mRNA_F-serratus_M_contig6323.17205.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig6323.17205.1
Unique NamemRNA_F-serratus_M_contig6323.17205.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig6323.17205.1 vs. uniprot
Match: A0A6H5KCI0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCI0_9PHAE)

HSP 1 Score: 295 bits (755), Expect = 2.600e-85
Identity = 146/226 (64.60%), Postives = 179/226 (79.20%), Query Frame = 3
Query:    6 RPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLKRSLACLKYFDDNLPSDGVPPADFDAPVSATDNGKDSSATAIVASALLEIYAETGESKYLAWAEKYLSAVLTADYYLPNATDGYQSILRRATAKWGET--ERGAVFGDYFVLEAMVRYRQL 677
            RP+W+RAVNVDM+MN+EI+LWA +NGG     E VA HAD+TWKDIVR+D ST HVA YD DTG+L+E GTYQGY ++STWTRGQAWA+YG  M+YR+L E +FL RS+  L+Y++DNLP D +PPADFDAP SATDNGKDSSA AIV+S LLE++ ET +  YL  ++ YLSA+     Y P+ATDGYQSILRRA  +WG+   E GAVFGDYF LE MVRY++L
Sbjct:  217 RPDWDRAVNVDMMMNLEILLWAGLNGGEDHELE-VAGHADSTWKDIVREDNSTNHVAAYDIDTGELIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLEYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETEDPTYLVKSQTYLSALFAGTCYQPDATDGYQSILRRAMREWGDEDGEIGAVFGDYFFLETMVRYQKL 441          
BLAST of mRNA_F-serratus_M_contig6323.17205.1 vs. uniprot
Match: A0A6H5JQV0_9PHAE (GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV0_9PHAE)

HSP 1 Score: 287 bits (735), Expect = 6.120e-85
Identity = 140/226 (61.95%), Postives = 181/226 (80.09%), Query Frame = 3
Query:    3 SRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLKRSLACLKYFDDNLPSDGVPPADFDAPVSATDNGKDSSATAIVASALLEIYAETGESKYLAWAEKYL-SAVLTADYYLPNATDGYQSILRRATAKWGETERGAVFGDYFVLEAMVRYRQL 677
            + P+WERAVNVDMIMNMEIMLWA+VNGG+  Y++ V +HADTTW D+VRDDYST+HVADYDP TG+LV++GTYQG+ D+STW+RGQAWA+YG  M+YRYL+E +FL  ++  L YF DNLP D VP ADFDAPV + DN KDSSATAIV SAL E++  TGE  YL  A+++L S +L++ Y+  +ATDG+Q+ILR + A WG+   G+V  DYF+LE+MVRY+ +
Sbjct:   91 NEPQWERAVNVDMIMNMEIMLWAAVNGGDAEYSDAVENHADTTWADLVRDDYSTYHVADYDPSTGELVDKGTYQGWQDDSTWSRGQAWAIYGFTMVYRYLKEQRFLDYAINTLSYFVDNLPDDNVPYADFDAPVDS-DNPKDSSATAIVTSALFELFELTGEPTYLEKAQEFLTSLLLSSTYFDSSATDGWQAILRNSAAAWGDEAVGSVTADYFLLESMVRYKTM 315          
BLAST of mRNA_F-serratus_M_contig6323.17205.1 vs. uniprot
Match: D7FQV4_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV4_ECTSI)

HSP 1 Score: 289 bits (740), Expect = 7.830e-85
Identity = 142/224 (63.39%), Postives = 183/224 (81.70%), Query Frame = 3
Query:    9 PEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLKRSLACLKYFDDNLPSDGVPPADFDAPVSATDNGKDSSATAIVASALLEIYAETGESKYLAWAEKYLSAVL-TADYYLPNATDGYQSILRRATAKWGETERGAVFGDYFVLEAMVRYRQL 677
            P+WERAVNVDMIMNMEIMLWA+ NGG+T Y++ V +HADTTW D+VR+DYST+HVADYDP TGDL ++GTYQG+ D+STW+RGQAWAVYG  M++RYL++ +FL RS+  L YF DNLP D VP ADFDAP ++ DN KDSSATAIVASAL E++  TGE  YL  A+++LS++L ++ Y+  +ATDG+Q++LR + A WGE   G+V GDYF+LEAMVRY+ +
Sbjct:   93 PQWERAVNVDMIMNMEIMLWAANNGGDTDYSDAVENHADTTWADLVREDYSTYHVADYDPSTGDLEDKGTYQGWQDDSTWSRGQAWAVYGFAMVHRYLKDERFLDRSILTLGYFVDNLPDDNVPYADFDAPENS-DNPKDSSATAIVASALFELFELTGEPTYLEKAQEFLSSLLLSSTYFDSSATDGWQALLRESAAAWGEDSVGSVTGDYFLLEAMVRYKTM 315          
BLAST of mRNA_F-serratus_M_contig6323.17205.1 vs. uniprot
Match: D7FUJ9_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ9_ECTSI)

HSP 1 Score: 285 bits (728), Expect = 2.780e-83
Identity = 147/271 (54.24%), Postives = 196/271 (72.32%), Query Frame = 3
Query:    3 SRPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLKRSLACLKYFDDNLPSDGVPPADFDAPVSATDNGKDSSATAIVASALLEIYAETGESKYLAWAEKYLSAVLTA-DYYLPNATDGYQSILRRATAKWGETERGAVFGDYFVLEAMVRYRQLTR*TLCTAQTVGTFCTRTSRRKVTDSVPSTGFLYIFDGRARNNAV 812
            S P+WERAVNVDMIMNMEIMLWA+VN G+  Y++   +HADTTW D+VRDDYSTFHVADY+  TG+LV++GTYQG+ D+STW+RGQAWA+YG +M++RYLQ+P+FL   +  L YF DNLP D VP ADFDAPV + DN KDSSATAIV SAL E++ +TGE  YL   +++LS++L + +Y+  +ATDG+Q+ILR + A WG+   G+V  DYF+LE+MVRY+ ++   +   +T            +TD+ PS      F G A +N V
Sbjct:  149 SEPQWERAVNVDMIMNMEIMLWAAVNDGDAEYSDAAENHADTTWADLVRDDYSTFHVADYNKSTGELVDKGTYQGWQDDSTWSRGQAWAIYGFIMVHRYLQKPRFLDYGINTLSYFVDNLPDDNVPYADFDAPVDS-DNPKDSSATAIVTSALFELFEQTGEPSYLEKGQEFLSSLLLSPNYFDSSATDGWQAILRNSAAAWGDAAVGSVTADYFLLESMVRYQTMSPSIILRNET---------EVSITDTQPS----VEFSGTALDNDV 405          
BLAST of mRNA_F-serratus_M_contig6323.17205.1 vs. uniprot
Match: D8LHN8_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHN8_ECTSI)

HSP 1 Score: 225 bits (574), Expect = 1.030e-63
Identity = 108/160 (67.50%), Postives = 131/160 (81.88%), Query Frame = 3
Query:    6 RPEWERAVNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLKRSLACLKYFDDNLPSDGVPPADFDAPVSATDNGKDSSATAIVASALLEIYAETG 485
            RP+W+RAVNVDM+MN+EI+LWA +NGG     E V  HAD+TWKDIVR+D ST HVA YD DTG+ +E GTYQGY ++STWTRGQAWA+YG  M+YR+L E +FL RS+  LKY++DNLP D +PPADFDAP SATDNGKDSSA AIV+S LLE++ ETG
Sbjct:  180 RPDWDRAVNVDMMMNLEILLWAGLNGGEDHELE-VEGHADSTWKDIVREDNSTNHVAAYDIDTGEFIETGTYQGYTNSSTWTRGQAWAIYGYAMVYRFLPEQRFLDRSIGLLKYYEDNLPEDLIPPADFDAPESATDNGKDSSAAAIVSSGLLELFLETG 338          
BLAST of mRNA_F-serratus_M_contig6323.17205.1 vs. uniprot
Match: A0A6N6ZAI7_9BACT (Putative unsaturated glucuronyl hydrolase n=1 Tax=Puniceicoccaceae bacterium 5H TaxID=2508868 RepID=A0A6N6ZAI7_9BACT)

HSP 1 Score: 215 bits (547), Expect = 1.070e-58
Identity = 117/217 (53.92%), Postives = 153/217 (70.51%), Query Frame = 3
Query:   27 VNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLKRSLACLKYF---DDNLPSDGVPPADFDAPVSATDNGKDSSATAIVASALLEIYAETGESKYLAWAEKYLSAVLTADYYLPNATDGYQSILRRATAKWGETERGAVFGDYFVLEAMVRY 668
            VN+DM+MNMEI+LWAS +GGNT +A+    HAD +W+D+VRDDYSTFHV DY+ D G +  + T+QG+  +STW+RGQAWAVYG  M+YRY Q P+ L+R+     YF    +    D VP +DFDAP+ + +N +D+SA AIVASA LE+Y  TGE KYL  AE  L++ LT   YL   TD Y+S+L + + KWGE E GAV GDY+ +EAM RY
Sbjct:  178 VNIDMMMNMEIILWASQHGGNTAWADAAISHADASWEDLVRDDYSTFHVVDYNLD-GSVDSKRTHQGWKTDSTWSRGQAWAVYGYTMLYRYTQLPRMLERAEHTFDYFMTATEAQVDDYVPYSDFDAPIDS-ENPRDTSAAAIVASAALELYQTTGEQKYLTAAENMLNS-LTQAPYLSIGTD-YESVLAKGSEKWGEPEVGAVTGDYYFIEAMWRY 390          
BLAST of mRNA_F-serratus_M_contig6323.17205.1 vs. uniprot
Match: R9PSV9_AGAAL (Putative unsaturated glucuronyl hydrolase n=4 Tax=Agarivorans TaxID=261825 RepID=R9PSV9_AGAAL)

HSP 1 Score: 184 bits (466), Expect = 9.090e-48
Identity = 98/219 (44.75%), Postives = 144/219 (65.75%), Query Frame = 3
Query:   27 VNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLKRSLACLKYFDDNLPS---DGVPPADFDAPVSATDNGKDSSATAIVASALLEIYAETGESKYLAWAEKYLSAVLTADYYLPNATDGYQSILRRATAKWGETERGAVFGDYFVLEAMVRYRQ 674
            VN+D +MNME++LW   +     + +    HAD TW+  VR++ ST+HV  Y P +G++V++ T+QG+   STW+RGQAW+VY   M YRY    + L+RS+   +YF ++      D VP +DFDAP+   DN +DSSATAIVASAL+E+Y  T + KYL  A++ L+++ T  Y   +  + YQSIL + + KWGE E G +FGDYF +EA+ R++Q
Sbjct:  186 VNIDQLMNMELVLWVGKHANKPEFTKMAISHADKTWEHGVRENGSTYHVVSYSP-SGEVVKKRTHQGWKTESTWSRGQAWSVYAYAMYYRYTGLERMLERSIKSYEYFIESTKQQTQDLVPYSDFDAPID-DDNPRDSSATAIVASALIELYKITQQEKYLNDAQQMLASLSTPKYLAMD--NNYQSILLKGSEKWGEPEVGTIFGDYFFIEALYRWQQ 400          
BLAST of mRNA_F-serratus_M_contig6323.17205.1 vs. uniprot
Match: UPI00200F5605 (glycoside hydrolase family 88 protein n=1 Tax=Agarivorans sp. TSD2052 TaxID=2937286 RepID=UPI00200F5605)

HSP 1 Score: 183 bits (465), Expect = 1.090e-47
Identity = 101/219 (46.12%), Postives = 139/219 (63.47%), Query Frame = 3
Query:   27 VNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLKRSLACLKYFDDNLP---SDGVPPADFDAPVSATDNGKDSSATAIVASALLEIYAETGESKYLAWAEKYLSAVLTADYYLPNATDGYQSILRRATAKWGETERGAVFGDYFVLEAMVRYRQ 674
            VN+D +MNME++LW   N     Y E    HAD TW+  +R + ST+HV  Y  D G +V++ T+QG+  +STW+RGQAW+VY   M YRY    + L+RS+   +YF +       D +P ADFDAP+    N +DSSATAIVASALLE+Y  T E KYL  AE  L+++ T ++   +    YQSIL + + KWGE E G +FGDYF +EA+ R++Q
Sbjct:  180 VNIDQLMNMELILWVGQNADKPDYTEMAISHADKTWEHNLRKNASTYHVVGYGLD-GKVVDKRTHQGWKADSTWSRGQAWSVYAYAMYYRYTGLERMLERSIKSYEYFIEATKLQTQDFIPYADFDAPIDDK-NPRDSSATAIVASALLELYKITNEEKYLVDAESMLTSLATPEFLAMDPE--YQSILLKGSEKWGEEEVGTIFGDYFFIEALYRWQQ 394          
BLAST of mRNA_F-serratus_M_contig6323.17205.1 vs. uniprot
Match: UPI001F1B9B3F (glycoside hydrolase family 88 protein n=1 Tax=Vibrio hippocampi TaxID=654686 RepID=UPI001F1B9B3F)

HSP 1 Score: 177 bits (450), Expect = 1.520e-45
Identity = 98/219 (44.75%), Postives = 138/219 (63.01%), Query Frame = 3
Query:   27 VNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLKRSLACLKYF---DDNLPSDGVPPADFDAPVSATDNGKDSSATAIVASALLEIYAETGESKYLAWAEKYLSAVLTADYYLPNATDGYQSILRRATAKWGETERGAVFGDYFVLEAMVRYRQ 674
            VN+D +MNME++LW   N     Y +    HAD TW+  VRD+ ST+HV  Y+ D G +  + T+QG+  +STW+RGQAW+VY   M YR+    + L+RS+    YF        +D VP +DFDAP+    N KD+SATA+VAS LLE+Y  T + KYL  AE  L ++   +Y L   T+ YQ+IL++ + KWGE E G +FGDYF +EA+ R++Q
Sbjct:  185 VNIDQLMNMELVLWVGANADKPEYTQMAVSHADKTWQHGVRDNGSTYHVVSYNLD-GSVDSKRTHQGWQTDSTWSRGQAWSVYAYAMYYRFTGLERMLERSIKSYDYFLSATQQQTNDLVPYSDFDAPIDVR-NPKDTSATAVVASGLLELYHITKDEKYLNDAEAMLISLAKPEY-LARETE-YQAILKKGSEKWGEPEVGTIFGDYFFIEALYRWKQ 399          
BLAST of mRNA_F-serratus_M_contig6323.17205.1 vs. uniprot
Match: A0A4Y7ZV10_9GAMM (Glucuronyl hydrolase n=2 Tax=Psychromonas sp. RZ22 TaxID=2555643 RepID=A0A4Y7ZV10_9GAMM)

HSP 1 Score: 177 bits (450), Expect = 1.740e-45
Identity = 101/221 (45.70%), Postives = 141/221 (63.80%), Query Frame = 3
Query:   27 VNVDMIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDPDTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLKRSLACLKYFDD---NLPSDGVPPADFDAPVSATDNGKDSSATAIVASALLEIYAETGESKYLAWAEKYLSAVLTADYYLPNATDGYQSILRRATAKWGETERGAVFGDYFVLEAMVRYRQLT 680
            VN+D +MNME++LW   N     Y +    HAD TW + VR++ ST+HV  Y+   G +V++ T+QG+   STW+RGQAWAVY   M YRY    + L+RS    +Y+ +      +D VP ADFDAP+   DN +DSSA AIVASAL+E+Y  T E +YL  A+  L+++ T  Y L N  D Y+SIL + + KWGE E G++FGDYF +EA+ R++  T
Sbjct:  192 VNIDQLMNMELVLWVGKNADKPEYTQMAISHADKTWANNVRENGSTYHVVSYNSQ-GQVVKKRTHQGWKTESTWSRGQAWAVYAYAMYYRYTGLDRMLERSKKSYQYYLEATKKQTNDLVPYADFDAPLDK-DNPRDSSAAAIVASALIELYKITKEEQYLNDAQAMLNSLATPTY-LANNPD-YESILLKGSEKWGEPEVGSIFGDYFFVEALYRWKVWT 408          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig6323.17205.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCI0_9PHAE2.600e-8564.60GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JQV0_9PHAE6.120e-8561.95GH88 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FQV4_ECTSI7.830e-8563.39Unsaturated glucuronyl hydrolase, family GH88 n=1 ... [more]
D7FUJ9_ECTSI2.780e-8354.24Unsaturated glucuronyl hydrolase, family GH88 n=3 ... [more]
D8LHN8_ECTSI1.030e-6367.50Unsaturated glucuronyl hydrolase, family GH88 n=1 ... [more]
A0A6N6ZAI7_9BACT1.070e-5853.92Putative unsaturated glucuronyl hydrolase n=1 Tax=... [more]
R9PSV9_AGAAL9.090e-4844.75Putative unsaturated glucuronyl hydrolase n=4 Tax=... [more]
UPI00200F56051.090e-4746.12glycoside hydrolase family 88 protein n=1 Tax=Agar... [more]
UPI001F1B9B3F1.520e-4544.75glycoside hydrolase family 88 protein n=1 Tax=Vibr... [more]
A0A4Y7ZV10_9GAMM1.740e-4545.70Glucuronyl hydrolase n=2 Tax=Psychromonas sp. RZ22... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig6323contigF-serratus_M_contig6323:13818..17307 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score270.4
Seed ortholog evalue7.3e-70
Seed eggNOG ortholog2880.D7FQV4
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Glycosyl Hydrolase Family 88
EggNOG OGs2CYCX@1,2S3MN@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size2152
Cds size648
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig6323.17205.1prot_F-serratus_M_contig6323.17205.1Fucus serratus malepolypeptideF-serratus_M_contig6323 15284..17269 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931955.3445132-UTR-F-serratus_M_contig6323:13817..152831622931955.3445132-UTR-F-serratus_M_contig6323:13817..15283Fucus serratus maleUTRF-serratus_M_contig6323 13818..15283 -
1690964074.9012063-UTR-F-serratus_M_contig6323:13817..152831690964074.9012063-UTR-F-serratus_M_contig6323:13817..15283Fucus serratus maleUTRF-serratus_M_contig6323 13818..15283 -
1622931955.4690516-UTR-F-serratus_M_contig6323:17269..173071622931955.4690516-UTR-F-serratus_M_contig6323:17269..17307Fucus serratus maleUTRF-serratus_M_contig6323 17270..17307 -
1690964074.998077-UTR-F-serratus_M_contig6323:17269..173071690964074.998077-UTR-F-serratus_M_contig6323:17269..17307Fucus serratus maleUTRF-serratus_M_contig6323 17270..17307 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931955.3604646-CDS-F-serratus_M_contig6323:15283..153101622931955.3604646-CDS-F-serratus_M_contig6323:15283..15310Fucus serratus maleCDSF-serratus_M_contig6323 15284..15310 -
1690964074.9152553-CDS-F-serratus_M_contig6323:15283..153101690964074.9152553-CDS-F-serratus_M_contig6323:15283..15310Fucus serratus maleCDSF-serratus_M_contig6323 15284..15310 -
1622931955.3859928-CDS-F-serratus_M_contig6323:15556..157321622931955.3859928-CDS-F-serratus_M_contig6323:15556..15732Fucus serratus maleCDSF-serratus_M_contig6323 15557..15732 -
1690964074.9340875-CDS-F-serratus_M_contig6323:15556..157321690964074.9340875-CDS-F-serratus_M_contig6323:15556..15732Fucus serratus maleCDSF-serratus_M_contig6323 15557..15732 -
1622931955.398102-CDS-F-serratus_M_contig6323:15997..161371622931955.398102-CDS-F-serratus_M_contig6323:15997..16137Fucus serratus maleCDSF-serratus_M_contig6323 15998..16137 -
1690964074.9494436-CDS-F-serratus_M_contig6323:15997..161371690964074.9494436-CDS-F-serratus_M_contig6323:15997..16137Fucus serratus maleCDSF-serratus_M_contig6323 15998..16137 -
1622931955.412967-CDS-F-serratus_M_contig6323:16399..165291622931955.412967-CDS-F-serratus_M_contig6323:16399..16529Fucus serratus maleCDSF-serratus_M_contig6323 16400..16529 -
1690964074.9588723-CDS-F-serratus_M_contig6323:16399..165291690964074.9588723-CDS-F-serratus_M_contig6323:16399..16529Fucus serratus maleCDSF-serratus_M_contig6323 16400..16529 -
1622931955.4287395-CDS-F-serratus_M_contig6323:16833..169311622931955.4287395-CDS-F-serratus_M_contig6323:16833..16931Fucus serratus maleCDSF-serratus_M_contig6323 16834..16931 -
1690964074.9757094-CDS-F-serratus_M_contig6323:16833..169311690964074.9757094-CDS-F-serratus_M_contig6323:16833..16931Fucus serratus maleCDSF-serratus_M_contig6323 16834..16931 -
1622931955.4481175-CDS-F-serratus_M_contig6323:17192..172691622931955.4481175-CDS-F-serratus_M_contig6323:17192..17269Fucus serratus maleCDSF-serratus_M_contig6323 17193..17269 -
1690964074.9872835-CDS-F-serratus_M_contig6323:17192..172691690964074.9872835-CDS-F-serratus_M_contig6323:17192..17269Fucus serratus maleCDSF-serratus_M_contig6323 17193..17269 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig6323.17205.1

>prot_F-serratus_M_contig6323.17205.1 ID=prot_F-serratus_M_contig6323.17205.1|Name=mRNA_F-serratus_M_contig6323.17205.1|organism=Fucus serratus male|type=polypeptide|length=216bp
MIMNMEIMLWASVNGGNTTYAENVADHADTTWKDIVRDDYSTFHVADYDP
DTGDLVEQGTYQGYADNSTWTRGQAWAVYGNVMIYRYLQEPKFLKRSLAC
LKYFDDNLPSDGVPPADFDAPVSATDNGKDSSATAIVASALLEIYAETGE
SKYLAWAEKYLSAVLTADYYLPNATDGYQSILRRATAKWGETERGAVFGD
YFVLEAMVRYRQLTR*
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mRNA from alignment at F-serratus_M_contig6323:13818..17307-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig6323.17205.1 ID=mRNA_F-serratus_M_contig6323.17205.1|Name=mRNA_F-serratus_M_contig6323.17205.1|organism=Fucus serratus male|type=mRNA|length=3490bp|location=Sequence derived from alignment at F-serratus_M_contig6323:13818..17307- (Fucus serratus male)
CGTCGAGGCCAGAGTGGGAGCGTGCCGTCAACGTCGACATGATCATGAAC ATGGAGATTATGCTGTGGGCCAGTGTCAATGGAGGAAACACGACCTACGC GGAGAACGTCGCTGAGTGAGTATTTATAGGATGATCAGAGACTTTGATTT TCCCTACGCAGGTGTCTCCACCCGGTGACGCATCTATTCGTCTTACAGAC CTGTCATTACTCGACCCAGACTTCCCTCGAGGATCGACGAATGTTCATCG TCGTGCCCTCTAGCACCTCTTACCGTCGAATCTTACTCTCGCGAGCTCGT TTATTCTTTTTTCTACGCTGACCCTCCTCAAATTGAAATGCGACACGTGA TCCTGAATCGACAACGACCCTTCCAGCCACGCCGACACCACGTGGAAGGA CATCGTCCGTGACGACTACAGCACATTCCACGTAGCAGACTATGACCCCG ATACCGGAGATCTTGTGGAACAAGGTACGTAGGGTAAATGTTCACTCGCG CGTACTAAGAAAGCGATTTCAATTACATTGAGCTGCACTCTTTACGAGCT TTTGTTTCCCGTGAGCCTCGTGGTTTGGCGTGAAACCCGAACACAACACC GCTGGTCAACATTGCAAGCGCCGAAACTTCTTTTTGCACCCAGAAACATG AGAACGAAGAATCGTTGAACCGGCATCGAAGCATGACTTTGACGTGGTCG ACTCGCCGGCATAAGAGGTGCGGACGGATTTGTGCCTTTTTACTTAGAAA AATGTTGTGCGTGCATTGCTCCCTATAGGGACGTACCAAGGTTACGCCGA CAACTCTACGTGGACAAGGGGGCAGGCCTGGGCCGTTTACGGAAACGTGA TGATCTACCGCTACCTGCAGGAGCCTAAGTTCCTCAAGCGATCGCTGGCC TGTCTCAAGTGAGATCTGGTGTGAGGTTCAGCAGTACCACAATGTGTTGC AAGCGATTTCGCCTACACATCGCCCGTGTCTACGCTCCGCGGAAAACTCG AACCGGATAAAAGCTTTACGCTGAACGCAACAAGCCTGGGTAAATTTGTT GGCAACACTATTGATATACGCCGTCTGCTCCTCCTGTTAATACTTCGTAC TGAGTCAAGCTTTTTACTGAGAACGCCCCGTGTCGTTCGGCCCGCTCCCC CCCGCCGGGATTGACTGCAGGTACTTCGACGACAATCTGCCGAGCGATGG AGTCCCTCCCGCGGACTTCGATGCCCCGGTTTCTGCCACAGACAACGGGA AGGACAGCTCGGCCACGGCCATCGTCGCTTCGGCCCTTTTAGAGATATAT GCCGAAACCGGTGCGTCGTTACACTTGGAACTTCGAGTCACGCTGCACCA CGAACCGCCAAACGGTGTTTTGTCATGTGTGTAGTCTGCCACATAGCATG GCACCTTGCCTCCTTACTGACTGAAAATATATTATGGAAAATCATTAAAT GTGGTTGGAGTTTACTCGTTTTAGTTTCCTCACTGATGACATCTCGTTTC ACCGGTTAATAATATAAATTGTTGACGGTTACTCTGCCGTTTGCCGCCTT CTCCGACAAATCTACGGGCGGTCAGGGGAGTCGAAGTACCTGGCCTGGGC GGAAAAATACCTGTCTGCGGTTCTTACCGCTGATTACTACTTGCCTAACG CCACCGATGGATACCAGTCCATCTTGCGCCGAGCGACGGCAAAGTGGGGC GAGACGGAGAGAGGCGCCGTTTTCGGTGACTACTTTGTGCTCGAGGCCAT GGTAAGTGGAGCTGAGTTTAGTACTTTTTCCTCGAGGGTTGAAAAAAGAG CCTCACTTGTAGTTTTCACATTTAGTGCAGGAGTTCCCCCGCTTGAGTGA TGCGGGGACTTGAACTCCAGAGATAGGGAGAAAGCTAAAACGTAAAACTC TCTCATGAGCGTCCATGCTCTCCCACGCATGCTTTCTCTGAGCCCGTGCC CCCTCGACGCCCTATCTATGCAACACGATTATGAAACTCTATCGCAGGTG CGATACAGGCAGTTGACGCGTTAAACGCTCTGTACTGCGCAAACAGTGGG TACCTTTTGCACGAGGACCTCTCGTCGGAAAGTTACGGACTCGGTGCCGT CAACTGGGTTCCTTTACATCTTCGATGGGAGAGCTCGTAATAATGCCGTC ACAAGGAATCCCTGAAGGGACATGTGTCCAAGGGTATCGACGGATCTGTT TGGATTGCTACAGGGCGTAGCCCATTCCTCGGGACAAAGTTTTGACCACA CGTTTGCTTGAGTAGTATGTTCCACATCTCCTCCTTGAAGCATCAGACCA ATATATTAACACTGTATCCAAGTGTATGTAGAGCTAGCCTCATAGAGCTA TGCTATATTCTGTGCTTGCTTATGATATATTTTGGGGAGAACGCCACTAC TACCAAGTTTGCCGAGCTAGCGGTAGCTAAATCCAGGGTCGCGCCCTGCT TGTAGTATTCGACAGAAGGGTATGCCAGTGACTGAATTGTCAATATTGTT CTCCTTGGATCCAGTTGGAATAGTTGGCGGGGCCCACTTCCTCTTGAAGG AATGCAGGTTCAAATCCGGTAAAGGAATAACCTAGATTGTAAGCCACGAT ATTAAAATGCAACAAGTCGCTGTCTGCGTGGTTCACCGTGCCTTGTTTTC GACTCCTCCGAGTCGACCAAAAAGGTATAGGTTGTTTAAGCACTCTTCTT TCGTTTAATATCGAAAACATACATTTCCTAAGCCACACAGAATATAAGAT GTAGGTATGTCAAATAGCCGGAAGCACCTCAATTGCAGGATTGGTTTCTG GGGGATTTCACATGAAGGAGGGAAGGTAGGCTCCCACTTACTCACTCAGG TACCACCGTTCAGGTCTAGCAGTTCGATTTCGTTGTAGAGAAACACTTCG CAGTTTGACGATCGTTAGTGCTTGCGCAGAATCAACGAGCTAGGGGATGA AACACGGCACGGCTGCCTTTTGTATGTGGTCGCCTTGGGTATGCGGTGTT GGAATGAGGATGAAGAAGTATGCTGGGGGAGCATCGTAGGTACCGTATAT TTCGTTGACGTTATGACGTTGTTCAGGATGAGTCCGTAAGAAAAAGGGAG CGTTTAAATGGGGACAAGTGGTTGCTTAACATCTACTGTCTTGTGCCTCT TGCCTTTCCGTTTGCATTATGACATGAGGCGGTTGGTGCCTCCAGCGCCT AGTCAGAGTATGTACGTGTTGTAAACAACCGCGTGGTGCATGTTTGAGTC GTACCGGGTTGTTTGTCGTCAAAGGTTCGAGACCTGTTGTTTTTGGCGTT CGCGCTATGTTTGACTCTTGTACCTCCATCGAGGTCCGTGTATGTTATAT ATCTTAGTCTTGGGTAAGCTGCCTGATGTCGAAAACGAGGCCAGAATCTC GGCGCAGCCTATCTGGCCCCGCCGCTCAACGTCGCACGGAACAGGGCATT CAAGCTAATGAATCACGCCACAAACAATAAAAAAGGAGTA
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Coding sequence (CDS) from alignment at F-serratus_M_contig6323:13818..17307-

>mRNA_F-serratus_M_contig6323.17205.1 ID=mRNA_F-serratus_M_contig6323.17205.1|Name=mRNA_F-serratus_M_contig6323.17205.1|organism=Fucus serratus male|type=CDS|length=1296bp|location=Sequence derived from alignment at F-serratus_M_contig6323:13818..17307- (Fucus serratus male)
ATGATCATGAACATGGAGATTATGCTGTGGGCCAGTGTCAATGGAGGAAA
CACGACCTACGCGGAGAACGTCGCTGAATGATCATGAACATGGAGATTAT
GCTGTGGGCCAGTGTCAATGGAGGAAACACGACCTACGCGGAGAACGTCG
CTGACCACGCCGACACCACGTGGAAGGACATCGTCCGTGACGACTACAGC
ACATTCCACGTAGCAGACTATGACCCCGATACCGGAGATCTTGTGGAACA
AGCCACGCCGACACCACGTGGAAGGACATCGTCCGTGACGACTACAGCAC
ATTCCACGTAGCAGACTATGACCCCGATACCGGAGATCTTGTGGAACAAG
GGACGTACCAAGGTTACGCCGACAACTCTACGTGGACAAGGGGGCAGGCC
TGGGCCGTTTACGGAAACGTGATGATCTACCGCTACCTGCAGGAGCCTAA
GTTCCTCAAGCGATCGCTGGCCTGTCTCAAGGACGTACCAAGGTTACGCC
GACAACTCTACGTGGACAAGGGGGCAGGCCTGGGCCGTTTACGGAAACGT
GATGATCTACCGCTACCTGCAGGAGCCTAAGTTCCTCAAGCGATCGCTGG
CCTGTCTCAAGTACTTCGACGACAATCTGCCGAGCGATGGAGTCCCTCCC
GCGGACTTCGATGCCCCGGTTTCTGCCACAGACAACGGGAAGGACAGCTC
GGCCACGGCCATCGTCGCTTCGGCCCTTTTAGAGATATATGCCGAAACCG
GTACTTCGACGACAATCTGCCGAGCGATGGAGTCCCTCCCGCGGACTTCG
ATGCCCCGGTTTCTGCCACAGACAACGGGAAGGACAGCTCGGCCACGGCC
ATCGTCGCTTCGGCCCTTTTAGAGATATATGCCGAAACCGGGGAGTCGAA
GTACCTGGCCTGGGCGGAAAAATACCTGTCTGCGGTTCTTACCGCTGATT
ACTACTTGCCTAACGCCACCGATGGATACCAGTCCATCTTGCGCCGAGCG
ACGGCAAAGTGGGGCGAGACGGAGAGAGGCGCCGTTTTCGGTGACTACTT
TGTGCTCGAGGCCATGGGGAGTCGAAGTACCTGGCCTGGGCGGAAAAATA
CCTGTCTGCGGTTCTTACCGCTGATTACTACTTGCCTAACGCCACCGATG
GATACCAGTCCATCTTGCGCCGAGCGACGGCAAAGTGGGGCGAGACGGAG
AGAGGCGCCGTTTTCGGTGACTACTTTGTGCTCGAGGCCATGGTGCGATA
CAGGCAGTTGACGCGTTAAGTGCGATACAGGCAGTTGACGCGTTAA
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