prot_F-serratus_M_contig1004.145.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1004.145.1
Unique Nameprot_F-serratus_M_contig1004.145.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length295
Homology
BLAST of mRNA_F-serratus_M_contig1004.145.1 vs. uniprot
Match: D7FH15_ECTSI (Palmitoyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH15_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 1.040e-64
Identity = 112/194 (57.73%), Postives = 135/194 (69.59%), Query Frame = 0
Query:   71 GSSIVEGLSSRDRHH---RQVARSTKRLLLAKPTPSEPITDPFAFVCDIARRPKFGHQYILCPSRSRRHRGEPIGLSVGPHWSGVLYTISMIAVVTLFLTRVVLN-DVAPWCQPAGVVCALITTALLLATAVTDPGIVVQGAEGGEGEGSEYCEECSIWRPDXXXXXXXXXVCILGLDHHCLWMGKWTGQHTVV 260
            GS  V       + H   R V+R ++ + +A P P EPITDPFAFVC++ARRPKFGHQY+LCP RSRR     +GLSVGPHW+GV+YTISMI V+TLFL RV++  +VAPWCQP  V C+++T   LLATAV DPGIVV+ AE  EG    YCEECSIWRP     XXXXX  I GLDH   WMGK  G+  ++
Sbjct:   43 GSGTVREXXXXXQDHTRDRAVSRPSRGIQVATPAPFEPITDPFAFVCEMARRPKFGHQYVLCPERSRRRGDRRVGLSVGPHWAGVIYTISMIFVITLFLVRVLIGPNVAPWCQPVIVACSMVTVVFLLATAVADPGIVVESAES-EGASCGYCEECSIWRPQGAEHXXXXXXXIFGLDHXXPWMGKCVGRGNIL 235          
BLAST of mRNA_F-serratus_M_contig1004.145.1 vs. uniprot
Match: A0A6V1ME69_HETAK (Palmitoyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1ME69_HETAK)

HSP 1 Score: 94.7 bits (234), Expect = 1.670e-19
Identity = 59/161 (36.65%), Postives = 81/161 (50.31%), Query Frame = 0
Query:  107 TDPFAFVCDIARRPKFGHQYILCPSRSRRHRGEPIGLSVGPHWSGVLYTISMIAVVTLFLTRVVLNDVAPWCQPAGVVCALI----TTALLLATAVTDPGIV----VQGAEGGEGEGSEYCEECSIWRPDXXXXXXXXXVCILGLDHHCLWMGKWTGQHTV 259
            TDPF F+C     P  G+ YIL  +      G+P  ++VGPHWSG ++T  +I   T FL  +V      W +PA +         +TA L   A TDPGIV       A     +G  +C++CSI++P+         VCI G DHHC WMGK  G+  +
Sbjct:   55 TDPFYFICKRFGFPMLGNNYILRTTDD----GDP-RMTVGPHWSGTVFTTVIILSGTYFLAPLV------WGRPAALAATAFFFGCSTASLWLVACTDPGIVRRATAPAAAAAAADGLRFCDKCSIYQPEGAVHCNDCGVCIEGHDHHCPWMGKCLGRGNI 204          
BLAST of mRNA_F-serratus_M_contig1004.145.1 vs. uniprot
Match: A0A835ZD98_9STRA (Palmitoyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD98_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 8.680e-7
Identity = 51/156 (32.69%), Postives = 71/156 (45.51%), Query Frame = 0
Query:  108 DPFAFVCDIARRPKFGHQYILCPSRSRRHRGEPIGLSVGPHWSGVLYTISMIAVVTLFLTRVVLNDVAP----WCQPAGVVCALITTALLLATAVTDPGIVVQGAEGGEGEGSEYCEECSIWRPDXXXXXXXXXVCILGLDHHCLWMGKWTGQHTV 259
            DP   +C   R PK GH Y+L  +     R   + L++GPHW+GVL+     + VTL  T  ++    P    W +   V  A +T   L  T  +DPGIV Q A       +  C EC++  P     XXXXX          +WMGK  G+  +
Sbjct:    1 DPCRCLCSWLRAPKIGHNYVLARTPGSL-RSSKLLLTMGPHWTGVLFA----SAVTLGATVALIIQDGPQGTNWFKWFCVSGAGLTLLTLWLTGCSDPGIVRQPANADMD--ARMCPECAMMVPGTAEHXXXXXXXXXXXXXXXIWMGKCIGKQNM 149          
BLAST of mRNA_F-serratus_M_contig1004.145.1 vs. uniprot
Match: M4BFB6_HYAAE (Palmitoyltransferase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BFB6_HYAAE)

HSP 1 Score: 59.3 bits (142), Expect = 1.110e-6
Identity = 61/202 (30.20%), Postives = 82/202 (40.59%), Query Frame = 0
Query:   96 LLAKPTPSEPITDPFAFVCDIARRPKFGHQYILCPSRSRRHRGEPIGLSVGPHWSGVLYTISMIAVVT-LFLTRVVLNDVAPWCQPAGVVCALITTAL-LLATAVTDPGIVV-------QGAEGGEGEGSE--------------------------------YCEECSIWRPDXXXXXXXXXVCILGLDHHCLWMGKWTGQ 256
            +LA+P  S   +DP A +C   +  + GH YIL   RS     +   L VGPHW GVL T+S++ + T +FL + V     PW      +    TT   L  T+ TDPGIV        +     E E +E                                +C+ CSI +           VCI G DHHC WM K  G+
Sbjct:   17 VLAQPVNS---SDPLACLC-CCKFKRLGHGYILY-ERSDGDGMKTTLLVVGPHWIGVLVTLSIVLLCTGMFLFQCVAT--MPWYNTLMTLGLCGTTLYYLFQTSCTDPGIVQPLQHKKDESLTQDESEATELEAEHVAIKTIAMESSVVRYAHDRRLRPTRRRFCDICSIQQDCSTDHCEDCGVCIAGHDHHCPWMSKCIGR 211          
BLAST of mRNA_F-serratus_M_contig1004.145.1 vs. uniprot
Match: A0A6G0X9B3_9STRA (Palmitoyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X9B3_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 3.110e-5
Identity = 39/121 (32.23%), Postives = 52/121 (42.98%), Query Frame = 0
Query:  107 TDPFAFVCDIARRPKFGHQYILCPSRSRRHRGEPIGLSVGPHWSGVLYTISMIAVVTLFLTRVVLNDVAPWCQPAGVVCALITTALLLATAVTDPGIVVQGA---EGGEGEGSEYCEECSI 224
            TDP    C    R K G  Y+L       H   P  + VGPHW GVL T+++I V T F       ++  W     +     T   L  T  TDPGIV +G+   +      S YC+ C +
Sbjct:   50 TDPCRCFCCFGFR-KIGQNYVL-------HESNPF-IIVGPHWIGVLITLTLIVVSTYFFIDQQCRELEAWYTLLSLALCFATIFFLFKTTCTDPGIVPRGSLHTDPALVSMSSYCDICDV 161          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1004.145.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FH15_ECTSI1.040e-6457.73Palmitoyltransferase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A6V1ME69_HETAK1.670e-1936.65Palmitoyltransferase n=1 Tax=Heterosigma akashiwo ... [more]
A0A835ZD98_9STRA8.680e-732.69Palmitoyltransferase n=1 Tax=Tribonema minus TaxID... [more]
M4BFB6_HYAAE1.110e-630.20Palmitoyltransferase n=1 Tax=Hyaloperonospora arab... [more]
A0A6G0X9B3_9STRA3.110e-532.23Palmitoyltransferase n=1 Tax=Aphanomyces euteiches... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001594Palmitoyltransferase, DHHC domainPFAMPF01529DHHCcoord: 215..257
e-value: 1.7E-13
score: 50.8
NoneNo IPR availablePANTHERPTHR22883ZINC FINGER DHHC DOMAIN CONTAINING PROTEINcoord: 139..260
NoneNo IPR availablePANTHERPTHR22883:SF239coord: 139..260
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 199..294
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 151..171
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 172..176
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 177..198
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..150
NoneNo IPR availablePROSITEPS50216DHHCcoord: 217..255
score: 17.789

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1004contigF-serratus_M_contig1004:220145..222593 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1004.145.1mRNA_F-serratus_M_contig1004.145.1Fucus serratus malemRNAF-serratus_M_contig1004 219688..230683 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1004.145.1 ID=prot_F-serratus_M_contig1004.145.1|Name=mRNA_F-serratus_M_contig1004.145.1|organism=Fucus serratus male|type=polypeptide|length=295bp
MSPPHDKGALAMLPLLAPHEQQSSKGSNAAGYKGKNKGIIFRERRIQQQQ
EEEEEQERTEATTPFFDSEDGSSIVEGLSSRDRHHRQVARSTKRLLLAKP
TPSEPITDPFAFVCDIARRPKFGHQYILCPSRSRRHRGEPIGLSVGPHWS
GVLYTISMIAVVTLFLTRVVLNDVAPWCQPAGVVCALITTALLLATAVTD
PGIVVQGAEGGEGEGSEYCEECSIWRPDGAEHCDECGVCILGLDHHCLWM
GKWTGQHTVVQAVQRIVDPVSVVLDGGVALSEYPLGGTLERFGF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001594Palmitoyltrfase_DHHC