mRNA_F-serratus_M_contig63.17139.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig63.17139.1 vs. uniprot
Match: A0A0H5B5W8_9PHAE (Photosystem I P700 apoprotein A2 (Fragment) n=1 Tax=Syringoderma abyssicola TaxID=217214 RepID=A0A0H5B5W8_9PHAE) HSP 1 Score: 274 bits (700), Expect = 2.310e-89 Identity = 135/166 (81.33%), Postives = 140/166 (84.34%), Query Frame = 1
Query: 4 RIWFGIATAHDFETHYNGMTEEHLY*KKNASHFGHLAIIFLWTSGNLFHVAWQGNFEQ*VFKSIKSKTNCSFNIWDPHFDQLAMKAFTKGGAFYPVNMSYSGVYHWWYTIGMRNNNDLYIGSILLIALSSLLLFAGLLHLQPKVLPS*SWFKTNESRLNRHLTGLF 501
RIWFGIATAHDFETH +GMTEE+LY K ASHFGHLAIIFLWTSGNLFHVAWQGNFEQ +K K + IWDPHF QLAMKAFTKGGAFYPVN+SYSGVYHWWYTIGMR NNDLY GSI LI LSSLLLFAG LHLQPK PS SWFK NESRLN HLTGLF
Sbjct: 1 RIWFGIATAHDFETH-DGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEQWTLNPLKVKP-IAHTIWDPHFGQLAMKAFTKGGAFYPVNISYSGVYHWWYTIGMRTNNDLYTGSIFLIGLSSLLLFAGWLHLQPKFRPSLSWFKNNESRLNHHLTGLF 164
BLAST of mRNA_F-serratus_M_contig63.17139.1 vs. uniprot
Match: A0A1Z4F594_9PHAE (Photosystem I (Fragment) n=38 Tax=Phaeophyceae TaxID=2870 RepID=A0A1Z4F594_9PHAE) HSP 1 Score: 279 bits (713), Expect = 7.390e-87 Identity = 137/167 (82.04%), Postives = 144/167 (86.23%), Query Frame = 1
Query: 1 RRIWFGIATAHDFETHYNGMTEEHLY*KKNASHFGHLAIIFLWTSGNLFHVAWQGNFEQ*VFKSIKSKTNCSFNIWDPHFDQLAMKAFTKGGAFYPVNMSYSGVYHWWYTIGMRNNNDLYIGSILLIALSSLLLFAGLLHLQPKVLPS*SWFKTNESRLNRHLTGLF 501
RRIWFGIATAHDFETH +GMTEE+LY K ASHFGHLAIIFLWTSGNLFHVAWQGNFEQ +K K + IWDPHF +LAMKAFTKGGAFYPVN+SYSGVYHWWYTIGMR NNDLY+GSI LIALSSLLLFAG LHLQPK PS SWFKTNESRLN HLTGLF
Sbjct: 5 RRIWFGIATAHDFETH-DGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEQWSLNPLKVKP-IAHTIWDPHFGELAMKAFTKGGAFYPVNISYSGVYHWWYTIGMRTNNDLYVGSIFLIALSSLLLFAGWLHLQPKFRPSLSWFKTNESRLNHHLTGLF 169
BLAST of mRNA_F-serratus_M_contig63.17139.1 vs. uniprot
Match: A0A0H5B5V3_9PHAE (Photosystem I P700 apoprotein A2 (Fragment) n=2 Tax=Phaeophyceae TaxID=2870 RepID=A0A0H5B5V3_9PHAE) HSP 1 Score: 269 bits (688), Expect = 4.160e-86 Identity = 130/167 (77.84%), Postives = 142/167 (85.03%), Query Frame = 1
Query: 1 RRIWFGIATAHDFETHYNGMTEEHLY*KKNASHFGHLAIIFLWTSGNLFHVAWQGNFEQ*VFKSIKSKTNCSFNIWDPHFDQLAMKAFTKGGAFYPVNMSYSGVYHWWYTIGMRNNNDLYIGSILLIALSSLLLFAGLLHLQPKVLPS*SWFKTNESRLNRHLTGLF 501
RRIW+GIATAHDFETH +GMTEE+LY K ASHFGH+AIIFLWTSGNLFHVAWQGNFEQ + +K K + IWDPHF LAMKAFTKGGA +PVN+SY+G+YHWWYTIGMR NNDLYIGSI LIALSSLLLFAG LHLQPK P+ SWFK NESRLN HLTGLF
Sbjct: 1 RRIWYGIATAHDFETH-DGMTEENLYQKIFASHFGHIAIIFLWTSGNLFHVAWQGNFEQWILNPLKVKP-IAHTIWDPHFGSLAMKAFTKGGAIFPVNISYAGLYHWWYTIGMRTNNDLYIGSIFLIALSSLLLFAGWLHLQPKFRPNLSWFKNNESRLNHHLTGLF 165
BLAST of mRNA_F-serratus_M_contig63.17139.1 vs. uniprot
Match: A0A0R6MFW0_UNDPI (Photosystem I P700 chlorophyll a apoprotein A2 n=71 Tax=Stramenopiles TaxID=33634 RepID=A0A0R6MFW0_UNDPI) HSP 1 Score: 279 bits (713), Expect = 3.260e-85 Identity = 137/167 (82.04%), Postives = 144/167 (86.23%), Query Frame = 1
Query: 1 RRIWFGIATAHDFETHYNGMTEEHLY*KKNASHFGHLAIIFLWTSGNLFHVAWQGNFEQ*VFKSIKSKTNCSFNIWDPHFDQLAMKAFTKGGAFYPVNMSYSGVYHWWYTIGMRNNNDLYIGSILLIALSSLLLFAGLLHLQPKVLPS*SWFKTNESRLNRHLTGLF 501
RRIWFGIATAHDFETH +GMTEE+LY K ASHFGHLAIIFLWTSGNLFHVAWQGNFEQ +K K + IWDPHF +LAMKAFTKGGAFYPVN+SYSGVYHWWYTIGMR NNDLY+GSI LIALSSLLLFAG LHLQPK PS SWFKTNESRLN HLTGLF
Sbjct: 19 RRIWFGIATAHDFETH-DGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEQWSLNPLKVKP-IAHTIWDPHFGELAMKAFTKGGAFYPVNISYSGVYHWWYTIGMRTNNDLYVGSIFLIALSSLLLFAGWLHLQPKFRPSLSWFKTNESRLNHHLTGLF 183
BLAST of mRNA_F-serratus_M_contig63.17139.1 vs. uniprot
Match: A0A0S3NV06_9PHAE (Photosystem I P700 apoprotein A2 (Fragment) n=1 Tax=Notheia anomala TaxID=97153 RepID=A0A0S3NV06_9PHAE) HSP 1 Score: 259 bits (662), Expect = 3.420e-82 Identity = 128/166 (77.11%), Postives = 137/166 (82.53%), Query Frame = 1
Query: 4 RIWFGIATAHDFETHYNGMTEEHLY*KKNASHFGHLAIIFLWTSGNLFHVAWQGNFEQ*VFKSIKSKTNCSFNIWDPHFDQLAMKAFTKGGAFYPVNMSYSGVYHWWYTIGMRNNNDLYIGSILLIALSSLLLFAGLLHLQPKVLPS*SWFKTNESRLNRHLTGLF 501
RIWFGIATAHDFETH +GMTEE+LY K ASHFGHLAIIFLWTSGNLFHVAWQGNFE+ +K K + IWDPHF +LAMKAF+KGGAFYPVN+SYSGVYHWWYTIGMR NDLYI SI LI LSS+ LFAG LHLQPK PS S FK NESRLN HLTGLF
Sbjct: 1 RIWFGIATAHDFETH-DGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEEWALNPLKVKP-IAHTIWDPHFGELAMKAFSKGGAFYPVNISYSGVYHWWYTIGMRTKNDLYISSIFLIILSSVFLFAGWLHLQPKFRPSISGFKNNESRLNHHLTGLF 164
BLAST of mRNA_F-serratus_M_contig63.17139.1 vs. uniprot
Match: A0A7T7IGM3_9STRA (Photosystem I P700 chlorophyll a apoprotein A2 n=3 Tax=Stichogloea TaxID=82160 RepID=A0A7T7IGM3_9STRA) HSP 1 Score: 262 bits (670), Expect = 6.760e-79 Identity = 129/167 (77.25%), Postives = 138/167 (82.63%), Query Frame = 1
Query: 1 RRIWFGIATAHDFETHYNGMTEEHLY*KKNASHFGHLAIIFLWTSGNLFHVAWQGNFEQ*VFKSIKSKTNCSFNIWDPHFDQLAMKAFTKGGAFYPVNMSYSGVYHWWYTIGMRNNNDLYIGSILLIALSSLLLFAGLLHLQPKVLPS*SWFKTNESRLNRHLTGLF 501
RRIWFGIATAHDFETH +GMTEE+LY K ASHFGHLAIIFLWTSGNLFHVAWQGNFEQ V +K K + IWDPHF + A+KAFTK GAFYPVN+SYSGVY WWYTIGMR NNDLY+GSI LI SSL LFAG LHLQPK PS SWFK NESRLN HL+GLF
Sbjct: 19 RRIWFGIATAHDFETH-DGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEQWVLNPLKVKP-IAHTIWDPHFGEPAIKAFTKAGAFYPVNISYSGVYQWWYTIGMRTNNDLYLGSIFLILASSLFLFAGWLHLQPKFRPSLSWFKNNESRLNHHLSGLF 183
BLAST of mRNA_F-serratus_M_contig63.17139.1 vs. uniprot
Match: B7T242_VAULI (Photosystem I P700 chlorophyll a apoprotein A2 n=2 Tax=Ochrophyta TaxID=2696291 RepID=B7T242_VAULI) HSP 1 Score: 261 bits (667), Expect = 1.860e-78 Identity = 127/167 (76.05%), Postives = 139/167 (83.23%), Query Frame = 1
Query: 1 RRIWFGIATAHDFETHYNGMTEEHLY*KKNASHFGHLAIIFLWTSGNLFHVAWQGNFEQ*VFKSIKSKTNCSFNIWDPHFDQLAMKAFTKGGAFYPVNMSYSGVYHWWYTIGMRNNNDLYIGSILLIALSSLLLFAGLLHLQPKVLPS*SWFKTNESRLNRHLTGLF 501
RRIW+GIATAHDFETH +GMTEE LY K ASHFGHLAIIFLWTSGNLFHVAWQGNFE + +K K + IWDPHF + A+KAFTKGGAFYPVN++YSGVYHWWYTIGMR NNDLY+GSI LI LS+L LFAG LHLQPK PS SWFK NESRLN HL+GLF
Sbjct: 19 RRIWYGIATAHDFETH-DGMTEEKLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEDWILNPLKVKP-IAHTIWDPHFGEPALKAFTKGGAFYPVNIAYSGVYHWWYTIGMRTNNDLYLGSIGLIILSALFLFAGGLHLQPKFRPSLSWFKNNESRLNHHLSGLF 183
BLAST of mRNA_F-serratus_M_contig63.17139.1 vs. uniprot
Match: B2XT53_HETAK (Photosystem I P700 chlorophyll a apoprotein A2 n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XT53_HETAK) HSP 1 Score: 259 bits (662), Expect = 1.000e-77 Identity = 126/167 (75.45%), Postives = 139/167 (83.23%), Query Frame = 1
Query: 1 RRIWFGIATAHDFETHYNGMTEEHLY*KKNASHFGHLAIIFLWTSGNLFHVAWQGNFEQ*VFKSIKSKTNCSFNIWDPHFDQLAMKAFTKGGAFYPVNMSYSGVYHWWYTIGMRNNNDLYIGSILLIALSSLLLFAGLLHLQPKVLPS*SWFKTNESRLNRHLTGLF 501
RRIW+GIATAHDFE+H +GMTEE LY K ASHFGHLAIIFLWT+GNLFHVAWQGNFEQ V +K K + IWDPHF Q A+KAFTKGGAFYPV++SYSGVYHWWYTIGMR NNDLY GS+ LI S+LLLFAG LHLQPK PS +WFK NESRLN HL+GLF
Sbjct: 19 RRIWYGIATAHDFESH-DGMTEEKLYQKIFASHFGHLAIIFLWTAGNLFHVAWQGNFEQWVLNPLKVKP-IAHQIWDPHFGQSAIKAFTKGGAFYPVDISYSGVYHWWYTIGMRTNNDLYTGSLGLIGFSALLLFAGWLHLQPKFSPSLAWFKNNESRLNHHLSGLF 183
BLAST of mRNA_F-serratus_M_contig63.17139.1 vs. uniprot
Match: M5DES3_CHOCR (Photosystem I P700 chlorophyll a apoprotein A2 n=3 Tax=Gigartinales TaxID=28017 RepID=M5DES3_CHOCR) HSP 1 Score: 256 bits (655), Expect = 1.060e-76 Identity = 122/167 (73.05%), Postives = 140/167 (83.83%), Query Frame = 1
Query: 1 RRIWFGIATAHDFETHYNGMTEEHLY*KKNASHFGHLAIIFLWTSGNLFHVAWQGNFEQ*VFKSIKSKTNCSFNIWDPHFDQLAMKAFTKGGAFYPVNMSYSGVYHWWYTIGMRNNNDLYIGSILLIALSSLLLFAGLLHLQPKVLPS*SWFKTNESRLNRHLTGLF 501
RRIW+GIATAHDFE+H +GMTEE+LY K ASHFGH+AIIFLWTSGNLFH+AWQGNFEQ V +K+K + IWDPHF Q A+KAFTKGGA YPVN+ +SGVYHWWYTIGMR NNDLY G++LL+ LS+L+LFAG LHLQPK P SWFK NESRLN HL+GLF
Sbjct: 19 RRIWYGIATAHDFESH-DGMTEENLYQKIFASHFGHIAIIFLWTSGNLFHIAWQGNFEQWVLNPLKTKP-IAHAIWDPHFGQPAIKAFTKGGASYPVNLCFSGVYHWWYTIGMRTNNDLYSGALLLLILSALMLFAGWLHLQPKFKPGLSWFKNNESRLNHHLSGLF 183
BLAST of mRNA_F-serratus_M_contig63.17139.1 vs. uniprot
Match: A0A1C9CCP3_9RHOD (Photosystem I P700 chlorophyll a apoprotein A2 n=10 Tax=Rhodophyta TaxID=2763 RepID=A0A1C9CCP3_9RHOD) HSP 1 Score: 255 bits (652), Expect = 2.920e-76 Identity = 123/167 (73.65%), Postives = 140/167 (83.83%), Query Frame = 1
Query: 1 RRIWFGIATAHDFETHYNGMTEEHLY*KKNASHFGHLAIIFLWTSGNLFHVAWQGNFEQ*VFKSIKSKTNCSFNIWDPHFDQLAMKAFTKGGAFYPVNMSYSGVYHWWYTIGMRNNNDLYIGSILLIALSSLLLFAGLLHLQPKVLPS*SWFKTNESRLNRHLTGLF 501
RRIWFGIATAHDFE+H +GMTEE+LY K ASHFGHLAIIFLWTSGNLFHVAWQGNFEQ V +K+K + IWDPHF Q A+KAFTKGG YPV++S+SGVYHWWYTIGMR N+DLY GS+ L+ LS++LLFAG LHLQPK P+ SWFK NESRLN HL+GLF
Sbjct: 19 RRIWFGIATAHDFESH-DGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFEQWVLNPLKTKP-IAHAIWDPHFGQPALKAFTKGGVTYPVDISFSGVYHWWYTIGMRTNSDLYTGSLFLLILSAVLLFAGWLHLQPKFRPALSWFKNNESRLNHHLSGLF 183 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig63.17139.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig63.17139.1 >prot_F-serratus_M_contig63.17139.1 ID=prot_F-serratus_M_contig63.17139.1|Name=mRNA_F-serratus_M_contig63.17139.1|organism=Fucus serratus male|type=polypeptide|length=65bp MKAFTKGGAFYPVNMSYSGVYHWWYTIGMRNNNDLYIGSILLIALSSLLLback to top mRNA from alignment at F-serratus_M_contig63:136992..138216- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig63.17139.1 ID=mRNA_F-serratus_M_contig63.17139.1|Name=mRNA_F-serratus_M_contig63.17139.1|organism=Fucus serratus male|type=mRNA|length=1225bp|location=Sequence derived from alignment at F-serratus_M_contig63:136992..138216- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig63:136992..138216- >mRNA_F-serratus_M_contig63.17139.1 ID=mRNA_F-serratus_M_contig63.17139.1|Name=mRNA_F-serratus_M_contig63.17139.1|organism=Fucus serratus male|type=CDS|length=390bp|location=Sequence derived from alignment at F-serratus_M_contig63:136992..138216- (Fucus serratus male)back to top |