTWADLVRDDYSTYHVADYDPSTGELVDKGTYQGWQDDSTWSRGQAWAIYGFTMVYRYLKEQRFLDYAINTLSYFVDNLPDDNVPYADFDAPVDS-DNPKDSSATAIVTSALFELFELTGEPTYLEKAQEFLTSLLLSSTYFDSSATDGWQAILRNSAAAWGDEAVGSVTADYFLLESMVRYKTM 315
BLAST of mRNA_F-serratus_M_contig6323.17205.1 vs. uniprot
Match: D7FQV4_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV4_ECTSI) HSP 1 Score: 289 bits (740), Expect = 7.830e-85 Identity = 142/224 (63.39%), Postives = 183/224 (81.70%), Query Frame = 3
Query: 9 PEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLKRSLACLKYFDDNLPSDGVPPADFDAPVSATDNGKDSSATAIVASALLEIYAETGESKYLAWAEKYLSAVL-TADYYLPNATDGYQSILRRATAKWGETERGAVFGDYFVLEAMVRYRQL 677
P+WERAVNVDMIMNMEIMLWA+ NGG+T Y++ V +HADTTW D+VR+DYST+HVADYDP TGDL ++GTYQG+ D+STW+RGQAWAVYG M++RYL++ +FL RS+ L YF DNLP D VP ADFDAP ++ DN KDSSATAIVASAL E++ TGE YL A+++LS++L ++ Y+ +ATDG+Q++LR + A WGE G+V GDYF+LEAMVRY+ +
Sbjct: 93 PQWERAVNVDMIMNMEIMLWAANNGGDTDYSDAVENHADTTWADLVREDYSTYHVADYDPSTGDLEDKGTYQGWQDDSTWSRGQAWAVYGFAMVHRYLKDERFLDRSILTLGYFVDNLPDDNVPYADFDAPENS-DNPKDSSATAIVASALFELFELTGEPTYLEKAQEFLSSLLLSSTYFDSSATDGWQALLRESAAAWGEDSVGSVTGDYFLLEAMVRYKTM 315
BLAST of mRNA_F-serratus_M_contig6323.17205.1 vs. uniprot
Match: D7FUJ9_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ9_ECTSI) HSP 1 Score: 285 bits (728), Expect = 2.780e-83 Identity = 147/271 (54.24%), Postives = 196/271 (72.32%), Query Frame = 3
Query: 3 SRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLKRSLACLKYFDDNLPSDGVPPADFDAPVSATDNGKDSSATAIVASALLEIYAETGESKYLAWAEKYLSAVLTA-DYYLPNATDGYQSILRRATAKWGETERGAVFGDYFVLEAMVRYRQLTR*TLCTAQTVGTFCTRTSRRKVTDSVPSTGFLYIFDGRARNNAV 812
S P+WERAVNVDMIMNMEIMLWA+VN G+ Y++ +HADTTW D+VRDDYSTFHVADY+ TG+LV++GTYQG+ D+STW+RGQAWA+YG +M++RYLQ+P+FL + L YF DNLP D VP ADFDAPV + DN KDSSATAIV SAL E++ +TGE YL +++LS++L + +Y+ +ATDG+Q+ILR + A WG+ G+V DYF+LE+MVRY+ ++ + +T +TD+ PS F G A +N V
Sbjct: 149 SEPQWERAVNVDMIMNMEIMLWAAVNDGDAEYSDAAENHADTTWADLVRDDYSTFHVADYNKSTGELVDKGTYQGWQDDSTWSRGQAWAIYGFIMVHRYLQKPRFLDYGINTLSYFVDNLPDDNVPYADFDAPVDS-DNPKDSSATAIVTSALFELFEQTGEPSYLEKGQEFLSSLLLSPNYFDSSATDGWQAILRNSAAAWGDAAVGSVTADYFLLESMVRYQTMSPSIILRNET---------EVSITDTQPS----VEFSGTALDNDV 405
BLAST of mRNA_F-serratus_M_contig6323.17205.1 vs. uniprot
Match: D8LHN8_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHN8_ECTSI) HSP 1 Score: 225 bits (574), Expect = 1.030e-63 Identity = 108/160 (67.50%), Postives = 131/160 (81.88%), Query Frame = 3
Query: 6 RPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLKRSLACLKYFDDNLPSDGVPPADFDAPVSATDNGKDSSATAIVASALLEIYAETG 485
RP+W+RAVNVDM+MN+EI+LWA +NGG E V HAD+TWKDIVR+D ST HVA YD DTG+ +E GTYQGY ++STWTRGQAWA+YG M+YR+L E +FL RS+ LKY++DNLP D +PPADFDAP SATDNGKDSSA AIV+S LLE++ ETG
Sbjct: 180 RPDWDRAVNVDMMMNLEILLWAGLNGGEDHELE-VEGHADSTWKDIVREDNSTNHVAAYDIDTGEFIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLKYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETG 338
BLAST of mRNA_F-serratus_M_contig6323.17205.1 vs. uniprot
Match: A0A6N6ZAI7_9BACT (Putative unsaturated glucuronyl hydrolase n=1 Tax=Puniceicoccaceae bacterium 5H TaxID=2508868 RepID=A0A6N6ZAI7_9BACT) HSP 1 Score: 215 bits (547), Expect = 1.070e-58 Identity = 117/217 (53.92%), Postives = 153/217 (70.51%), Query Frame = 3
Query: 27 VNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLKRSLACLKYF---DDNLPSDGVPPADFDAPVSATDNGKDSSATAIVASALLEIYAETGESKYLAWAEKYLSAVLTADYYLPNATDGYQSILRRATAKWGETERGAVFGDYFVLEAMVRY 668
VN+DM+MNMEI+LWAS +GGNT +A+ HAD +W+D+VRDDYSTFHV DY+ D G + + T+QG+ +STW+RGQAWAVYG M+YRY Q P+ L+R+ YF + D VP +DFDAP+ + +N +D+SA AIVASA LE+Y TGE KYL AE L++ LT YL TD Y+S+L + + KWGE E GAV GDY+ +EAM RY
Sbjct: 178 VNIDMMMNMEIILWASQHGGNTAWADAAISHADASWEDLVRDDYSTFHVVDYNLD-GSVDSKRTHQGWKTDSTWSRGQAWAVYGYTMLYRYTQLPRMLERAEHTFDYFMTATEAQVDDYVPYSDFDAPIDS-ENPRDTSAAAIVASAALELYQTTGEQKYLTAAENMLNS-LTQAPYLSIGTD-YESVLAKGSEKWGEPEVGAVTGDYYFIEAMWRY 390
BLAST of mRNA_F-serratus_M_contig6323.17205.1 vs. uniprot
Match: R9PSV9_AGAAL (Putative unsaturated glucuronyl hydrolase n=4 Tax=Agarivorans TaxID=261825 RepID=R9PSV9_AGAAL) HSP 1 Score: 184 bits (466), Expect = 9.090e-48 Identity = 98/219 (44.75%), Postives = 144/219 (65.75%), Query Frame = 3
Query: 27 VNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLKRSLACLKYFDDNLPS---DGVPPADFDAPVSATDNGKDSSATAIVASALLEIYAETGESKYLAWAEKYLSAVLTADYYLPNATDGYQSILRRATAKWGETERGAVFGDYFVLEAMVRYRQ 674
VN+D +MNME++LW + + + HAD TW+ VR++ ST+HV Y P +G++V++ T+QG+ STW+RGQAW+VY M YRY + L+RS+ +YF ++ D VP +DFDAP+ DN +DSSATAIVASAL+E+Y T + KYL A++ L+++ T Y + + YQSIL + + KWGE E G +FGDYF +EA+ R++Q
Sbjct: 186 VNIDQLMNMELVLWVGKHANKPEFTKMAISHADKTWEHGVRENGSTYHVVSYSP-SGEVVKKRTHQGWKTESTWSRGQAWSVYAYAMYYRYTGLERMLERSIKSYEYFIESTKQQTQDLVPYSDFDAPID-DDNPRDSSATAIVASALIELYKITQQEKYLNDAQQMLASLSTPKYLAMD--NNYQSILLKGSEKWGEPEVGTIFGDYFFIEALYRWQQ 400
BLAST of mRNA_F-serratus_M_contig6323.17205.1 vs. uniprot
Match: UPI00200F5605 (glycoside hydrolase family 88 protein n=1 Tax=Agarivorans sp. TSD2052 TaxID=2937286 RepID=UPI00200F5605) HSP 1 Score: 183 bits (465), Expect = 1.090e-47 Identity = 101/219 (46.12%), Postives = 139/219 (63.47%), Query Frame = 3
Query: 27 VNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLKRSLACLKYFDDNLP---SDGVPPADFDAPVSATDNGKDSSATAIVASALLEIYAETGESKYLAWAEKYLSAVLTADYYLPNATDGYQSILRRATAKWGETERGAVFGDYFVLEAMVRYRQ 674
VN+D +MNME++LW N Y E HAD TW+ +R + ST+HV Y D G +V++ T+QG+ +STW+RGQAW+VY M YRY + L+RS+ +YF + D +P ADFDAP+ N +DSSATAIVASALLE+Y T E KYL AE L+++ T ++ + YQSIL + + KWGE E G +FGDYF +EA+ R++Q
Sbjct: 180 VNIDQLMNMELILWVGQNADKPDYTEMAISHADKTWEHNLRKNASTYHVVGYGLD-GKVVDKRTHQGWKADSTWSRGQAWSVYAYAMYYRYTGLERMLERSIKSYEYFIEATKLQTQDFIPYADFDAPIDDK-NPRDSSATAIVASALLELYKITNEEKYLVDAESMLTSLATPEFLAMDPE--YQSILLKGSEKWGEEEVGTIFGDYFFIEALYRWQQ 394
BLAST of mRNA_F-serratus_M_contig6323.17205.1 vs. uniprot
Match: UPI001F1B9B3F (glycoside hydrolase family 88 protein n=1 Tax=Vibrio hippocampi TaxID=654686 RepID=UPI001F1B9B3F) HSP 1 Score: 177 bits (450), Expect = 1.520e-45 Identity = 98/219 (44.75%), Postives = 138/219 (63.01%), Query Frame = 3
Query: 27 VNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLKRSLACLKYF---DDNLPSDGVPPADFDAPVSATDNGKDSSATAIVASALLEIYAETGESKYLAWAEKYLSAVLTADYYLPNATDGYQSILRRATAKWGETERGAVFGDYFVLEAMVRYRQ 674
VN+D +MNME++LW N Y + HAD TW+ VRD+ ST+HV Y+ D G + + T+QG+ +STW+RGQAW+VY M YR+ + L+RS+ YF +D VP +DFDAP+ N KD+SATA+VAS LLE+Y T + KYL AE L ++ +Y L T+ YQ+IL++ + KWGE E G +FGDYF +EA+ R++Q
Sbjct: 185 VNIDQLMNMELVLWVGANADKPEYTQMAVSHADKTWQHGVRDNGSTYHVVSYNLD-GSVDSKRTHQGWQTDSTWSRGQAWSVYAYAMYYRFTGLERMLERSIKSYDYFLSATQQQTNDLVPYSDFDAPIDVR-NPKDTSATAVVASGLLELYHITKDEKYLNDAEAMLISLAKPEY-LARETE-YQAILKKGSEKWGEPEVGTIFGDYFFIEALYRWKQ 399
BLAST of mRNA_F-serratus_M_contig6323.17205.1 vs. uniprot
Match: A0A4Y7ZV10_9GAMM (Glucuronyl hydrolase n=2 Tax=Psychromonas sp. RZ22 TaxID=2555643 RepID=A0A4Y7ZV10_9GAMM) HSP 1 Score: 177 bits (450), Expect = 1.740e-45 Identity = 101/221 (45.70%), Postives = 141/221 (63.80%), Query Frame = 3
Query: 27 VNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLKRSLACLKYFDD---NLPSDGVPPADFDAPVSATDNGKDSSATAIVASALLEIYAETGESKYLAWAEKYLSAVLTADYYLPNATDGYQSILRRATAKWGETERGAVFGDYFVLEAMVRYRQLT 680
VN+D +MNME++LW N Y + HAD TW + VR++ ST+HV Y+ G +V++ T+QG+ STW+RGQAWAVY M YRY + L+RS +Y+ + +D VP ADFDAP+ DN +DSSA AIVASAL+E+Y T E +YL A+ L+++ T Y L N D Y+SIL + + KWGE E G++FGDYF +EA+ R++ T
Sbjct: 192 VNIDQLMNMELVLWVGKNADKPEYTQMAISHADKTWANNVRENGSTYHVVSYNSQ-GQVVKKRTHQGWKTESTWSRGQAWAVYAYAMYYRYTGLDRMLERSKKSYQYYLEATKKQTNDLVPYADFDAPLDK-DNPRDSSAAAIVASALIELYKITKEEQYLNDAQAMLNSLATPTY-LANNPD-YESILLKGSEKWGEPEVGSIFGDYFFVEALYRWKVWT 408 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6323.17205.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig6323.17205.1 >prot_F-serratus_M_contig6323.17205.1 ID=prot_F-serratus_M_contig6323.17205.1|Name=mRNA_F-serratus_M_contig6323.17205.1|organism=Fucus serratus male|type=polypeptide|length=216bp MIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPback to top mRNA from alignment at F-serratus_M_contig6323:13818..17307- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig6323.17205.1 ID=mRNA_F-serratus_M_contig6323.17205.1|Name=mRNA_F-serratus_M_contig6323.17205.1|organism=Fucus serratus male|type=mRNA|length=3490bp|location=Sequence derived from alignment at F-serratus_M_contig6323:13818..17307- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig6323:13818..17307- >mRNA_F-serratus_M_contig6323.17205.1 ID=mRNA_F-serratus_M_contig6323.17205.1|Name=mRNA_F-serratus_M_contig6323.17205.1|organism=Fucus serratus male|type=CDS|length=1296bp|location=Sequence derived from alignment at F-serratus_M_contig6323:13818..17307- (Fucus serratus male)back to top |