mRNA_F-serratus_M_contig1207.1632.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1207.1632.1 vs. uniprot
Match: D7FVU9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU9_ECTSI) HSP 1 Score: 144 bits (363), Expect = 1.730e-43 Identity = 59/80 (73.75%), Postives = 68/80 (85.00%), Query Frame = 1
Query: 1 MDATNVKQFKMDAGASGYPGMFWRSKPEMSASTSSSDWPRNGTLLKGWYADEHPGWVKIDHPQGYWLPVMQHGKAVLHEI 240
MDA K FK+DA A G GMFWR+KPEM ++TSSSDWPRNGT+LKGWY EHPGWVKIDHP+GYW+PV QHGKAV+HE+
Sbjct: 1 MDAAAAKSFKLDASAGGCSGMFWRTKPEMGSTTSSSDWPRNGTMLKGWYVTEHPGWVKIDHPEGYWMPVEQHGKAVMHEV 80
BLAST of mRNA_F-serratus_M_contig1207.1632.1 vs. uniprot
Match: A0A835ZIY5_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIY5_9STRA) HSP 1 Score: 122 bits (305), Expect = 1.180e-34 Identity = 50/79 (63.29%), Postives = 60/79 (75.95%), Query Frame = 1
Query: 1 MDATNVKQFKMDAGASGYPGMFWRSKPEMSASTSSSDWPRNGTLLKGWYADEHPGWVKIDHPQGYWLPVMQHGKAVLHE 237
MD K+F +DAG+ G GMFWRS+P M A+ S+SDWPRNG++L GWY EHPGWV+IDHP GYW+PV Q G VLHE
Sbjct: 1 MDPALRKEFVLDAGSKGCTGMFWRSEPRMGATASASDWPRNGSVLHGWYVQEHPGWVRIDHPNGYWMPVEQDGHTVLHE 79
BLAST of mRNA_F-serratus_M_contig1207.1632.1 vs. uniprot
Match: A0A7S0S545_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S545_9CHLO) HSP 1 Score: 116 bits (291), Expect = 5.030e-32 Identity = 47/77 (61.04%), Postives = 59/77 (76.62%), Query Frame = 1
Query: 4 DATNVKQFKMDAGASGYPGMFWRSKPEMSASTSSSDWPRNGTLLKGWYADEHPGWVKIDHPQGYWLPVMQHGKAVLH 234
DA+ F +DA +G GM+WRSKP+M+AS S+ DWPRNG L+GW + HPGWVK+DHPQGYWLP+ QHGK V+H
Sbjct: 43 DASTKINFTLDASQNGCTGMYWRSKPDMNASVSAPDWPRNGAKLQGWKSVAHPGWVKVDHPQGYWLPIEQHGKPVVH 119
BLAST of mRNA_F-serratus_M_contig1207.1632.1 vs. uniprot
Match: A0A8J4FZJ0_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FZJ0_9CHLO) HSP 1 Score: 116 bits (290), Expect = 6.170e-32 Identity = 47/74 (63.51%), Postives = 57/74 (77.03%), Query Frame = 1
Query: 13 NVKQFKMDAGASGYPGMFWRSKPEMSASTSSSDWPRNGTLLKGWYADEHPGWVKIDHPQGYWLPVMQHGKAVLH 234
N +MDA +G GMFWRSKPEM+AS S+ DWPRNGT+ KGW + EHPGWVK+DHP+GYWLP+ Q+G V H
Sbjct: 40 NKVNIRMDASKNGCTGMFWRSKPEMNASVSAPDWPRNGTVFKGWKSLEHPGWVKVDHPKGYWLPIQQYGNDVCH 113
BLAST of mRNA_F-serratus_M_contig1207.1632.1 vs. uniprot
Match: A0A835XUH0_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XUH0_9CHLO) HSP 1 Score: 114 bits (285), Expect = 1.530e-31 Identity = 48/77 (62.34%), Postives = 58/77 (75.32%), Query Frame = 1
Query: 4 DATNVKQFKMDAGASGYPGMFWRSKPEMSASTSSSDWPRNGTLLKGWYADEHPGWVKIDHPQGYWLPVMQHGKAVLH 234
+AT V ++DA A+G GMFWRSKPEM+AS + DWPRNG KGW + EHPGWVK+DHP+ YWLP+ QHGK V H
Sbjct: 9 EATKVT-IRLDASANGCTGMFWRSKPEMNASVQAPDWPRNGATFKGWKSVEHPGWVKVDHPKDYWLPIEQHGKPVCH 84
BLAST of mRNA_F-serratus_M_contig1207.1632.1 vs. uniprot
Match: A0A8J4G156_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4G156_9CHLO) HSP 1 Score: 115 bits (287), Expect = 2.040e-31 Identity = 46/69 (66.67%), Postives = 56/69 (81.16%), Query Frame = 1
Query: 28 KMDAGASGYPGMFWRSKPEMSASTSSSDWPRNGTLLKGWYADEHPGWVKIDHPQGYWLPVMQHGKAVLH 234
+MDA +G GMFWRSKPEM+AS S+ DWPRNGT+ KGW + EHPGWVK+DHP+GYWLP+ Q+G V H
Sbjct: 50 RMDASKNGCTGMFWRSKPEMNASVSAPDWPRNGTVFKGWKSLEHPGWVKVDHPKGYWLPIQQYGNDVCH 118
BLAST of mRNA_F-serratus_M_contig1207.1632.1 vs. uniprot
Match: A0A835TBT2_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835TBT2_CHLIN) HSP 1 Score: 113 bits (283), Expect = 3.270e-31 Identity = 45/75 (60.00%), Postives = 59/75 (78.67%), Query Frame = 1
Query: 10 TNVKQFKMDAGASGYPGMFWRSKPEMSASTSSSDWPRNGTLLKGWYADEHPGWVKIDHPQGYWLPVMQHGKAVLH 234
T +K ++DA A+G GMFWRSKP+M+AS S+ DWPRNG + +GW + EHPGWVK+DH +GYW+P+ QHGK V H
Sbjct: 11 TKIK-IRLDASANGCSGMFWRSKPDMNASVSAPDWPRNGAVFQGWKSQEHPGWVKVDHEKGYWMPIEQHGKPVCH 84
BLAST of mRNA_F-serratus_M_contig1207.1632.1 vs. uniprot
Match: A8J4I5_CHLRE (Predicted protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A8J4I5_CHLRE) HSP 1 Score: 112 bits (280), Expect = 1.880e-30 Identity = 45/75 (60.00%), Postives = 58/75 (77.33%), Query Frame = 1
Query: 10 TNVKQFKMDAGASGYPGMFWRSKPEMSASTSSSDWPRNGTLLKGWYADEHPGWVKIDHPQGYWLPVMQHGKAVLH 234
T +K ++DA A+G GMFWRSKP+M+AS S+ DWPRNG + GW + EHPGWVK+DH +GYW+P+ QHGK V H
Sbjct: 35 TKIK-IRLDASANGCSGMFWRSKPDMNASVSAPDWPRNGAVFLGWKSQEHPGWVKVDHEKGYWMPIEQHGKPVCH 108
BLAST of mRNA_F-serratus_M_contig1207.1632.1 vs. uniprot
Match: A0A150GII6_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GII6_GONPE) HSP 1 Score: 112 bits (280), Expect = 1.880e-30 Identity = 44/69 (63.77%), Postives = 55/69 (79.71%), Query Frame = 1
Query: 28 KMDAGASGYPGMFWRSKPEMSASTSSSDWPRNGTLLKGWYADEHPGWVKIDHPQGYWLPVMQHGKAVLH 234
+MDA +G GMFWRSKP+M+AS ++ DWPRNGT+ KGW + EHPGWVK+DHPQ YWLP+ Q+G V H
Sbjct: 42 RMDASKNGCTGMFWRSKPDMNASVNAPDWPRNGTVFKGWKSVEHPGWVKVDHPQNYWLPIQQYGNDVCH 110
BLAST of mRNA_F-serratus_M_contig1207.1632.1 vs. uniprot
Match: A0A2J8AGK5_9CHLO (Uncharacterized protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8AGK5_9CHLO) HSP 1 Score: 105 bits (262), Expect = 4.900e-28 Identity = 42/69 (60.87%), Postives = 54/69 (78.26%), Query Frame = 1
Query: 28 KMDAGASGYPGMFWRSKPEMSASTSSSDWPRNGTLLKGWYADEHPGWVKIDHPQGYWLPVMQHGKAVLH 234
+MD+ A+G GM+WR+KPEM+AS S+ DWPRNG +GW + EHPGWVKIDH + YWLP+ Q+GK V H
Sbjct: 16 RMDSSANGCTGMYWRTKPEMNASVSAPDWPRNGAKFQGWKSVEHPGWVKIDHEKQYWLPIQQYGKDVCH 84 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1207.1632.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1207.1632.1 >prot_F-serratus_M_contig1207.1632.1 ID=prot_F-serratus_M_contig1207.1632.1|Name=mRNA_F-serratus_M_contig1207.1632.1|organism=Fucus serratus male|type=polypeptide|length=82bp MDATNVKQFKMDAGASGYPGMFWRSKPEMSASTSSSDWPRNGTLLKGWYAback to top mRNA from alignment at F-serratus_M_contig1207:140688..141779- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1207.1632.1 ID=mRNA_F-serratus_M_contig1207.1632.1|Name=mRNA_F-serratus_M_contig1207.1632.1|organism=Fucus serratus male|type=mRNA|length=1092bp|location=Sequence derived from alignment at F-serratus_M_contig1207:140688..141779- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1207:140688..141779- >mRNA_F-serratus_M_contig1207.1632.1 ID=mRNA_F-serratus_M_contig1207.1632.1|Name=mRNA_F-serratus_M_contig1207.1632.1|organism=Fucus serratus male|type=CDS|length=492bp|location=Sequence derived from alignment at F-serratus_M_contig1207:140688..141779- (Fucus serratus male)back to top |