prot_F-serratus_M_contig63.17139.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig63.17139.1
Unique Nameprot_F-serratus_M_contig63.17139.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length65
Homology
BLAST of mRNA_F-serratus_M_contig63.17139.1 vs. uniprot
Match: A0A0H5B5W8_9PHAE (Photosystem I P700 apoprotein A2 (Fragment) n=1 Tax=Syringoderma abyssicola TaxID=217214 RepID=A0A0H5B5W8_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 6.070e-31
Identity = 56/64 (87.50%), Postives = 57/64 (89.06%), Query Frame = 0
Query:    1 MKAFTKGGAFYPVNMSYSGVYHWWYTIGMRNNNDLYIGSILLIALSSLLLFAGLLHLQPKVLPS 64
            MKAFTKGGAFYPVN+SYSGVYHWWYTIGMR NNDLY GSI LI LSSLLLFAG LHLQPK  PS
Sbjct:   82 MKAFTKGGAFYPVNISYSGVYHWWYTIGMRTNNDLYTGSIFLIGLSSLLLFAGWLHLQPKFRPS 145          
BLAST of mRNA_F-serratus_M_contig63.17139.1 vs. uniprot
Match: A0A1Z4F594_9PHAE (Photosystem I (Fragment) n=38 Tax=Phaeophyceae TaxID=2870 RepID=A0A1Z4F594_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 5.520e-30
Identity = 57/64 (89.06%), Postives = 59/64 (92.19%), Query Frame = 0
Query:    1 MKAFTKGGAFYPVNMSYSGVYHWWYTIGMRNNNDLYIGSILLIALSSLLLFAGLLHLQPKVLPS 64
            MKAFTKGGAFYPVN+SYSGVYHWWYTIGMR NNDLY+GSI LIALSSLLLFAG LHLQPK  PS
Sbjct:   87 MKAFTKGGAFYPVNISYSGVYHWWYTIGMRTNNDLYVGSIFLIALSSLLLFAGWLHLQPKFRPS 150          
BLAST of mRNA_F-serratus_M_contig63.17139.1 vs. uniprot
Match: A0A0R6MFW0_UNDPI (Photosystem I P700 chlorophyll a apoprotein A2 n=71 Tax=Stramenopiles TaxID=33634 RepID=A0A0R6MFW0_UNDPI)

HSP 1 Score: 119 bits (298), Expect = 7.960e-30
Identity = 57/64 (89.06%), Postives = 59/64 (92.19%), Query Frame = 0
Query:    1 MKAFTKGGAFYPVNMSYSGVYHWWYTIGMRNNNDLYIGSILLIALSSLLLFAGLLHLQPKVLPS 64
            MKAFTKGGAFYPVN+SYSGVYHWWYTIGMR NNDLY+GSI LIALSSLLLFAG LHLQPK  PS
Sbjct:  101 MKAFTKGGAFYPVNISYSGVYHWWYTIGMRTNNDLYVGSIFLIALSSLLLFAGWLHLQPKFRPS 164          
BLAST of mRNA_F-serratus_M_contig63.17139.1 vs. uniprot
Match: A0A0H5BB96_9PHAE (Photosystem I P700 apoprotein A2 (Fragment) n=2 Tax=Phaeophyceae TaxID=2870 RepID=A0A0H5BB96_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 2.020e-29
Identity = 56/64 (87.50%), Postives = 57/64 (89.06%), Query Frame = 0
Query:    1 MKAFTKGGAFYPVNMSYSGVYHWWYTIGMRNNNDLYIGSILLIALSSLLLFAGLLHLQPKVLPS 64
            MKAFTKGGAFYPVN+SYSGVYHWWYTIGMR NNDLY GSI LI LSSLLLFAG LHLQPK  PS
Sbjct:   70 MKAFTKGGAFYPVNISYSGVYHWWYTIGMRTNNDLYTGSIFLIVLSSLLLFAGWLHLQPKFRPS 133          
BLAST of mRNA_F-serratus_M_contig63.17139.1 vs. uniprot
Match: A0A0H5B5V3_9PHAE (Photosystem I P700 apoprotein A2 (Fragment) n=2 Tax=Phaeophyceae TaxID=2870 RepID=A0A0H5B5V3_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 1.590e-28
Identity = 53/64 (82.81%), Postives = 58/64 (90.62%), Query Frame = 0
Query:    1 MKAFTKGGAFYPVNMSYSGVYHWWYTIGMRNNNDLYIGSILLIALSSLLLFAGLLHLQPKVLPS 64
            MKAFTKGGA +PVN+SY+G+YHWWYTIGMR NNDLYIGSI LIALSSLLLFAG LHLQPK  P+
Sbjct:   83 MKAFTKGGAIFPVNISYAGLYHWWYTIGMRTNNDLYIGSIFLIALSSLLLFAGWLHLQPKFRPN 146          
BLAST of mRNA_F-serratus_M_contig63.17139.1 vs. uniprot
Match: A0A0S3NV06_9PHAE (Photosystem I P700 apoprotein A2 (Fragment) n=1 Tax=Notheia anomala TaxID=97153 RepID=A0A0S3NV06_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 3.290e-27
Identity = 52/64 (81.25%), Postives = 55/64 (85.94%), Query Frame = 0
Query:    1 MKAFTKGGAFYPVNMSYSGVYHWWYTIGMRNNNDLYIGSILLIALSSLLLFAGLLHLQPKVLPS 64
            MKAF+KGGAFYPVN+SYSGVYHWWYTIGMR  NDLYI SI LI LSS+ LFAG LHLQPK  PS
Sbjct:   82 MKAFSKGGAFYPVNISYSGVYHWWYTIGMRTKNDLYISSIFLIILSSVFLFAGWLHLQPKFRPS 145          
BLAST of mRNA_F-serratus_M_contig63.17139.1 vs. uniprot
Match: B7T242_VAULI (Photosystem I P700 chlorophyll a apoprotein A2 n=2 Tax=Ochrophyta TaxID=2696291 RepID=B7T242_VAULI)

HSP 1 Score: 109 bits (273), Expect = 1.930e-26
Identity = 52/64 (81.25%), Postives = 57/64 (89.06%), Query Frame = 0
Query:    1 MKAFTKGGAFYPVNMSYSGVYHWWYTIGMRNNNDLYIGSILLIALSSLLLFAGLLHLQPKVLPS 64
            +KAFTKGGAFYPVN++YSGVYHWWYTIGMR NNDLY+GSI LI LS+L LFAG LHLQPK  PS
Sbjct:  101 LKAFTKGGAFYPVNIAYSGVYHWWYTIGMRTNNDLYLGSIGLIILSALFLFAGGLHLQPKFRPS 164          
BLAST of mRNA_F-serratus_M_contig63.17139.1 vs. uniprot
Match: B2XT53_HETAK (Photosystem I P700 chlorophyll a apoprotein A2 n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=B2XT53_HETAK)

HSP 1 Score: 107 bits (268), Expect = 9.180e-26
Identity = 51/64 (79.69%), Postives = 56/64 (87.50%), Query Frame = 0
Query:    1 MKAFTKGGAFYPVNMSYSGVYHWWYTIGMRNNNDLYIGSILLIALSSLLLFAGLLHLQPKVLPS 64
            +KAFTKGGAFYPV++SYSGVYHWWYTIGMR NNDLY GS+ LI  S+LLLFAG LHLQPK  PS
Sbjct:  101 IKAFTKGGAFYPVDISYSGVYHWWYTIGMRTNNDLYTGSLGLIGFSALLLFAGWLHLQPKFSPS 164          
BLAST of mRNA_F-serratus_M_contig63.17139.1 vs. uniprot
Match: A0A7T7IGM3_9STRA (Photosystem I P700 chlorophyll a apoprotein A2 n=3 Tax=Stichogloea TaxID=82160 RepID=A0A7T7IGM3_9STRA)

HSP 1 Score: 106 bits (265), Expect = 2.340e-25
Identity = 51/64 (79.69%), Postives = 54/64 (84.38%), Query Frame = 0
Query:    1 MKAFTKGGAFYPVNMSYSGVYHWWYTIGMRNNNDLYIGSILLIALSSLLLFAGLLHLQPKVLPS 64
            +KAFTK GAFYPVN+SYSGVY WWYTIGMR NNDLY+GSI LI  SSL LFAG LHLQPK  PS
Sbjct:  101 IKAFTKAGAFYPVNISYSGVYQWWYTIGMRTNNDLYLGSIFLILASSLFLFAGWLHLQPKFRPS 164          
BLAST of mRNA_F-serratus_M_contig63.17139.1 vs. uniprot
Match: A0A0C2MB11_9CYAN (Photosystem I P700 chlorophyll a apoprotein A2 (Fragment) n=2 Tax=Nostocales TaxID=1161 RepID=A0A0C2MB11_9CYAN)

HSP 1 Score: 103 bits (256), Expect = 1.690e-24
Identity = 46/64 (71.88%), Postives = 56/64 (87.50%), Query Frame = 0
Query:    1 MKAFTKGGAFYPVNMSYSGVYHWWYTIGMRNNNDLYIGSILLIALSSLLLFAGLLHLQPKVLPS 64
            ++AFT+GGA YPVN++YSG+YHWWYTIGMR NN+LYIGS+ L+ LSS+ LFAG LHLQPK  PS
Sbjct:  101 IEAFTQGGANYPVNITYSGIYHWWYTIGMRTNNELYIGSVFLLVLSSVFLFAGWLHLQPKYRPS 164          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig63.17139.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0H5B5W8_9PHAE6.070e-3187.50Photosystem I P700 apoprotein A2 (Fragment) n=1 Ta... [more]
A0A1Z4F594_9PHAE5.520e-3089.06Photosystem I (Fragment) n=38 Tax=Phaeophyceae Tax... [more]
A0A0R6MFW0_UNDPI7.960e-3089.06Photosystem I P700 chlorophyll a apoprotein A2 n=7... [more]
A0A0H5BB96_9PHAE2.020e-2987.50Photosystem I P700 apoprotein A2 (Fragment) n=2 Ta... [more]
A0A0H5B5V3_9PHAE1.590e-2882.81Photosystem I P700 apoprotein A2 (Fragment) n=2 Ta... [more]
A0A0S3NV06_9PHAE3.290e-2781.25Photosystem I P700 apoprotein A2 (Fragment) n=1 Ta... [more]
B7T242_VAULI1.930e-2681.25Photosystem I P700 chlorophyll a apoprotein A2 n=2... [more]
B2XT53_HETAK9.180e-2679.69Photosystem I P700 chlorophyll a apoprotein A2 n=3... [more]
A0A7T7IGM3_9STRA2.340e-2579.69Photosystem I P700 chlorophyll a apoprotein A2 n=3... [more]
A0A0C2MB11_9CYAN1.690e-2471.88Photosystem I P700 chlorophyll a apoprotein A2 (Fr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001280Photosystem I PsaA/PsaBPFAMPF00223PsaA_PsaBcoord: 2..63
e-value: 2.2E-15
score: 56.0
IPR036408Photosystem I PsaA/PsaB superfamilyGENE3D1.20.1130.10coord: 1..64
e-value: 1.3E-14
score: 55.2
IPR036408Photosystem I PsaA/PsaB superfamilySUPERFAMILY81558Photosystem I subunits PsaA/PsaBcoord: 2..64
NoneNo IPR availablePANTHERPTHR30128:SF4coord: 2..64
NoneNo IPR availablePANTHERPTHR30128OUTER MEMBRANE PROTEIN, OMPA-RELATEDcoord: 2..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 58..64
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..34
NoneNo IPR availableTMHMMTMhelixcoord: 35..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig63contigF-serratus_M_contig63:137770..137964 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig63.17139.1mRNA_F-serratus_M_contig63.17139.1Fucus serratus malemRNAF-serratus_M_contig63 136992..138216 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig63.17139.1 ID=prot_F-serratus_M_contig63.17139.1|Name=mRNA_F-serratus_M_contig63.17139.1|organism=Fucus serratus male|type=polypeptide|length=65bp
MKAFTKGGAFYPVNMSYSGVYHWWYTIGMRNNNDLYIGSILLIALSSLLL
FAGLLHLQPKVLPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001280PSI_PsaA/B
IPR036408PSI_PsaA/B_sf