prot_F-serratus_M_contig121.1649.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig121.1649.1
Unique Nameprot_F-serratus_M_contig121.1649.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length208
Homology
BLAST of mRNA_F-serratus_M_contig121.1649.1 vs. uniprot
Match: D8LE19_ECTSI (Rab28, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE19_ECTSI)

HSP 1 Score: 367 bits (942), Expect = 3.380e-127
Identity = 177/208 (85.10%), Postives = 192/208 (92.31%), Query Frame = 0
Query:    1 RCELQVILLGDGTVGKTSIATRFAQDDFSQAYKQTIGLDFFVKRIVLPGDVHVAMQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVDACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHDESVNGGEVPEYTS 208
            R + +VILLGDGTVGKTSIATRFAQ DFSQ YKQTIGLDFFVKRI+LPGDV V MQIWDIGGQSIGSKMMSKYI GAHAV+MCYDITNYDSFQ+LDDWYR+VVK F  G MPYVAMVGNKCDLSHMRAVRT+SAHQFADDN MYTFFMSAKSGDQVDACFHRIAGHLSGIA +R QLDAAG V++A+IVN+RRHDE V+GGE+P+YTS
Sbjct:   26 RLQYKVILLGDGTVGKTSIATRFAQGDFSQMYKQTIGLDFFVKRILLPGDVQVTMQIWDIGGQSIGSKMMSKYIFGAHAVIMCYDITNYDSFQDLDDWYRLVVKTFEKGVMPYVAMVGNKCDLSHMRAVRTTSAHQFADDNNMYTFFMSAKSGDQVDACFHRIAGHLSGIALSRPQLDAAGGVLSASIVNYRRHDEEVHGGELPDYTS 233          
BLAST of mRNA_F-serratus_M_contig121.1649.1 vs. uniprot
Match: A0A6H5JPJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ9_9PHAE)

HSP 1 Score: 357 bits (915), Expect = 7.010e-122
Identity = 174/213 (81.69%), Postives = 190/213 (89.20%), Query Frame = 0
Query:    5 QVILLGDGTVGKTSIATRFAQDDFSQAYKQTIGLDFFVKRIVLPGDVHVAMQIWDIGGQSIGSKMMSKYICGAH---------AVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVDACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHDESVNGGEVPEYTS 208
            +VILLGDGTVGKTSIATRFAQ DFSQ YKQTIGLDFFVKRI+LPGDV V MQ+WDIGGQSIGSKMMSKYI GAH         AV+MCYDITNYDSFQNLDDWYR+VVK F  G MPYVAMVGNKCDLSHMRAVRT+SAH+FADDN MYTFFMSAKSGDQVDACFHRIAGHLSG+A +R QLDAAG V++A+IVN+RRHDE V+GGE+P+YTS
Sbjct:  101 KVILLGDGTVGKTSIATRFAQGDFSQMYKQTIGLDFFVKRILLPGDVQVTMQVWDIGGQSIGSKMMSKYIFGAHVRSGGTGLIAVIMCYDITNYDSFQNLDDWYRLVVKTFEKGVMPYVAMVGNKCDLSHMRAVRTTSAHRFADDNNMYTFFMSAKSGDQVDACFHRIAGHLSGVALSRPQLDAAGGVLSASIVNYRRHDEEVHGGELPDYTS 313          
BLAST of mRNA_F-serratus_M_contig121.1649.1 vs. uniprot
Match: A0A835YXE0_9STRA (Rab28, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXE0_9STRA)

HSP 1 Score: 272 bits (696), Expect = 6.620e-90
Identity = 129/208 (62.02%), Postives = 169/208 (81.25%), Query Frame = 0
Query:    3 ELQVILLGDGTVGKTSIATRFAQDDFSQAYKQTIGLDFFVKRIVLPGDVHVAMQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVDACFHRIAGHLSGIAFTRS---QLDAAGRVVTANIVNHRRHDESVNGGEVPEYT 207
            + ++ILLGDG VGKTSIA RFA++ FSQ+YKQTIGLDFF+KRIVLPGD+ VA+Q+WDIGGQSIGSKM+  YI G+HAV+ CYD+TN DSF +L+DW  +V+K+ A+ + P +A+ GNKCDLSH+RAVR+ + + FAD + M  +FMSAKSGDQV+ACFHR+A  L+ ++ +++   +LD A  VVTA IVNH RHD +VN GEVPE+T
Sbjct:   17 QFKIILLGDGAVGKTSIANRFAKESFSQSYKQTIGLDFFIKRIVLPGDISVALQLWDIGGQSIGSKMLGNYIHGSHAVIFCYDVTNADSFLDLEDWRSLVMKS-AADDKPVMALAGNKCDLSHIRAVRSEAINTFADKHDMQVYFMSAKSGDQVNACFHRLAAQLAEVSLSKADLQRLDGAENVVTAEIVNHPRHDPNVNKGEVPEFT 223          
BLAST of mRNA_F-serratus_M_contig121.1649.1 vs. uniprot
Match: A0A7S0HTS2_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HTS2_9EUKA)

HSP 1 Score: 267 bits (682), Expect = 9.830e-88
Identity = 119/194 (61.34%), Postives = 156/194 (80.41%), Query Frame = 0
Query:    3 ELQVILLGDGTVGKTSIATRFAQDDFSQAYKQTIGLDFFVKRIVLPGDVHVAMQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVDACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHDE 196
            + +VILLGDG VGKTSIA RF +D F++AYKQTIG+DFF+KR+VLPG+VHVA+QIWDIGGQ+IG KM+  YI GA AV++CYDITNY SFQNL+DW+R+V + F    MPYV +VGNK DL+HMRAV+     QFAD+N MY+F +SAK+GD V +CF+R+A  L+G+  T+ +L+ A ++V A IVNH +HD+
Sbjct:   24 QYKVILLGDGAVGKTSIAMRFTEDHFAKAYKQTIGVDFFIKRLVLPGEVHVALQIWDIGGQTIGGKMIGNYIYGAQAVLLCYDITNYQSFQNLEDWFRLVRRTFQGSAMPYVTLVGNKTDLNHMRAVKAEKHSQFADENDMYSFLLSAKTGDNVSSCFYRLAADLAGVVLTKPELEIASKIVRAEIVNHPQHDQ 217          
BLAST of mRNA_F-serratus_M_contig121.1649.1 vs. uniprot
Match: A0A7S0P625_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0P625_9EUKA)

HSP 1 Score: 263 bits (672), Expect = 5.530e-86
Identity = 117/193 (60.62%), Postives = 157/193 (81.35%), Query Frame = 0
Query:    3 ELQVILLGDGTVGKTSIATRFAQDDFSQAYKQTIGLDFFVKRIVLPGDVHVAMQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVDACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHD 195
            + +VILLGDG VGKTSIA RF +D F++ YKQTIGLDFF+KR+VLPGDV+VA+QIWDIGGQ+IG KM+S YI GA AV++CYDITNY++FQNL+DW+R+V + F+ GNMPYV + GNK DL+HMRAV+    +QFA++N M T FMSAK+GD V +CF+++A  L+G+  ++ +L+ A ++V A IVNH + D
Sbjct:   35 QYKVILLGDGAVGKTSIAMRFTEDHFAKTYKQTIGLDFFIKRLVLPGDVNVALQIWDIGGQTIGGKMISNYIYGAQAVLLCYDITNYETFQNLEDWFRLVRRTFSQGNMPYVVLAGNKTDLNHMRAVKLEKHNQFAEENEMITAFMSAKTGDAVSSCFYKVAADLAGVVLSKPELEVASKIVKAEIVNHPQED 227          
BLAST of mRNA_F-serratus_M_contig121.1649.1 vs. uniprot
Match: A0A7S1CBI3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBI3_9STRA)

HSP 1 Score: 263 bits (671), Expect = 6.020e-86
Identity = 120/196 (61.22%), Postives = 157/196 (80.10%), Query Frame = 0
Query:    3 ELQVILLGDGTVGKTSIATRFAQDDFSQAYKQTIGLDFFVKRIVLPGDVHVAMQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVDACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHDESV 198
            + +VILLGDG VGKTSIA RF  D FS+ YKQTIGLDFF+KR+VLPGD+HVA+QIWDIGGQSIG KM+  YI GA AV++CYD+TNY SFQNL+DWYR+V +  A+  MPYVA+VGNK DL+HMRAV+    + F+D+N MY++FMSAK+GD V + F+RIA  L+G+  T+ +++   +VV A +VNH+R+D +V
Sbjct:   23 QYKVILLGDGAVGKTSIAARFTNDYFSKMYKQTIGLDFFIKRLVLPGDIHVALQIWDIGGQSIGGKMIKNYIYGAQAVLLCYDVTNYASFQNLEDWYRLVQQTHAADAMPYVALVGNKTDLNHMRAVKLDKHNLFSDENDMYSYFMSAKTGDSVASSFYRIAADLAGVVLTKPEIEVESKVVKAELVNHQRNDPAV 218          
BLAST of mRNA_F-serratus_M_contig121.1649.1 vs. uniprot
Match: A0A813DPM1_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813DPM1_POLGL)

HSP 1 Score: 257 bits (656), Expect = 8.780e-84
Identity = 118/193 (61.14%), Postives = 153/193 (79.27%), Query Frame = 0
Query:    3 ELQVILLGDGTVGKTSIATRFAQDDFSQAYKQTIGLDFFVKRIVLPGDVHVAMQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVDACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHD 195
            + +VILLGDG VGKTS+ATRF +D F++ YKQTIGLDFFVKR+VLPGDVHV +QIWDIGGQSIG KM+S YI G++AVV+CYDITNY+SFQ+L+DW  +V + F    +PYVA++GNK DL+HMRAV+     QFAD+N +YT+F+SA++GDQV   F RIA  L+G+  T+ +L+ A +   A +VNH RHD
Sbjct:   23 QYKVILLGDGAVGKTSLATRFCEDHFAKQYKQTIGLDFFVKRVVLPGDVHVCLQIWDIGGQSIGGKMVSNYIHGSNAVVLCYDITNYESFQHLEDWLFLVKRTFGESPLPYVALMGNKHDLAHMRAVKVDKHTQFADENDLYTYFVSARTGDQVHPSFFRIAADLAGVTLTKPELEVAQKPTKAELVNHPRHD 215          
BLAST of mRNA_F-serratus_M_contig121.1649.1 vs. uniprot
Match: A0A7S3M8N4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8N4_9STRA)

HSP 1 Score: 256 bits (654), Expect = 2.710e-83
Identity = 119/205 (58.05%), Postives = 159/205 (77.56%), Query Frame = 0
Query:    3 ELQVILLGDGTVGKTSIATRFAQDDFSQAYKQTIGLDFFVKRIVLPGDVHVAMQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVDACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHDESVNGGEVPEYT 207
            + ++ILLGDG VGKTSIATRF+++ FSQ YKQT+G+DFF+KRI LP +  +A QIWDIGGQSIGSKM++ YI GA AV++CYDITNY+SF NL+DWYRIV++ F    MPYVA++GNK DL H+ AVR    ++FA++N + +F MSAK+GDQV   F +IA  L+ + + + +  +   VV A I++H+RHDESVN G+VPEYT
Sbjct:   34 QFKIILLGDGAVGKTSIATRFSEEKFSQNYKQTVGVDFFMKRIHLPPNHQIACQIWDIGGQSIGSKMITNYIAGADAVLLCYDITNYESFANLEDWYRIVLRTFYQAKMPYVALLGNKNDLKHLTAVRAVQHNKFAEENGLASFMMSAKNGDQVTQAFWKIASTLANVPYQKFEQQSQAIVVPATIIDHKRHDESVNRGKVPEYT 238          
BLAST of mRNA_F-serratus_M_contig121.1649.1 vs. uniprot
Match: A0A7S2XY86_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY86_9STRA)

HSP 1 Score: 253 bits (646), Expect = 7.640e-83
Identity = 117/172 (68.02%), Postives = 143/172 (83.14%), Query Frame = 0
Query:    3 ELQVILLGDGTVGKTSIATRFAQDDFSQAYKQTIGLDFFVKRIVLPGDVHVAMQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVDACFHRIAGHLSGIAFTR 174
            + +VI+LGDG VGKTSIA RF  + FS+AYKQTIGLDFF+K+++LPGDVHVA+QIWDIGGQS+GSKM+  YI GAHAV++CYDITNYDSFQNL+DWYR+V + FA   MPYV +V NK DL+HMRAVR    +QFAD+N +Y F MSAKSGDQV+ACF+RIA  L+G   T+
Sbjct:   24 QFKVIILGDGAVGKTSIAMRFTDNSFSKAYKQTIGLDFFIKKLILPGDVHVALQIWDIGGQSMGSKMIHNYIFGAHAVLLCYDITNYDSFQNLEDWYRLVRRTFARDTMPYVGLVANKSDLNHMRAVRQDVHNQFADENELYGFVMSAKSGDQVNACFYRIAAALAGGGVTK 195          
BLAST of mRNA_F-serratus_M_contig121.1649.1 vs. uniprot
Match: A0A7S0LHF5_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LHF5_9EUKA)

HSP 1 Score: 254 bits (648), Expect = 2.210e-82
Identity = 114/193 (59.07%), Postives = 151/193 (78.24%), Query Frame = 0
Query:    3 ELQVILLGDGTVGKTSIATRFAQDDFSQAYKQTIGLDFFVKRIVLPGDVHVAMQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYRIVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSAKSGDQVDACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHD 195
            + +VILLGDG VGKTS+A RF +D F++ YKQTIGLDFF+KR++LPG V++A+QIWDIGGQ+IG KM+  YI GA AV++CYDITNY +FQNL+DWYR+V + F  G MP+V ++GNK DL+HMRAV+     QFA++N M T FMSAK+GD V +CF++IA  LSGI  ++  L+ A ++V A IVNH + D
Sbjct:   35 QYKVILLGDGAVGKTSVAMRFTEDHFAKTYKQTIGLDFFIKRLILPGGVNIALQIWDIGGQTIGGKMIQNYIYGAQAVLLCYDITNYQTFQNLEDWYRLVRRTFTQGTMPHVVLIGNKTDLNHMRAVKLEKHTQFAEENDMSTAFMSAKTGDAVTSCFYKIAAELSGIVLSKPDLEVASKIVKAEIVNHPQDD 227          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig121.1649.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE19_ECTSI3.380e-12785.10Rab28, Ras superfamily GTPase n=1 Tax=Ectocarpus s... [more]
A0A6H5JPJ9_9PHAE7.010e-12281.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YXE0_9STRA6.620e-9062.02Rab28, ras superfamily GTPase n=1 Tax=Tribonema mi... [more]
A0A7S0HTS2_9EUKA9.830e-8861.34Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S0P625_9EUKA5.530e-8660.62Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S1CBI3_9STRA6.020e-8661.22Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A813DPM1_POLGL8.780e-8461.14Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
A0A7S3M8N4_9STRA2.710e-8358.05Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2XY86_9STRA7.640e-8368.02Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S0LHF5_9EUKA2.210e-8259.07Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 110..123
score: 40.85
coord: 46..68
score: 26.65
coord: 145..167
score: 25.6
coord: 4..25
score: 37.24
coord: 27..43
score: 32.14
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 1..170
e-value: 4.3E-11
score: 40.4
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 6..170
e-value: 8.3E-5
score: -55.8
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 9..206
e-value: 0.0019
score: 0.9
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 4..170
e-value: 1.7E-35
score: 133.9
NoneNo IPR availableGENE3D3.40.50.300coord: 2..169
e-value: 1.5E-47
score: 163.3
NoneNo IPR availablePANTHERPTHR24073:SF572RAS-RELATED PROTEIN RAB-28coord: 8..172
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 8..172
NoneNo IPR availablePROSITEPS51419RABcoord: 1..208
score: 20.609
IPR001806Small GTPasePFAMPF00071Rascoord: 6..165
e-value: 1.1E-40
score: 138.8
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 5..160
e-value: 4.9E-20
score: 69.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig121contigF-serratus_M_contig121:553814..555729 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig121.1649.1mRNA_F-serratus_M_contig121.1649.1Fucus serratus malemRNAF-serratus_M_contig121 553814..555729 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig121.1649.1 ID=prot_F-serratus_M_contig121.1649.1|Name=mRNA_F-serratus_M_contig121.1649.1|organism=Fucus serratus male|type=polypeptide|length=208bp
RCELQVILLGDGTVGKTSIATRFAQDDFSQAYKQTIGLDFFVKRIVLPGD
VHVAMQIWDIGGQSIGSKMMSKYICGAHAVVMCYDITNYDSFQNLDDWYR
IVVKAFASGNMPYVAMVGNKCDLSHMRAVRTSSAHQFADDNAMYTFFMSA
KSGDQVDACFHRIAGHLSGIAFTRSQLDAAGRVVTANIVNHRRHDESVNG
GEVPEYTS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase