mRNA_F-serratus_M_contig62.17028.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig62.17028.1
Unique NamemRNA_F-serratus_M_contig62.17028.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig62.17028.1 vs. uniprot
Match: D7FX58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX58_ECTSI)

HSP 1 Score: 320 bits (819), Expect = 4.220e-107
Identity = 157/172 (91.28%), Postives = 164/172 (95.35%), Query Frame = 1 
Query:    1 KELTRPMLIPPSDFGPKLKDTVRRKLIQEVEGTSVGSLGFVITVTEVTDDHIQLGTIEFDTGFVNVRAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIARGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTVGAELKAVGSIKDDFLGLISGP 516
            KEL RPML+PPSDFGPKLKDT+RRKLI+EVEGTSVGSLGFVITVT V+DD IQ+GTIEFDTGF NV  VYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIA GYD VGDMWVSSEDSDTEIK+GCGVRLRIIGVTVGAELKAVGSIKDDFLGL+SGP
Sbjct:    5 KELRRPMLVPPSDFGPKLKDTIRRKLIEEVEGTSVGSLGFVITVTNVSDDQIQMGTIEFDTGFANVLVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGAELKAVGSIKDDFLGLVSGP 176
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BLAST of mRNA_F-serratus_M_contig62.17028.1 vs. uniprot
Match: A0A835YX29_9STRA (S1 motif domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX29_9STRA)

HSP 1 Score: 214 bits (545), Expect = 1.390e-65
Identity = 109/173 (63.01%), Postives = 135/173 (78.03%), Query Frame = 1 
Query:    1 KELTRPMLIPPSDFGPKLKDTVRRKLIQEVEGTSVGSLGFVITV--TEVTDDHIQLGTIEFDTGFVNVRAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAR-GYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTVGAELKAVGSIKDDFLGLIS 510
            K L + +L+ P  FGP L + V R L+++VEG S+G+ GFVI+V      +  +++GTIE+DTG  N+   Y AICFRPF NEVLDA VS+VT+LGFFAEVGPLE+FVSR  MP+DIA  GYD+VGDMWVS ED + EIK GCGVRLRIIG+TV AELKAVGS+KDD+LGL+S
Sbjct:    5 KTLKKDLLLEPQFFGPNLHEVVGRLLLEQVEGMSLGNDGFVISVFSQNSANTSMEMGTIEYDTGAANIICTYEAICFRPFRNEVLDATVSNVTDLGFFAEVGPLEIFVSRFNMPEDIANTGYDSVGDMWVS-EDKEVEIKKGCGVRLRIIGITVEAELKAVGSMKDDYLGLVS 176
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BLAST of mRNA_F-serratus_M_contig62.17028.1 vs. uniprot
Match: A0A6S9LV75_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LV75_HETAK)

HSP 1 Score: 210 bits (534), Expect = 6.490e-64
Identity = 101/171 (59.06%), Postives = 134/171 (78.36%), Query Frame = 1 
Query:    1 KELTRPMLIPPSDFGPKLKDTVRRKLIQEVEGTSVGSLGFVITVTEVTDDHIQLGTIEFDTGFVNVRAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIARGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTV-GAELKAVGSIKDDFLGLIS 510
            K+LTR + +PP+  GPKLK+T+RR+LI+EVEG +VG LG+VITVTE+ D+ I  G IE+D+GFV    VY AICFRPF +EVLDA +S VTELGFFA+VGPL VFVSR  MP D+  GYD   ++W  SED + E++AG GVRLRI+G++V  A++ A+G++ DD+LGL+S
Sbjct:    5 KQLTRELQLPPAFLGPKLKETIRRRLIEEVEGQAVGKLGYVITVTEMKDEAISQGLIEYDSGFVTFNVVYSAICFRPFRDEVLDATISSVTELGFFADVGPLTVFVSRHAMPADLQEGYDPARELW-QSEDREVELRAGAGVRLRIMGLSVDAADISAIGTVADDYLGLVS 174
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BLAST of mRNA_F-serratus_M_contig62.17028.1 vs. uniprot
Match: A0A7S2Y2T3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2T3_9STRA)

HSP 1 Score: 204 bits (519), Expect = 1.170e-61
Identity = 101/171 (59.06%), Postives = 133/171 (77.78%), Query Frame = 1 
Query:    1 KELTRPMLIPPSDFGPKLKDTVRRKLIQEVEGTSVGSLGFVITVTEVTDDHIQLGTIEFDTGFVNVRAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIARGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTV-GAELKAVGSIKDDFLGLIS 510
            KELTR +L+PP+  GPK+K+T+RR+LI+EVEGT +G  G+VITVTEV ++ ++ G I  + G V     Y AICFRPF  EVLDA V+ VTELGFFAEVGPL+VFVSR  MP D+  G+DA  ++WVS ED + E++ GCGVRLRI+G++V  A++ A+G+IKDD+LGLIS
Sbjct:    5 KELTRELLLPPAYLGPKIKETIRRRLIEEVEGTCLGKYGYVITVTEVKEEGMKTGVISNEFGEVIFHISYDAICFRPFKGEVLDANVTVVTELGFFAEVGPLQVFVSRHAMPQDLQEGFDAANEVWVS-EDKEVELRQGCGVRLRIMGLSVDAADISAIGTIKDDYLGLIS 174
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BLAST of mRNA_F-serratus_M_contig62.17028.1 vs. uniprot
Match: K3XAJ8_GLOUD (Uncharacterized protein n=27 Tax=Oomycota TaxID=4762 RepID=K3XAJ8_GLOUD)

HSP 1 Score: 194 bits (494), Expect = 6.100e-58
Identity = 98/171 (57.31%), Postives = 129/171 (75.44%), Query Frame = 1 
Query:    1 KELTRPMLIPPSDFGPKLKDTVRRKLIQEVEGTSVGSLGFVITVTEVTDDHIQLGTIEFDTGFVNVRAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIARGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTVGA-ELKAVGSIKDDFLGLIS 510
            K+L+R +L+ P  FGPKL D +R +LI+EVEGTS+G  G+VITVTEV D+ I  G I+ ++GFV     YRAI FRPF N+VLDA V+ V +LGFFA+VGPL+VFVSR  MP D+  GYD   + W+S +D + EI+ GCGVRL+I+GV+V   E+ A+G+IKDD+LGLIS
Sbjct:    5 KQLSRDLLLHPMHFGPKLHDIIRLRLIEEVEGTSMGKYGYVITVTEVRDEDIGKGVIQDNSGFVCFNIRYRAILFRPFKNQVLDAVVTVVNQLGFFADVGPLQVFVSRHAMPTDLNNGYDHENNAWIS-DDREVEIRKGCGVRLKIMGVSVDVTEINAIGTIKDDYLGLIS 174
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BLAST of mRNA_F-serratus_M_contig62.17028.1 vs. uniprot
Match: A0A024TU38_9STRA (Uncharacterized protein n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TU38_9STRA)

HSP 1 Score: 184 bits (468), Expect = 4.710e-54
Identity = 94/171 (54.97%), Postives = 125/171 (73.10%), Query Frame = 1 
Query:    1 KELTRPMLIPPSDFGPKLKDTVRRKLIQEVEGTSVGSLGFVITVTEVTDDHIQLGTIEFDTGFVNVRAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIARGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTVGA-ELKAVGSIKDDFLGLIS 510
            K+L R +L+ P  FGPKL D +R +LI+EVEGTS+G  G+VI VTEV D+ I  G I+ ++GFV     YRAI FRPF NEVLDA V+ V +LGFFAEVGPL+VFVSR  M  D+  GYD     W+S +D + EI+ G GVRL+I+GV++   E++A+G+IKD++LG+IS
Sbjct:    5 KQLKRELLLHPMHFGPKLHDIIRLRLIEEVEGTSLGKFGYVIAVTEVRDEDIGQGVIQDNSGFVCFNIAYRAILFRPFKNEVLDAVVTVVNQLGFFAEVGPLQVFVSRHAMSTDLNEGYDHEQSAWIS-QDREVEIRKGVGVRLKIMGVSIDVTEIQAIGTIKDNYLGVIS 174
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BLAST of mRNA_F-serratus_M_contig62.17028.1 vs. uniprot
Match: A0A024GUM2_9STRA (ING domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GUM2_9STRA)

HSP 1 Score: 192 bits (488), Expect = 7.810e-54
Identity = 96/171 (56.14%), Postives = 127/171 (74.27%), Query Frame = 1 
Query:    1 KELTRPMLIPPSDFGPKLKDTVRRKLIQEVEGTSVGSLGFVITVTEVTDDHIQLGTIEFDTGFVNVRAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIARGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTVGA-ELKAVGSIKDDFLGLIS 510
            K+L+R +L+ P  FGPKL D +R +LI+EVEGTS+G  G+VITVTEV D+ I  G I+  +G+V     YRAI FRPF N+VLDA VS V +LGFFA+VGPL+VFVSR  MP D+  GYD   + W+S +D + EI+  CG+RLRI+GV++   E+ A+G+IKDD+LGLIS
Sbjct:  269 KQLSRDLLLHPMHFGPKLHDIIRLRLIEEVEGTSMGKYGYVITVTEVRDEDIGKGVIQDSSGYVCFNIRYRAILFRPFKNQVLDAVVSVVNQLGFFADVGPLQVFVSRHAMPTDLNNGYDHENNAWIS-DDREVEIRKSCGIRLRIMGVSIDVTEINAIGTIKDDYLGLIS 438
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BLAST of mRNA_F-serratus_M_contig62.17028.1 vs. uniprot
Match: A0A7S2HLJ0_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HLJ0_9STRA)

HSP 1 Score: 178 bits (452), Expect = 1.180e-51
Identity = 89/174 (51.15%), Postives = 122/174 (70.11%), Query Frame = 1 
Query:    1 KELTRPMLIPPSDFGPKLKDTVRRKLIQEVEGTSVGSLGFVITVTEVTDD-HIQLGTIEFDTGFVNVRAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIARGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTVGA-ELKAVGSIKDDFLGLISGP 516
            K+L   +LI P   GPKLK T+RR+LI E+EG+ +  +G+V+ VT++ D   I+ G IE++TG  +    Y A+ FRPF NEVLDA V+ V +LGFF + GPL+VFVSR  +P DI  G+D   DMWVS ED + EIK GC VRLRI+G+ + A ++ AVG+++DDFLG+I  P
Sbjct:    5 KKLRHEVLISPEYLGPKLKQTIRRRLIDEIEGSCINKIGYVVCVTDINDTTDIEAGLIEYETGHTSFMVTYGAVLFRPFKNEVLDATVTTVNQLGFFCKAGPLQVFVSRYNLPGDIREGFDPNQDMWVS-EDGEVEIKRGCVVRLRIMGLAMEASKINAVGNMRDDFLGVIELP 177
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BLAST of mRNA_F-serratus_M_contig62.17028.1 vs. uniprot
Match: A0A425DP05_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425DP05_9STRA)

HSP 1 Score: 177 bits (450), Expect = 1.200e-50
Identity = 90/167 (53.89%), Postives = 121/167 (72.46%), Query Frame = 1 
Query:    1 KELTRPMLIPPSDFGPKLKDTVRRKLIQEVEGTSVGSLGFVITVTEVTDDHIQLGTIEFDTGFVNVRAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIARGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTVGA-ELKAVGSIKDDFL 498
            K+L R +L+ P  FGPKL D +R +LI+EVEGTS+G  G+VI VTEV D+ I  G I+ ++G+V     YRAI FRPF NEVLDA V+ V +LGFFAEVGPL+VFVSR  M  D+  GYD     W+S +D + EI+ G GVRL+I+GV++   E++A+G+IKD++L
Sbjct:    5 KQLKRELLLHPMHFGPKLHDIIRLRLIEEVEGTSLGKFGYVIAVTEVRDEDIGQGVIQDNSGYVCFNIAYRAILFRPFKNEVLDAVVTVVNQLGFFAEVGPLQVFVSRHAMSTDLNEGYDHEQSAWIS-QDREVEIRKGVGVRLKIMGVSIDVTEIQAIGTIKDNYL 170
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BLAST of mRNA_F-serratus_M_contig62.17028.1 vs. uniprot
Match: F0XYC1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYC1_AURAN)

HSP 1 Score: 173 bits (438), Expect = 1.560e-49
Identity = 88/170 (51.76%), Postives = 117/170 (68.82%), Query Frame = 1 
Query:    4 ELTRPMLIPPSDFGPKLKDTVRRKLIQEVEGTSVGSLGFVITVTEVTDDHIQLGTIEFDTGFVNVRAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIARGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTVGA-ELKAVGSIKDDFLGLIS 510
            +L   ML+ P  FG ++K  ++ ++++ VEG  +G  G+V+ V +V DD +  G +++DTG V+V A Y AI  RPF NEVLDA V+HV ELGFF E GPL VFVSR  MP D+  GYDA  D WVS +D + EIK  C VRLR++GV   A ++ AVG+IKDD+LGLIS
Sbjct:    8 DLIYEMLLHPQFFGGRMKSFIKDEIMKNVEGKCLGREGYVVAVLDVKDDDVDTGIVDYDTGCVSVNARYSAILLRPFKNEVLDAVVTHVNELGFFTEAGPLTVFVSRHAMPPDLQEGYDADVDSWVS-DDKEVEIKTKCVVRLRLLGVMCDATQITAVGTIKDDYLGLIS 176
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig62.17028.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX58_ECTSI4.220e-10791.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YX29_9STRA1.390e-6563.01S1 motif domain-containing protein n=1 Tax=Tribone... [more]
A0A6S9LV75_HETAK6.490e-6459.06Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2Y2T3_9STRA1.170e-6159.06Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K3XAJ8_GLOUD6.100e-5857.31Uncharacterized protein n=27 Tax=Oomycota TaxID=47... [more]
A0A024TU38_9STRA4.710e-5454.97Uncharacterized protein n=8 Tax=Saprolegniaceae Ta... [more]
A0A024GUM2_9STRA7.810e-5456.14ING domain-containing protein n=1 Tax=Albugo candi... [more]
A0A7S2HLJ0_9STRA1.180e-5151.15Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A425DP05_9STRA1.200e-5053.89Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
F0XYC1_AURAN1.560e-4951.76Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig62contigF-serratus_M_contig62:937738..941433 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score314.7
Seed ortholog evalue2.6e-83
Seed eggNOG ortholog2880.D7FX58
Preferred namePOLR2G
KEGG rclassRC00003,RC00060,RC00181,RC00496,RC02795
KEGG koko:K03015,ko:K09186
KEGG ReactionR00435,R00441,R00442,R00443,R03875,R03938,R04866,R04867
KEGG Pathwayko00230,ko00240,ko00310,ko01100,ko03020,ko04934,ko05016,ko05169,ko05202,map00230,map00240,map00310,map01100,map03020,map04934,map05016,map05169,map05202
KEGG ModuleM00180
Hectar predicted targeting categoryother localisation
GOsGO:0000291,GO:0000375,GO:0000377,GO:0000398,GO:0000428,GO:0000932,GO:0000956,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003723,GO:0003727,GO:0003824,GO:0003899,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006351,GO:0006352,GO:0006354,GO:0006366,GO:0006367,GO:0006368,GO:0006370,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006417,GO:0006446,GO:0006725,GO:0006807,GO:0006915,GO:0006950,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008150,GO:0008152,GO:0008219,GO:0008380,GO:0008543,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009301,GO:0009452,GO:0009719,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010590,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0012501,GO:0016070,GO:0016071,GO:0016073,GO:0016591,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0023052,GO:0030880,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031331,GO:0031369,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032774,GO:0032991,GO:0033554,GO:0034062,GO:0034248,GO:0034250,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0034660,GO:0035770,GO:0036260,GO:0036464,GO:0042221,GO:0042795,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044344,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045727,GO:0045935,GO:0045948,GO:0046483,GO:0046700,GO:0048518,GO:0048519,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051252,GO:0051254,GO:0051302,GO:0051716,GO:0055029,GO:0060147,GO:0060211,GO:0060213,GO:0060255,GO:0060964,GO:0060966,GO:0060968,GO:0061013,GO:0061014,GO:0061695,GO:0065007,GO:0070013,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071704,GO:0071774,GO:0080090,GO:0090304,GO:0097159,GO:0097393,GO:0097394,GO:0097659,GO:0097747,GO:0098781,GO:0140098,GO:1900151,GO:1900153,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902494,GO:1903311,GO:1903313,GO:1990234,GO:1990904,GO:2000112
EggNOG free text desc.positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
EggNOG OGsCOG1095@1,KOG3298@2759
EC2.1.1.43
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01611,ko00000,ko00001,ko00002,ko01000,ko03000,ko03019,ko03021,ko03036,ko03400
Exons5
Model size1056
Cds size504
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931922.1190412-UTR-F-serratus_M_contig62:937737..9382711622931922.1190412-UTR-F-serratus_M_contig62:937737..938271Fucus serratus maleUTRF-serratus_M_contig62 937738..938271 -
1690964058.7722533-UTR-F-serratus_M_contig62:937737..9382711690964058.7722533-UTR-F-serratus_M_contig62:937737..938271Fucus serratus maleUTRF-serratus_M_contig62 937738..938271 -
1622931922.2861698-UTR-F-serratus_M_contig62:941415..9414331622931922.2861698-UTR-F-serratus_M_contig62:941415..941433Fucus serratus maleUTRF-serratus_M_contig62 941416..941433 -
1690964058.8420005-UTR-F-serratus_M_contig62:941415..9414331690964058.8420005-UTR-F-serratus_M_contig62:941415..941433Fucus serratus maleUTRF-serratus_M_contig62 941416..941433 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931922.1399572-CDS-F-serratus_M_contig62:938271..9383281622931922.1399572-CDS-F-serratus_M_contig62:938271..938328Fucus serratus maleCDSF-serratus_M_contig62 938272..938328 -
1690964058.788516-CDS-F-serratus_M_contig62:938271..9383281690964058.788516-CDS-F-serratus_M_contig62:938271..938328Fucus serratus maleCDSF-serratus_M_contig62 938272..938328 -
1622931922.160361-CDS-F-serratus_M_contig62:939225..9393631622931922.160361-CDS-F-serratus_M_contig62:939225..939363Fucus serratus maleCDSF-serratus_M_contig62 939226..939363 -
1690964058.8029952-CDS-F-serratus_M_contig62:939225..9393631690964058.8029952-CDS-F-serratus_M_contig62:939225..939363Fucus serratus maleCDSF-serratus_M_contig62 939226..939363 -
1622931922.1807723-CDS-F-serratus_M_contig62:939896..9400851622931922.1807723-CDS-F-serratus_M_contig62:939896..940085Fucus serratus maleCDSF-serratus_M_contig62 939897..940085 -
1690964058.8121808-CDS-F-serratus_M_contig62:939896..9400851690964058.8121808-CDS-F-serratus_M_contig62:939896..940085Fucus serratus maleCDSF-serratus_M_contig62 939897..940085 -
1622931922.2349582-CDS-F-serratus_M_contig62:940832..9409021622931922.2349582-CDS-F-serratus_M_contig62:940832..940902Fucus serratus maleCDSF-serratus_M_contig62 940833..940902 -
1690964058.8232512-CDS-F-serratus_M_contig62:940832..9409021690964058.8232512-CDS-F-serratus_M_contig62:940832..940902Fucus serratus maleCDSF-serratus_M_contig62 940833..940902 -
1622931922.2627358-CDS-F-serratus_M_contig62:941365..9414151622931922.2627358-CDS-F-serratus_M_contig62:941365..941415Fucus serratus maleCDSF-serratus_M_contig62 941366..941415 -
1690964058.8323655-CDS-F-serratus_M_contig62:941365..9414151690964058.8323655-CDS-F-serratus_M_contig62:941365..941415Fucus serratus maleCDSF-serratus_M_contig62 941366..941415 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig62.17028.1prot_F-serratus_M_contig62.17028.1Fucus serratus malepolypeptideF-serratus_M_contig62 938272..941415 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig62.17028.1

>prot_F-serratus_M_contig62.17028.1 ID=prot_F-serratus_M_contig62.17028.1|Name=mRNA_F-serratus_M_contig62.17028.1|organism=Fucus serratus male|type=polypeptide|length=168bp
MLIPPSDFGPKLKDTVRRKLIQEVEGTSVGSLGFVITVTEVTDDHIQLGT
IEFDTGFVNVRAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFV
SRLGMPDDIARGYDAVGDMWVSSEDSDTEIKAGCGVRLRIIGVTVGAELK
AVGSIKDDFLGLISGPA*
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mRNA from alignment at F-serratus_M_contig62:937738..941433-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig62.17028.1 ID=mRNA_F-serratus_M_contig62.17028.1|Name=mRNA_F-serratus_M_contig62.17028.1|organism=Fucus serratus male|type=mRNA|length=3696bp|location=Sequence derived from alignment at F-serratus_M_contig62:937738..941433- (Fucus serratus male)
AAGGAGCTGACGCGACCCATGCTTATCCCGCCGTCGGACTTCGGCCCCAA
GCTCAAGGACACTGTTCGGTAAGCCGCGCGGTTCAGACCTCGCTCCTCCG
AGCTGGCGAACCTCCTTCGCAGCCCCTTGCTCTCACCTCTCTCATCACCT
CTTCCCCGGTGGAGGATAAAACGGAAGACTATACTTTTTTAATACCGCGC
GACGGCGAAAATTTTAGTACACGCTTCCAAAGAAAAAGGAACACACCTGA
AACCGGAAAAATGGCAAGACGCAGCGAAGGCGTACCCCGTCCCGCGGATC
AAATCGATTCTTGCGACTCGCGAGACCAAATTCTCAGGCACGCACGGGGA
CATGGGAATATTCATTTTCCCTGTTCAGCTGACCACGAGCAGGATTGGCA
ACCTTACACGGTTGATCCATCCTCTGCTATACGTGATGACCATACATACA
TACATTCATACATCTCGTCATCGTATCTTTCGAGCCCGTAATCGACCGCC
AACCCCTCCCCTCTCTCCGGCCGTTTTCTAGGCGAAAGCTTATTCAAGAG
GTGGAGGGCACCTCGGTAGGAAGTCTCGGTTTCGTCATTACGGTCACCGA
GGTGTGTGGTCGGGAAAGGGGCGTCGTGTTGTCGCGCGGTGCCGCCTTTT
CTTCTTGGGGGTGTTTTGTCTTGCGTCACCCGATGGATGCACGCACGTGC
GCCCCTCGCTTTTTTGACCCGGCCGGGCGGAGTGTGAACGGTTTGGGTGA
CCGCTGATATACTTTAGCTATCTCTCGTGATACTGGTGTGGATGGTTGCG
TGTCCGGGACGCGAGTTTTCCTTTTTAAAAAACAACAACTAGGTTTTGTA
CCTTCCCAGGAAGGCATTGTGTACCCGCAGCATCTTTAGGAGAGGGCGGA
AACGCAAGCCATAAAATAGTTATAAGTAGTGGCAGCACTTTTATCTACCG
TAATCCACACCGATTGTGTCCGTATTCGTCCTCCTTCGACATGTGAACCT
TGAGATCGTTACCGATTAGTGACGGGTTGTGCCTCGCGAGCCAGCGCAAC
GCGCGTCTCATTTGAAATCGCGTTGTAGTTATGCGCGTTTTCACCTCGAG
TAACATGTAACACGCCATGATGGAAGCTACGGTGATAGGTTATAATGAAC
GGTCTCATTAGTCCATTGCTCCTATAGGGAAGAATGCTCCACATTCTGCG
ACGTCTCTAGTTATCATTCTACAACGACTTGCACGAAGCCCCCCCCCCCC
CCATAATGCTCGCACCTGGGATTGATTGCGCATGAGCATCTGTCGCCTGC
CACCCTTCCCCCCGTCCCCTCTACCCTATCGCAAATCCTCCTCCTCAGGT
CACCGACGATCACATCCAGCTCGGCACCATAGAATTCGACACGGGATTCG
TTAACGTGCGTGCGGTGTACCGCGCCATCTGCTTCCGCCCGTTCGTGAAC
GAGGTGCTCGATGCCGCCGTAAGCCACGTGACTGAGCTGGGATTCTTCGC
GGAGGTCGGACCGCTCGAGGTGTTCGTGTCCCGGTTGGTGAGAGCAAGCG
AGCCCTCGCACACCGTACGTGTAGCAGGGGAGGAAAGCAAGGGGACGCGA
TAGACGCACAAGCTATCTTATCTAGTATGGTTTCGAAGGGGCGACCTCGA
TGACCCCCCTTACCCCATGGAGGTGATAATTCGTGGACTATGACGTGTAA
GATGAAATGCGCAAAACGTACGGCTCTCATGCGGAAATGGGATGAGCCAA
GCAACAGCGCTACTGTAGCAGGAGACTGATGACCATGAGCTCAATGCCCG
CAGTAAACAATCGCCTCAACAAAGAAATATGTCGAATCAAACCGTGGTTT
CGAAACACGCCTCCCCAACAAATTAGACAAGTCGAACTATTACAGATGCG
TACAGTAGCAGTAGGTTCTGGCCATGTGACCACGCGCCTTGCGTTCACCA
GGAGGCATGGCCTTACCGAGAGGTGGAGTTCTGCCCGTCGTGGGTTTTCC
CCGCTGATACGTGTTACTCTGTGCGCCCGTCCCCCGGGCCTTATTCTAAT
ACATCCTCTTCTTTGGGCAGGGAATGCCGGACGATATCGCGAGAGGCTAT
GACGCCGTTGGTGACATGTGGGTGTCCTCAGAGGACTCCGATACCGAGAT
CAAGGCCGGCTGCGGCGTTCGTTTGCGCATCATCGGGGTCACGGTTGGGG
CAGAGTTGGTGAGAACACCCAGGGAAAGAGGGGGGGTTAAGAGCCTTCTG
CTGCCTCCCTTCCCGCGCTCAACCGGGCTGCTGTGGGGTTGACGTACGAT
GTATAAAACCTGGAAGGCGTTCTCGAGTCCGTGTACACCGTCGCTCTCAC
GTTCCATCATTGCGGCCGGTTGCTTCGTTTCGGAGCCTTGAGCGAGGGTT
TTCATTCGCACCCTGCTCCCCCCCCCCTTCCCTCGTCTCCTCTCCTCCCA
TCTCCTCCCATGTCACCGCGTGTGGCTTCCTGCGAAACCGACGTATACAG
TAAAAATTACGGAGTGGATAATGTATCACGGGACCTCCACTTATTATGCG
TAAACGTCTGATTCGGACGAGAATGGGGTTGAATAGAGTTATAGTTATGT
CACAAAGAATACGAAGAATGCTTAATTTTGTGTTTACTACCTCGAGCTTT
TGATAAGAGGTCGCCTACGACAGCGACGACCCCCAAGAATACCGATTGAG
TGCCTTCCTTTCGGGGGGGGGCATGCTTTCCGCGACAAAACAAACGATCT
TCCAGCCCGTACTGTCCGTCGGGTACTTTGTCATAGGCAAAACAAAACTT
AAGCTTCAACCTTGCGCCTGCTTTCCGGTATCCTACGTACCTCAGCTCAC
GACGAGGAATGCTGGCACTCAAAAAGCGCACGGCACTCACATTGGCCGAT
TCGCGCGCTCGCCGTCTCGAAAGTTTCTTCTTCTTCTTTTTCTTCTTTAT
TTGTCACCGCGATGGCGCCTTGTTTTGGCTCACTACATACCAAGCGCTCA
ACGCTCTCTCCTTTACGGTGCTCTCGCTTGACGTCGCCCTATCCCTTTTC
GCCCCTCTTTCCTTATACCGCCCTCCGCAACCCCTTAAACGCCCTTCCCG
TACAGAAAGCGGTAGGAAGCATCAAGGACGATTTTCTCGGCCTTATCTCT
GGGCCGGCATAGCTCTAGCATGCCTGGTGTATATTATATATGCCAGGTCG
CAATCAATGACCGTTGTGATCTACAGAAGTTGAAGGAAGGGTTTCGCACT
CAAATGAGCTTTTTTATGGTGTGTGCTTTATCAGTGGTAATAGATTTTTG
GTACCGGGTTGTACGTCCATTGTTAATATAGTAATATCTTGTTTCGGCGG
CGCGAAATGTATTTTACCTTGTTGATTGTTGTGCAAGAAGGCCTGTTGTT
TTTTATTTTTCGGCAACGCAACGTGAGAGAAAGAAACCGCCGTGATGTGT
CCGCCGCCATCTCTCCTTTTGTTACTCTGATAGTAATATAGTATAGTAAC
AATAGCTTATTAATAGAAGCCAGAGACTGATGTGCTGATTTGGGGGACCC
CAGCTTCCTTCTGTCGCGTAATATAGCAGGCGTGTGTGCTGATGAGGGAC
CTCCCCTTTAAAGACCTATTAATAGCACTGTTGTTAACAGGGCGACTTGA
GGTAAAACATTGATTTGTACATGGGACCATGTTTTTCTAGAGTTCG
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Coding sequence (CDS) from alignment at F-serratus_M_contig62:937738..941433-

>mRNA_F-serratus_M_contig62.17028.1 ID=mRNA_F-serratus_M_contig62.17028.1|Name=mRNA_F-serratus_M_contig62.17028.1|organism=Fucus serratus male|type=CDS|length=1008bp|location=Sequence derived from alignment at F-serratus_M_contig62:937738..941433- (Fucus serratus male)
ATGCTTATCCCGCCGTCGGACTTCGGCCCCAAGCTCAAGGACACTGTTCG
ATGCTTATCCCGCCGTCGGACTTCGGCCCCAAGCTCAAGGACACTGTTCG
GCGAAAGCTTATTCAAGAGGTGGAGGGCACCTCGGTAGGAAGTCTCGGTT
TCGTCATTACGGTCACCGAGGCGAAAGCTTATTCAAGAGGTGGAGGGCAC
CTCGGTAGGAAGTCTCGGTTTCGTCATTACGGTCACCGAGGTCACCGACG
ATCACATCCAGCTCGGCACCATAGAATTCGACACGGGATTCGTTAACGTG
CGTGCGGTGTACCGCGCCATCTGCTTCCGCCCGTTCGTGAACGAGGTGCT
CGATGCCGCCGTAAGCCACGTGACTGAGCTGGGATTCTTCGCGGAGGTCG
GACCGCTCGAGGTGTTCGTGTCCCGGTTGGTCACCGACGATCACATCCAG
CTCGGCACCATAGAATTCGACACGGGATTCGTTAACGTGCGTGCGGTGTA
CCGCGCCATCTGCTTCCGCCCGTTCGTGAACGAGGTGCTCGATGCCGCCG
TAAGCCACGTGACTGAGCTGGGATTCTTCGCGGAGGTCGGACCGCTCGAG
GTGTTCGTGTCCCGGTTGGGAATGCCGGACGATATCGCGAGAGGCTATGA
CGCCGTTGGTGACATGTGGGTGTCCTCAGAGGACTCCGATACCGAGATCA
AGGCCGGCTGCGGCGTTCGTTTGCGCATCATCGGGGTCACGGTTGGGGCA
GAGTTGGGAATGCCGGACGATATCGCGAGAGGCTATGACGCCGTTGGTGA
CATGTGGGTGTCCTCAGAGGACTCCGATACCGAGATCAAGGCCGGCTGCG
GCGTTCGTTTGCGCATCATCGGGGTCACGGTTGGGGCAGAGTTGAAAGCG
GTAGGAAGCATCAAGGACGATTTTCTCGGCCTTATCTCTGGGCCGGCATA
GAAAGCGGTAGGAAGCATCAAGGACGATTTTCTCGGCCTTATCTCTGGGC
CGGCATAG
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