mRNA_F-serratus_M_contig121.1649.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig121.1649.1
Unique NamemRNA_F-serratus_M_contig121.1649.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig121.1649.1 vs. uniprot
Match: D8LE19_ECTSI (Rab28, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE19_ECTSI)

HSP 1 Score: 367 bits (942), Expect = 3.380e-127
Identity = 177/208 (85.10%), Postives = 192/208 (92.31%), Query Frame = 1 
Query:    1 RCELQVILLGDGTVGKTSIATRFAQDDFSQAYKQTIGLDFFVKRIVLPGDVHVAMQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVDACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHDESVNGGEVPEYTS 624
            R + +VILLGDGTVGKTSIATRFAQ DFSQ YKQTIGLDFFVKRI+LPGDV V MQIWDIGGQSIGSKMMSKYI GAHAV+MCYDITNYDSFQ+LDDWYR+VVK F  G MPYVAMVGNKCDLSHMRAVRT+SAHQFADDN MYTFFMSAKSGDQVDACFHRIAGHLSGIA +R QLDAAG V++A+IVN+RRHDE V+GGE+P+YTS
Sbjct:   26 RLQYKVILLGDGTVGKTSIATRFAQGDFSQMYKQTIGLDFFVKRILLPGDVQVTMQIWDIGGQSIGSKMMSKYIFGAHAVIMCYDITNYDSFQDLDDWYRLVVKTFEKGVMPYVAMVGNKCDLSHMRAVRTTSAHQFADDNNMYTFFMSAKSGDQVDACFHRIAGHLSGIALSRPQLDAAGGVLSASIVNYRRHDEEVHGGELPDYTS 233
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BLAST of mRNA_F-serratus_M_contig121.1649.1 vs. uniprot
Match: A0A6H5JPJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ9_9PHAE)

HSP 1 Score: 357 bits (915), Expect = 7.010e-122
Identity = 174/213 (81.69%), Postives = 190/213 (89.20%), Query Frame = 1 
Query:   13 QVILLGDGTVGKTSIATRFAQDDFSQAYKQTIGLDFFVKRIVLPGDVHVAMQIWDIGGQSIGSKMMSKYICGAH---------AVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVDACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHDESVNGGEVPEYTS 624
            +VILLGDGTVGKTSIATRFAQ DFSQ YKQTIGLDFFVKRI+LPGDV V MQ+WDIGGQSIGSKMMSKYI GAH         AV+MCYDITNYDSFQNLDDWYR+VVK F  G MPYVAMVGNKCDLSHMRAVRT+SAH+FADDN MYTFFMSAKSGDQVDACFHRIAGHLSG+A +R QLDAAG V++A+IVN+RRHDE V+GGE+P+YTS
Sbjct:  101 KVILLGDGTVGKTSIATRFAQGDFSQMYKQTIGLDFFVKRILLPGDVQVTMQVWDIGGQSIGSKMMSKYIFGAHVRSGGTGLIAVIMCYDITNYDSFQNLDDWYRLVVKTFEKGVMPYVAMVGNKCDLSHMRAVRTTSAHRFADDNNMYTFFMSAKSGDQVDACFHRIAGHLSGVALSRPQLDAAGGVLSASIVNYRRHDEEVHGGELPDYTS 313
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BLAST of mRNA_F-serratus_M_contig121.1649.1 vs. uniprot
Match: A0A835YXE0_9STRA (Rab28, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXE0_9STRA)

HSP 1 Score: 272 bits (696), Expect = 6.620e-90
Identity = 129/208 (62.02%), Postives = 169/208 (81.25%), Query Frame = 1 
Query:    7 ELQVILLGDGTVGKTSIATRFAQDDFSQAYKQTIGLDFFVKRIVLPGDVHVAMQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVDACFHRIAGHLSGIAFTRS---QLDAAGRVVTANIVNHRRHDESVNGGEVPEYT 621
            + ++ILLGDG VGKTSIA RFA++ FSQ+YKQTIGLDFF+KRIVLPGD+ VA+Q+WDIGGQSIGSKM+  YI G+HAV+ CYD+TN DSF +L+DW  +V+K+ A+ + P +A+ GNKCDLSH+RAVR+ + + FAD + M  +FMSAKSGDQV+ACFHR+A  L+ ++ +++   +LD A  VVTA IVNH RHD +VN GEVPE+T
Sbjct:   17 QFKIILLGDGAVGKTSIANRFAKESFSQSYKQTIGLDFFIKRIVLPGDISVALQLWDIGGQSIGSKMLGNYIHGSHAVIFCYDVTNADSFLDLEDWRSLVMKS-AADDKPVMALAGNKCDLSHIRAVRSEAINTFADKHDMQVYFMSAKSGDQVNACFHRLAAQLAEVSLSKADLQRLDGAENVVTAEIVNHPRHDPNVNKGEVPEFT 223
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BLAST of mRNA_F-serratus_M_contig121.1649.1 vs. uniprot
Match: A0A7S0HTS2_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HTS2_9EUKA)

HSP 1 Score: 267 bits (682), Expect = 9.830e-88
Identity = 119/194 (61.34%), Postives = 156/194 (80.41%), Query Frame = 1 
Query:    7 ELQVILLGDGTVGKTSIATRFAQDDFSQAYKQTIGLDFFVKRIVLPGDVHVAMQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVDACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHDE 588
            + +VILLGDG VGKTSIA RF +D F++AYKQTIG+DFF+KR+VLPG+VHVA+QIWDIGGQ+IG KM+  YI GA AV++CYDITNY SFQNL+DW+R+V + F    MPYV +VGNK DL+HMRAV+     QFAD+N MY+F +SAK+GD V +CF+R+A  L+G+  T+ +L+ A ++V A IVNH +HD+
Sbjct:   24 QYKVILLGDGAVGKTSIAMRFTEDHFAKAYKQTIGVDFFIKRLVLPGEVHVALQIWDIGGQTIGGKMIGNYIYGAQAVLLCYDITNYQSFQNLEDWFRLVRRTFQGSAMPYVTLVGNKTDLNHMRAVKAEKHSQFADENDMYSFLLSAKTGDNVSSCFYRLAADLAGVVLTKPELEIASKIVRAEIVNHPQHDQ 217
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BLAST of mRNA_F-serratus_M_contig121.1649.1 vs. uniprot
Match: A0A7S0P625_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P625_9EUKA)

HSP 1 Score: 263 bits (672), Expect = 5.530e-86
Identity = 117/193 (60.62%), Postives = 157/193 (81.35%), Query Frame = 1 
Query:    7 ELQVILLGDGTVGKTSIATRFAQDDFSQAYKQTIGLDFFVKRIVLPGDVHVAMQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVDACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHD 585
            + +VILLGDG VGKTSIA RF +D F++ YKQTIGLDFF+KR+VLPGDV+VA+QIWDIGGQ+IG KM+S YI GA AV++CYDITNY++FQNL+DW+R+V + F+ GNMPYV + GNK DL+HMRAV+    +QFA++N M T FMSAK+GD V +CF+++A  L+G+  ++ +L+ A ++V A IVNH + D
Sbjct:   35 QYKVILLGDGAVGKTSIAMRFTEDHFAKTYKQTIGLDFFIKRLVLPGDVNVALQIWDIGGQTIGGKMISNYIYGAQAVLLCYDITNYETFQNLEDWFRLVRRTFSQGNMPYVVLAGNKTDLNHMRAVKLEKHNQFAEENEMITAFMSAKTGDAVSSCFYKVAADLAGVVLSKPELEVASKIVKAEIVNHPQED 227
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BLAST of mRNA_F-serratus_M_contig121.1649.1 vs. uniprot
Match: A0A7S1CBI3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBI3_9STRA)

HSP 1 Score: 263 bits (671), Expect = 6.020e-86
Identity = 120/196 (61.22%), Postives = 157/196 (80.10%), Query Frame = 1 
Query:    7 ELQVILLGDGTVGKTSIATRFAQDDFSQAYKQTIGLDFFVKRIVLPGDVHVAMQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVDACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHDESV 594
            + +VILLGDG VGKTSIA RF  D FS+ YKQTIGLDFF+KR+VLPGD+HVA+QIWDIGGQSIG KM+  YI GA AV++CYD+TNY SFQNL+DWYR+V +  A+  MPYVA+VGNK DL+HMRAV+    + F+D+N MY++FMSAK+GD V + F+RIA  L+G+  T+ +++   +VV A +VNH+R+D +V
Sbjct:   23 QYKVILLGDGAVGKTSIAARFTNDYFSKMYKQTIGLDFFIKRLVLPGDIHVALQIWDIGGQSIGGKMIKNYIYGAQAVLLCYDVTNYASFQNLEDWYRLVQQTHAADAMPYVALVGNKTDLNHMRAVKLDKHNLFSDENDMYSYFMSAKTGDSVASSFYRIAADLAGVVLTKPEIEVESKVVKAELVNHQRNDPAV 218
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BLAST of mRNA_F-serratus_M_contig121.1649.1 vs. uniprot
Match: A0A813DPM1_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DPM1_POLGL)

HSP 1 Score: 257 bits (656), Expect = 8.780e-84
Identity = 118/193 (61.14%), Postives = 153/193 (79.27%), Query Frame = 1 
Query:    7 ELQVILLGDGTVGKTSIATRFAQDDFSQAYKQTIGLDFFVKRIVLPGDVHVAMQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVDACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHD 585
            + +VILLGDG VGKTS+ATRF +D F++ YKQTIGLDFFVKR+VLPGDVHV +QIWDIGGQSIG KM+S YI G++AVV+CYDITNY+SFQ+L+DW  +V + F    +PYVA++GNK DL+HMRAV+     QFAD+N +YT+F+SA++GDQV   F RIA  L+G+  T+ +L+ A +   A +VNH RHD
Sbjct:   23 QYKVILLGDGAVGKTSLATRFCEDHFAKQYKQTIGLDFFVKRVVLPGDVHVCLQIWDIGGQSIGGKMVSNYIHGSNAVVLCYDITNYESFQHLEDWLFLVKRTFGESPLPYVALMGNKHDLAHMRAVKVDKHTQFADENDLYTYFVSARTGDQVHPSFFRIAADLAGVTLTKPELEVAQKPTKAELVNHPRHD 215
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BLAST of mRNA_F-serratus_M_contig121.1649.1 vs. uniprot
Match: A0A7S3M8N4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8N4_9STRA)

HSP 1 Score: 256 bits (654), Expect = 2.710e-83
Identity = 119/205 (58.05%), Postives = 159/205 (77.56%), Query Frame = 1 
Query:    7 ELQVILLGDGTVGKTSIATRFAQDDFSQAYKQTIGLDFFVKRIVLPGDVHVAMQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVDACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHDESVNGGEVPEYT 621
            + ++ILLGDG VGKTSIATRF+++ FSQ YKQT+G+DFF+KRI LP +  +A QIWDIGGQSIGSKM++ YI GA AV++CYDITNY+SF NL+DWYRIV++ F    MPYVA++GNK DL H+ AVR    ++FA++N + +F MSAK+GDQV   F +IA  L+ + + + +  +   VV A I++H+RHDESVN G+VPEYT
Sbjct:   34 QFKIILLGDGAVGKTSIATRFSEEKFSQNYKQTVGVDFFMKRIHLPPNHQIACQIWDIGGQSIGSKMITNYIAGADAVLLCYDITNYESFANLEDWYRIVLRTFYQAKMPYVALLGNKNDLKHLTAVRAVQHNKFAEENGLASFMMSAKNGDQVTQAFWKIASTLANVPYQKFEQQSQAIVVPATIIDHKRHDESVNRGKVPEYT 238
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BLAST of mRNA_F-serratus_M_contig121.1649.1 vs. uniprot
Match: A0A7S2XY86_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY86_9STRA)

HSP 1 Score: 253 bits (646), Expect = 7.640e-83
Identity = 117/172 (68.02%), Postives = 143/172 (83.14%), Query Frame = 1 
Query:    7 ELQVILLGDGTVGKTSIATRFAQDDFSQAYKQTIGLDFFVKRIVLPGDVHVAMQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVDACFHRIAGHLSGIAFTR 522
            + +VI+LGDG VGKTSIA RF  + FS+AYKQTIGLDFF+K+++LPGDVHVA+QIWDIGGQS+GSKM+  YI GAHAV++CYDITNYDSFQNL+DWYR+V + FA   MPYV +V NK DL+HMRAVR    +QFAD+N +Y F MSAKSGDQV+ACF+RIA  L+G   T+
Sbjct:   24 QFKVIILGDGAVGKTSIAMRFTDNSFSKAYKQTIGLDFFIKKLILPGDVHVALQIWDIGGQSMGSKMIHNYIFGAHAVLLCYDITNYDSFQNLEDWYRLVRRTFARDTMPYVGLVANKSDLNHMRAVRQDVHNQFADENELYGFVMSAKSGDQVNACFYRIAAALAGGGVTK 195
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BLAST of mRNA_F-serratus_M_contig121.1649.1 vs. uniprot
Match: A0A7S0LHF5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LHF5_9EUKA)

HSP 1 Score: 254 bits (648), Expect = 2.210e-82
Identity = 114/193 (59.07%), Postives = 151/193 (78.24%), Query Frame = 1 
Query:    7 ELQVILLGDGTVGKTSIATRFAQDDFSQAYKQTIGLDFFVKRIVLPGDVHVAMQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVDACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHD 585
            + +VILLGDG VGKTS+A RF +D F++ YKQTIGLDFF+KR++LPG V++A+QIWDIGGQ+IG KM+  YI GA AV++CYDITNY +FQNL+DWYR+V + F  G MP+V ++GNK DL+HMRAV+     QFA++N M T FMSAK+GD V +CF++IA  LSGI  ++  L+ A ++V A IVNH + D
Sbjct:   35 QYKVILLGDGAVGKTSVAMRFTEDHFAKTYKQTIGLDFFIKRLILPGGVNIALQIWDIGGQTIGGKMIQNYIYGAQAVLLCYDITNYQTFQNLEDWYRLVRRTFTQGTMPHVVLIGNKTDLNHMRAVKLEKHTQFAEENDMSTAFMSAKTGDAVTSCFYKIAAELSGIVLSKPDLEVASKIVKAEIVNHPQDD 227
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig121.1649.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE19_ECTSI3.380e-12785.10Rab28, Ras superfamily GTPase n=1 Tax=Ectocarpus s... [more]
A0A6H5JPJ9_9PHAE7.010e-12281.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YXE0_9STRA6.620e-9062.02Rab28, ras superfamily GTPase n=1 Tax=Tribonema mi... [more]
A0A7S0HTS2_9EUKA9.830e-8861.34Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S0P625_9EUKA5.530e-8660.62Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S1CBI3_9STRA6.020e-8661.22Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A813DPM1_POLGL8.780e-8461.14Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A7S3M8N4_9STRA2.710e-8358.05Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2XY86_9STRA7.640e-8368.02Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S0LHF5_9EUKA2.210e-8259.07Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig121contigF-serratus_M_contig121:553814..555729 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score370.9
Seed ortholog evalue3.8e-100
Seed eggNOG ortholog2880.D8LE19
Preferred nameRAB40C
KEGG koko:K07901,ko:K07915,ko:K07928,ko:K17199
KEGG Pathwayko04144,ko04152,ko04530,ko04972,map04144,map04152,map04530,map04972
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000131,GO:0000166,GO:0000910,GO:0001411,GO:0001882,GO:0001883,GO:0002790,GO:0003006,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005768,GO:0005783,GO:0005886,GO:0005933,GO:0005934,GO:0005935,GO:0005937,GO:0006810,GO:0006887,GO:0006892,GO:0006893,GO:0006903,GO:0006904,GO:0006906,GO:0006914,GO:0006996,GO:0007049,GO:0007107,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009306,GO:0009653,GO:0009987,GO:0010927,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0017157,GO:0019001,GO:0019867,GO:0019953,GO:0022402,GO:0022406,GO:0022413,GO:0022414,GO:0022607,GO:0030133,GO:0030154,GO:0030427,GO:0030435,GO:0030437,GO:0031090,GO:0031321,GO:0031410,GO:0031521,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0031982,GO:0032502,GO:0032505,GO:0032506,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032879,GO:0032940,GO:0032989,GO:0032991,GO:0033036,GO:0034293,GO:0034613,GO:0035639,GO:0035690,GO:0036094,GO:0042221,GO:0042493,GO:0042886,GO:0042995,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043332,GO:0043934,GO:0043935,GO:0044085,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044703,GO:0045184,GO:0046903,GO:0048193,GO:0048278,GO:0048284,GO:0048468,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051046,GO:0051049,GO:0051179,GO:0051234,GO:0051286,GO:0051301,GO:0051321,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051704,GO:0051716,GO:0060627,GO:0061024,GO:0061025,GO:0061919,GO:0065007,GO:0070727,GO:0070887,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0072659,GO:0090174,GO:0097159,GO:0097367,GO:0097708,GO:0098588,GO:0098805,GO:0098876,GO:0120025,GO:0120038,GO:0140029,GO:0140056,GO:1901265,GO:1901363,GO:1903046,GO:1903530,GO:1990778
EggNOG free text desc.GTPase activity
EggNOG OGsKOG0078@1,KOG0078@2759
Ec32 ortholog descriptionRab28, Ras superfamily GTPase
Ec32 orthologEc-05_004380.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko04031,ko04121,ko04131,ko04147
Exons5
Model size624
Cds size624
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig121.1649.1prot_F-serratus_M_contig121.1649.1Fucus serratus malepolypeptideF-serratus_M_contig121 553814..555729 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929126.8882627-CDS-F-serratus_M_contig121:553813..5539581622929126.8882627-CDS-F-serratus_M_contig121:553813..553958Fucus serratus maleCDSF-serratus_M_contig121 553814..553958 +
1690962716.2336762-CDS-F-serratus_M_contig121:553813..5539581690962716.2336762-CDS-F-serratus_M_contig121:553813..553958Fucus serratus maleCDSF-serratus_M_contig121 553814..553958 +
1622929126.9032493-CDS-F-serratus_M_contig121:554429..5545181622929126.9032493-CDS-F-serratus_M_contig121:554429..554518Fucus serratus maleCDSF-serratus_M_contig121 554430..554518 +
1690962716.2507052-CDS-F-serratus_M_contig121:554429..5545181690962716.2507052-CDS-F-serratus_M_contig121:554429..554518Fucus serratus maleCDSF-serratus_M_contig121 554430..554518 +
1622929126.914158-CDS-F-serratus_M_contig121:554808..5549351622929126.914158-CDS-F-serratus_M_contig121:554808..554935Fucus serratus maleCDSF-serratus_M_contig121 554809..554935 +
1690962716.2688665-CDS-F-serratus_M_contig121:554808..5549351690962716.2688665-CDS-F-serratus_M_contig121:554808..554935Fucus serratus maleCDSF-serratus_M_contig121 554809..554935 +
1622929126.9285479-CDS-F-serratus_M_contig121:555167..5552711622929126.9285479-CDS-F-serratus_M_contig121:555167..555271Fucus serratus maleCDSF-serratus_M_contig121 555168..555271 +
1690962716.277093-CDS-F-serratus_M_contig121:555167..5552711690962716.277093-CDS-F-serratus_M_contig121:555167..555271Fucus serratus maleCDSF-serratus_M_contig121 555168..555271 +
1622929126.943216-CDS-F-serratus_M_contig121:555570..5557291622929126.943216-CDS-F-serratus_M_contig121:555570..555729Fucus serratus maleCDSF-serratus_M_contig121 555571..555729 +
1690962716.2850475-CDS-F-serratus_M_contig121:555570..5557291690962716.2850475-CDS-F-serratus_M_contig121:555570..555729Fucus serratus maleCDSF-serratus_M_contig121 555571..555729 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig121.1649.1

>prot_F-serratus_M_contig121.1649.1 ID=prot_F-serratus_M_contig121.1649.1|Name=mRNA_F-serratus_M_contig121.1649.1|organism=Fucus serratus male|type=polypeptide|length=208bp
RCELQVILLGDGTVGKTSIATRFAQDDFSQAYKQTIGLDFFVKRIVLPGD
VHVAMQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYR
IVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSA
KSGDQVDACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHDESVNG
GEVPEYTS
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mRNA from alignment at F-serratus_M_contig121:553814..555729+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig121.1649.1 ID=mRNA_F-serratus_M_contig121.1649.1|Name=mRNA_F-serratus_M_contig121.1649.1|organism=Fucus serratus male|type=mRNA|length=1916bp|location=Sequence derived from alignment at F-serratus_M_contig121:553814..555729+ (Fucus serratus male)
CGATGTGAATTACAGGTAATCTTGTTGGGTGATGGGACCGTGGGAAAAAC
TTCGATCGCGACGAGGTTCGCCCAGGACGACTTCTCACAGGCTTACAAGC
AAACGATCGGGCTAGACTTTTTCGTGAAGCGCATTGTTTTGCCAGGTACT
TCGAACGACGCGGTAGATGTGCGCGCCTCGCGATCTGATCGTCGTATTAT
GGCGCGCTGAAAGGGTTTGTCACCAAAGATGTAGGCTTTAGAGTAACCGT
GCCTCAAGCTATTAATAGTCAGCACGTCGATTCGACAGCATAAAGTCGTG
GGGAATCCTCGATGGCTCTTGCGCCTCCCGCAACGACGACGGATTCGAAC
AGACATCTTACTTGCGACTTCGAACAAATGCCGTAGAACAACGCGATATA
TCCCCAGCGCGCGCCGCGTTCCTTCACACGATCATGGCGGGGCGCCAAAA
CTCGGTAGCCTTATTCGTCCGTTGCGGCCGTCTGCACCTTGGTAAAGGCC
ACACGAAATATGCCCGTTGAAGCGACGATCGCTTGCTTCATTCCCACGCC
CTGGAGGTATCGTAAGAGCTTTTGACCAGACGGCGGCATTTGTTCCACCT
GCTTGCGCTTGAAAAGGAGATGTACACGTCGCCATGCAAATATGGGACAT
TGGAGGTCAGAGTATCGGGAGCAAGATGATGTCGAAGTACATATGCGGCG
CCCATGTAAGCATCTAAATCGAGATTATCGTGCGTATGCGCGCACGTCGA
TAGAAAGCCCGTGCAGGACTGTGGTGTCTTTGGGGTGCCCTCTGCGGTTG
CCACCACACGTAATTGCTGTTATTCATAGTTACTGCACACGAGTAGTGAA
CTAGCGCCTAAGAGTGGCCTAATGGCCTGATACGAGGTATGTGCTTCCGA
ACACGTCGACCGGCCTTGTCCGTCGACATACTACGAGACATCGTCTTGAT
ATCTGCGACCAGTGAAGCCCACTCGAGAGATTATCCCACAAACAGGCGGT
TGTGATGTGCTACGATATCACGAACTACGACAGCTTCCAGAACCTGGACG
ATTGGTATCGCATCGTTGTGAAGGCGTTCGCCAGCGGCAACATGCCGTAC
GTGGCAATGGTAGGAAACAAATGTGAGCCTGCGTCCACGGCCCCGCTCGG
TCACCGAGCGCTTGCTTGTGTGCGTGTCGCTGTCGCTGTCGCAGTTATAT
GCCATCGTTTTTCATAGATTTACGGTTGTTCGTGATGATGCCTCGGCGCC
TCCTACGAGCACTCGTTCTTCGCGAAGCATTTTCTCCCGAGTTTGGCGTG
CAATCTGGCGTCATTGCCACGGCTCCATCTGTATCTGTCCCGACACTTTC
CCAGGCGATTTGAGCCACATGCGAGCGGTCCGCACGTCAAGCGCTCATCA
GTTCGCCGATGACAATGCCATGTACACCTTCTTCATGTCGGCCAAGTCAG
GGGATCAGGTGTGTTCTCCCTTCCTTAAATCCCTTCTCAACTCTCTGCCA
AGCCCTCGTAAAGCTTGTACGCTGTCGTATCGTGTACGCATTTTCCCTTT
GTGCTTAACTAAACTTAATTTTATACAGCGTTATTCCCGGGTTAACGGCG
GTGCGATCCTCATCGCACCCTGCTTCGTCTTTCGCGCTGTTGATTGCTAT
GGTGTCGCTCGGCGGGTGCTGCTGAGAGAGTCGGGAAAACAATGTCACAA
AGCTTGAAGGACATCCACAAACGCGACTATTTAGCGCTGCGCCGTCGTCC
ACGACAGGTGGATGCTTGCTTTCACAGAATAGCGGGACACTTATCTGGCA
TTGCATTCACCCGGTCGCAGCTAGACGCCGCGGGACGGGTGGTGACCGCG
AACATCGTTAACCATCGGCGACACGACGAAAGCGTTAATGGCGGAGAGGT
GCCGGAGTATACATCT
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Coding sequence (CDS) from alignment at F-serratus_M_contig121:553814..555729+

>mRNA_F-serratus_M_contig121.1649.1 ID=mRNA_F-serratus_M_contig121.1649.1|Name=mRNA_F-serratus_M_contig121.1649.1|organism=Fucus serratus male|type=CDS|length=1248bp|location=Sequence derived from alignment at F-serratus_M_contig121:553814..555729+ (Fucus serratus male)
CGATGTGAATTACAGGTAATCTTGTTGGGTGATGGGACCGTGGGAAAAAC
TTCGATCGCGACGAGGTTCGCCCAGGACGACTTCTCACAGGCTTACAAGC
AAACGATCGGGCTAGACTTTTTCGTGAAGCGCATTGTTTTGCCAGCGATG
TGAATTACAGGTAATCTTGTTGGGTGATGGGACCGTGGGAAAAACTTCGA
TCGCGACGAGGTTCGCCCAGGACGACTTCTCACAGGCTTACAAGCAAACG
ATCGGGCTAGACTTTTTCGTGAAGCGCATTGTTTTGCCAGGAGATGTACA
CGTCGCCATGCAAATATGGGACATTGGAGGTCAGAGTATCGGGAGCAAGA
TGATGTCGAAGTACATATGCGGCGCCCATGAGATGTACACGTCGCCATGC
AAATATGGGACATTGGAGGTCAGAGTATCGGGAGCAAGATGATGTCGAAG
TACATATGCGGCGCCCATGCGGTTGTGATGTGCTACGATATCACGAACTA
CGACAGCTTCCAGAACCTGGACGATTGGTATCGCATCGTTGTGAAGGCGT
TCGCCAGCGGCAACATGCCGTACGTGGCAATGGTAGGAAACAAATGCGGT
TGTGATGTGCTACGATATCACGAACTACGACAGCTTCCAGAACCTGGACG
ATTGGTATCGCATCGTTGTGAAGGCGTTCGCCAGCGGCAACATGCCGTAC
GTGGCAATGGTAGGAAACAAATGCGATTTGAGCCACATGCGAGCGGTCCG
CACGTCAAGCGCTCATCAGTTCGCCGATGACAATGCCATGTACACCTTCT
TCATGTCGGCCAAGTCAGGGGATCAGGCGATTTGAGCCACATGCGAGCGG
TCCGCACGTCAAGCGCTCATCAGTTCGCCGATGACAATGCCATGTACACC
TTCTTCATGTCGGCCAAGTCAGGGGATCAGGTGGATGCTTGCTTTCACAG
AATAGCGGGACACTTATCTGGCATTGCATTCACCCGGTCGCAGCTAGACG
CCGCGGGACGGGTGGTGACCGCGAACATCGTTAACCATCGGCGACACGAC
GAAAGCGTTAATGGCGGAGAGGTGCCGGAGTATACATCTGTGGATGCTTG
CTTTCACAGAATAGCGGGACACTTATCTGGCATTGCATTCACCCGGTCGC
AGCTAGACGCCGCGGGACGGGTGGTGACCGCGAACATCGTTAACCATCGG
CGACACGACGAAAGCGTTAATGGCGGAGAGGTGCCGGAGTATACATCT
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