prot_F-serratus_M_contig62.17028.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig62.17028.1
Unique Nameprot_F-serratus_M_contig62.17028.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length168
Homology
BLAST of mRNA_F-serratus_M_contig62.17028.1 vs. uniprot
Match: D7FX58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX58_ECTSI)

HSP 1 Score: 310 bits (794), Expect = 2.450e-106
Identity = 152/166 (91.57%), Postives = 159/166 (95.78%), Query Frame = 0
Query:    1 MLIPPSDFGPKLKDTVRRKLIQEVEGTSVGSLGFVITVTEVTDDHIQLGTIEFDTGFVNVRAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIARGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTVGAELKAVGSIKDDFLGLISGP 166
            ML+PPSDFGPKLKDT+RRKLI+EVEGTSVGSLGFVITVT V+DD IQ+GTIEFDTGF NV  VYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIA GYD VGDMWVSSEDSDTEIK+GCGVRLRIIGVTVGAELKAVGSIKDDFLGL+SGP
Sbjct:   11 MLVPPSDFGPKLKDTIRRKLIEEVEGTSVGSLGFVITVTNVSDDQIQMGTIEFDTGFANVLVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGAELKAVGSIKDDFLGLVSGP 176          
BLAST of mRNA_F-serratus_M_contig62.17028.1 vs. uniprot
Match: A0A835YX29_9STRA (S1 motif domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX29_9STRA)

HSP 1 Score: 211 bits (537), Expect = 3.750e-67
Identity = 107/167 (64.07%), Postives = 132/167 (79.04%), Query Frame = 0
Query:    1 MLIPPSDFGPKLKDTVRRKLIQEVEGTSVGSLGFVITV--TEVTDDHIQLGTIEFDTGFVNVRAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAR-GYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTVGAELKAVGSIKDDFLGLIS 164
            +L+ P  FGP L + V R L+++VEG S+G+ GFVI+V      +  +++GTIE+DTG  N+   Y AICFRPF NEVLDA VS+VT+LGFFAEVGPLE+FVSR  MP+DIA  GYD+VGDMWVS ED + EIK GCGVRLRIIG+TV AELKAVGS+KDD+LGL+S
Sbjct:   11 LLLEPQFFGPNLHEVVGRLLLEQVEGMSLGNDGFVISVFSQNSANTSMEMGTIEYDTGAANIICTYEAICFRPFRNEVLDATVSNVTDLGFFAEVGPLEIFVSRFNMPEDIANTGYDSVGDMWVS-EDKEVEIKKGCGVRLRIIGITVEAELKAVGSMKDDYLGLVS 176          
BLAST of mRNA_F-serratus_M_contig62.17028.1 vs. uniprot
Match: A0A6S9LV75_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LV75_HETAK)

HSP 1 Score: 202 bits (514), Expect = 1.210e-63
Identity = 97/163 (59.51%), Postives = 128/163 (78.53%), Query Frame = 0
Query:    3 IPPSDFGPKLKDTVRRKLIQEVEGTSVGSLGFVITVTEVTDDHIQLGTIEFDTGFVNVRAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIARGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTV-GAELKAVGSIKDDFLGLIS 164
            +PP+  GPKLK+T+RR+LI+EVEG +VG LG+VITVTE+ D+ I  G IE+D+GFV    VY AICFRPF +EVLDA +S VTELGFFA+VGPL VFVSR  MP D+  GYD   ++W  SED + E++AG GVRLRI+G++V  A++ A+G++ DD+LGL+S
Sbjct:   13 LPPAFLGPKLKETIRRRLIEEVEGQAVGKLGYVITVTEMKDEAISQGLIEYDSGFVTFNVVYSAICFRPFRDEVLDATISSVTELGFFADVGPLTVFVSRHAMPADLQEGYDPARELW-QSEDREVELRAGAGVRLRIMGLSVDAADISAIGTVADDYLGLVS 174          
BLAST of mRNA_F-serratus_M_contig62.17028.1 vs. uniprot
Match: A0A7S2Y2T3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2T3_9STRA)

HSP 1 Score: 195 bits (496), Expect = 6.600e-61
Identity = 96/165 (58.18%), Postives = 128/165 (77.58%), Query Frame = 0
Query:    1 MLIPPSDFGPKLKDTVRRKLIQEVEGTSVGSLGFVITVTEVTDDHIQLGTIEFDTGFVNVRAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIARGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTV-GAELKAVGSIKDDFLGLIS 164
            +L+PP+  GPK+K+T+RR+LI+EVEGT +G  G+VITVTEV ++ ++ G I  + G V     Y AICFRPF  EVLDA V+ VTELGFFAEVGPL+VFVSR  MP D+  G+DA  ++WVS ED + E++ GCGVRLRI+G++V  A++ A+G+IKDD+LGLIS
Sbjct:   11 LLLPPAYLGPKIKETIRRRLIEEVEGTCLGKYGYVITVTEVKEEGMKTGVISNEFGEVIFHISYDAICFRPFKGEVLDANVTVVTELGFFAEVGPLQVFVSRHAMPQDLQEGFDAANEVWVS-EDKEVELRQGCGVRLRIMGLSVDAADISAIGTIKDDYLGLIS 174          
BLAST of mRNA_F-serratus_M_contig62.17028.1 vs. uniprot
Match: K3XAJ8_GLOUD (Uncharacterized protein n=27 Tax=Oomycota TaxID=4762 RepID=K3XAJ8_GLOUD)

HSP 1 Score: 188 bits (478), Expect = 3.250e-58
Identity = 95/165 (57.58%), Postives = 124/165 (75.15%), Query Frame = 0
Query:    1 MLIPPSDFGPKLKDTVRRKLIQEVEGTSVGSLGFVITVTEVTDDHIQLGTIEFDTGFVNVRAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIARGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTVGA-ELKAVGSIKDDFLGLIS 164
            +L+ P  FGPKL D +R +LI+EVEGTS+G  G+VITVTEV D+ I  G I+ ++GFV     YRAI FRPF N+VLDA V+ V +LGFFA+VGPL+VFVSR  MP D+  GYD   + W+S +D + EI+ GCGVRL+I+GV+V   E+ A+G+IKDD+LGLIS
Sbjct:   11 LLLHPMHFGPKLHDIIRLRLIEEVEGTSMGKYGYVITVTEVRDEDIGKGVIQDNSGFVCFNIRYRAILFRPFKNQVLDAVVTVVNQLGFFADVGPLQVFVSRHAMPTDLNNGYDHENNAWIS-DDREVEIRKGCGVRLKIMGVSVDVTEINAIGTIKDDYLGLIS 174          
BLAST of mRNA_F-serratus_M_contig62.17028.1 vs. uniprot
Match: A0A024TU38_9STRA (Uncharacterized protein n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TU38_9STRA)

HSP 1 Score: 179 bits (454), Expect = 1.390e-54
Identity = 91/165 (55.15%), Postives = 121/165 (73.33%), Query Frame = 0
Query:    1 MLIPPSDFGPKLKDTVRRKLIQEVEGTSVGSLGFVITVTEVTDDHIQLGTIEFDTGFVNVRAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIARGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTVGA-ELKAVGSIKDDFLGLIS 164
            +L+ P  FGPKL D +R +LI+EVEGTS+G  G+VI VTEV D+ I  G I+ ++GFV     YRAI FRPF NEVLDA V+ V +LGFFAEVGPL+VFVSR  M  D+  GYD     W+S +D + EI+ G GVRL+I+GV++   E++A+G+IKD++LG+IS
Sbjct:   11 LLLHPMHFGPKLHDIIRLRLIEEVEGTSLGKFGYVIAVTEVRDEDIGQGVIQDNSGFVCFNIAYRAILFRPFKNEVLDAVVTVVNQLGFFAEVGPLQVFVSRHAMSTDLNEGYDHEQSAWIS-QDREVEIRKGVGVRLKIMGVSIDVTEIQAIGTIKDNYLGVIS 174          
BLAST of mRNA_F-serratus_M_contig62.17028.1 vs. uniprot
Match: A0A024GUM2_9STRA (ING domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GUM2_9STRA)

HSP 1 Score: 186 bits (472), Expect = 3.770e-54
Identity = 93/165 (56.36%), Postives = 122/165 (73.94%), Query Frame = 0
Query:    1 MLIPPSDFGPKLKDTVRRKLIQEVEGTSVGSLGFVITVTEVTDDHIQLGTIEFDTGFVNVRAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIARGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTVGA-ELKAVGSIKDDFLGLIS 164
            +L+ P  FGPKL D +R +LI+EVEGTS+G  G+VITVTEV D+ I  G I+  +G+V     YRAI FRPF N+VLDA VS V +LGFFA+VGPL+VFVSR  MP D+  GYD   + W+S +D + EI+  CG+RLRI+GV++   E+ A+G+IKDD+LGLIS
Sbjct:  275 LLLHPMHFGPKLHDIIRLRLIEEVEGTSMGKYGYVITVTEVRDEDIGKGVIQDSSGYVCFNIRYRAILFRPFKNQVLDAVVSVVNQLGFFADVGPLQVFVSRHAMPTDLNNGYDHENNAWIS-DDREVEIRKSCGIRLRIMGVSIDVTEINAIGTIKDDYLGLIS 438          
BLAST of mRNA_F-serratus_M_contig62.17028.1 vs. uniprot
Match: A0A7S2HLJ0_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HLJ0_9STRA)

HSP 1 Score: 175 bits (444), Expect = 4.580e-53
Identity = 87/168 (51.79%), Postives = 119/168 (70.83%), Query Frame = 0
Query:    1 MLIPPSDFGPKLKDTVRRKLIQEVEGTSVGSLGFVITVTEVTDD-HIQLGTIEFDTGFVNVRAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIARGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTVGA-ELKAVGSIKDDFLGLISGP 166
            +LI P   GPKLK T+RR+LI E+EG+ +  +G+V+ VT++ D   I+ G IE++TG  +    Y A+ FRPF NEVLDA V+ V +LGFF + GPL+VFVSR  +P DI  G+D   DMWVS ED + EIK GC VRLRI+G+ + A ++ AVG+++DDFLG+I  P
Sbjct:   11 VLISPEYLGPKLKQTIRRRLIDEIEGSCINKIGYVVCVTDINDTTDIEAGLIEYETGHTSFMVTYGAVLFRPFKNEVLDATVTTVNQLGFFCKAGPLQVFVSRYNLPGDIREGFDPNQDMWVS-EDGEVEIKRGCVVRLRIMGLAMEASKINAVGNMRDDFLGVIELP 177          
BLAST of mRNA_F-serratus_M_contig62.17028.1 vs. uniprot
Match: F0XYC1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYC1_AURAN)

HSP 1 Score: 172 bits (436), Expect = 7.980e-52
Identity = 87/165 (52.73%), Postives = 115/165 (69.70%), Query Frame = 0
Query:    1 MLIPPSDFGPKLKDTVRRKLIQEVEGTSVGSLGFVITVTEVTDDHIQLGTIEFDTGFVNVRAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIARGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTVGA-ELKAVGSIKDDFLGLIS 164
            ML+ P  FG ++K  ++ ++++ VEG  +G  G+V+ V +V DD +  G +++DTG V+V A Y AI  RPF NEVLDA V+HV ELGFF E GPL VFVSR  MP D+  GYDA  D WVS +D + EIK  C VRLR++GV   A ++ AVG+IKDD+LGLIS
Sbjct:   13 MLLHPQFFGGRMKSFIKDEIMKNVEGKCLGREGYVVAVLDVKDDDVDTGIVDYDTGCVSVNARYSAILLRPFKNEVLDAVVTHVNELGFFTEAGPLTVFVSRHAMPPDLQEGYDADVDSWVS-DDKEVEIKTKCVVRLRLLGVMCDATQITAVGTIKDDYLGLIS 176          
BLAST of mRNA_F-serratus_M_contig62.17028.1 vs. uniprot
Match: A0A425DP05_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425DP05_9STRA)

HSP 1 Score: 172 bits (436), Expect = 3.780e-51
Identity = 87/161 (54.04%), Postives = 117/161 (72.67%), Query Frame = 0
Query:    1 MLIPPSDFGPKLKDTVRRKLIQEVEGTSVGSLGFVITVTEVTDDHIQLGTIEFDTGFVNVRAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIARGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTVGA-ELKAVGSIKDDFL 160
            +L+ P  FGPKL D +R +LI+EVEGTS+G  G+VI VTEV D+ I  G I+ ++G+V     YRAI FRPF NEVLDA V+ V +LGFFAEVGPL+VFVSR  M  D+  GYD     W+S +D + EI+ G GVRL+I+GV++   E++A+G+IKD++L
Sbjct:   11 LLLHPMHFGPKLHDIIRLRLIEEVEGTSLGKFGYVIAVTEVRDEDIGQGVIQDNSGYVCFNIAYRAILFRPFKNEVLDAVVTVVNQLGFFAEVGPLQVFVSRHAMSTDLNEGYDHEQSAWIS-QDREVEIRKGVGVRLKIMGVSIDVTEIQAIGTIKDNYL 170          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig62.17028.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX58_ECTSI2.450e-10691.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YX29_9STRA3.750e-6764.07S1 motif domain-containing protein n=1 Tax=Tribone... [more]
A0A6S9LV75_HETAK1.210e-6359.51Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2Y2T3_9STRA6.600e-6158.18Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K3XAJ8_GLOUD3.250e-5857.58Uncharacterized protein n=27 Tax=Oomycota TaxID=47... [more]
A0A024TU38_9STRA1.390e-5455.15Uncharacterized protein n=8 Tax=Saprolegniaceae Ta... [more]
A0A024GUM2_9STRA3.770e-5456.36ING domain-containing protein n=1 Tax=Albugo candi... [more]
A0A7S2HLJ0_9STRA4.580e-5351.79Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
F0XYC1_AURAN7.980e-5252.73Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A425DP05_9STRA3.780e-5154.04Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003029S1 domainPFAMPF00575S1coord: 70..146
e-value: 3.9E-9
score: 36.7
NoneNo IPR availableGENE3D2.40.50.140coord: 74..163
e-value: 6.6E-25
score: 88.9
NoneNo IPR availablePANTHERPTHR12709:SF4DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7coord: 1..161
NoneNo IPR availablePANTHERPTHR12709DNA-DIRECTED RNA POLYMERASE II, IIIcoord: 1..161
IPR005576RNA polymerase Rpb7-like , N-terminalPFAMPF03876SHS2_Rpb7-Ncoord: 3..69
e-value: 4.5E-11
score: 43.0
IPR036898RNA polymerase Rpb7-like, N-terminal domain superfamilyGENE3D3.30.1490.120coord: 1..73
e-value: 1.3E-18
score: 69.0
IPR036898RNA polymerase Rpb7-like, N-terminal domain superfamilySUPERFAMILY88798N-terminal, heterodimerisation domain of RBP7 (RpoE)coord: 2..70
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 71..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig62contigF-serratus_M_contig62:938272..941415 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig62.17028.1mRNA_F-serratus_M_contig62.17028.1Fucus serratus malemRNAF-serratus_M_contig62 937738..941433 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig62.17028.1 ID=prot_F-serratus_M_contig62.17028.1|Name=mRNA_F-serratus_M_contig62.17028.1|organism=Fucus serratus male|type=polypeptide|length=168bp
MLIPPSDFGPKLKDTVRRKLIQEVEGTSVGSLGFVITVTEVTDDHIQLGT
IEFDTGFVNVRAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFV
SRLGMPDDIARGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTVGAELK
AVGSIKDDFLGLISGPA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003029S1_domain
IPR005576Rpb7-like_N
IPR036898RNA_pol_Rpb7-like_N_sf
IPR012340NA-bd_OB-fold