mRNA_F-serratus_M_contig1132.1179.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1132.1179.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 2.020e-20 Identity = 50/122 (40.98%), Postives = 75/122 (61.48%), Query Frame = 1
Query: 4 AFLEADITEELYVELPDGYRDLPNQVGRLQKTMYGLMHAGLLWPKKFGGELIVKELERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHI 369
A+ A I EELYV + DG + +V ++++ +YGL +G W + L+ E+ +ADPCVFR+ GKVV IIV+YVDD++ + ++ E + L LR + P+KDLGE + Y GC I
Sbjct: 852 AYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGE-ELLTSLRKTLPVKDLGECTWYDGCAI 972
BLAST of mRNA_F-serratus_M_contig1132.1179.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 2.050e-20 Identity = 50/122 (40.98%), Postives = 75/122 (61.48%), Query Frame = 1
Query: 4 AFLEADITEELYVELPDGYRDLPNQVGRLQKTMYGLMHAGLLWPKKFGGELIVKELERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHI 369
A+ A I EELYV + DG + +V ++++ +YGL +G W + L+ E+ +ADPCVFR+ GKVV IIV+YVDD++ + ++ E + L LR + P+KDLGE + Y GC I
Sbjct: 1405 AYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGE-ELLTSLRKTLPVKDLGECTWYDGCAI 1525
BLAST of mRNA_F-serratus_M_contig1132.1179.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS) HSP 1 Score: 94.4 bits (233), Expect = 5.150e-20 Identity = 48/122 (39.34%), Postives = 75/122 (61.48%), Query Frame = 1
Query: 4 AFLEADITEELYVELPDGYRDLPNQVGRLQKTMYGLMHAGLLWPKKFGGELIVKELERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHI 369
A+L ++ EE+Y+ P+GY D +V RL+KT+YGL +G W ++F +L + +AD CV++R G++ II V+VDDLL+ SET +D + +L + F +KDLGE +G I
Sbjct: 994 AYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMT-IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEI 1114
BLAST of mRNA_F-serratus_M_contig1132.1179.1 vs. uniprot
Match: A0A284R853_ARMOS (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284R853_ARMOS) HSP 1 Score: 92.8 bits (229), Expect = 1.360e-19 Identity = 48/122 (39.34%), Postives = 74/122 (60.66%), Query Frame = 1
Query: 4 AFLEADITEELYVELPDGYRDLPNQVGRLQKTMYGLMHAGLLWPKKFGGELIVKELERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHI 369
A+L ++ EE+Y+ P+GY D +V RL+KT+YGL +G W +F +L + +AD CV++R G++ II V+VDDLL+ SET +D + +L + F +KDLGE +G I
Sbjct: 87 AYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGCEWNWEFDRKLTSIGFSKLEADHCVYKRIREGRMT-IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEI 207
BLAST of mRNA_F-serratus_M_contig1132.1179.1 vs. uniprot
Match: A0A6H5JK64_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK64_9PHAE) HSP 1 Score: 92.0 bits (227), Expect = 3.270e-19 Identity = 46/122 (37.70%), Postives = 74/122 (60.66%), Query Frame = 1
Query: 4 AFLEADITEELYVELPDGYRDLPNQVGRLQKTMYGLMHAGLLWPKKFGGELIVKELERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHI 369
A+ A + EE+Y+ LPDG + ++++ +YGL +G W + LI E+ + DPC+FR+ GKVV +IV+YVDD++ LS T+++ + L L+ F +KDLG+ + Y GC I
Sbjct: 872 AYTHAKLKEEIYLRLPDGCGVWTGKAVKVERALYGLKQSGREWGFEAADALISNGYEQCRVDPCIFRKVVDGKVVGLIVIYVDDIM-LSATEEEREELLASLQERFSVKDLGDCTWYDGCAI 992
BLAST of mRNA_F-serratus_M_contig1132.1179.1 vs. uniprot
Match: A0A2I0K810_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0K810_PUNGR) HSP 1 Score: 90.1 bits (222), Expect = 4.660e-19 Identity = 47/124 (37.90%), Postives = 74/124 (59.68%), Query Frame = 1
Query: 4 AFLEADITEELYVELPDGYRDLPNQ--VGRLQKTMYGLMHAGLLWPKKFGGELIVKELERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHI 369
AFL D+ EE+Y+ELP+G+R + V RL+K++YGL A W KKF ++ + R+ +D CVF ++ +I+++YVDD+L++S + ++L SF +KDLG LG HI
Sbjct: 39 AFLHGDLEEEIYMELPEGFRVKGKEHLVCRLRKSLYGLKQAPRQWYKKFDSFMLSHDYTRTTSDHCVFVKQFSDGDFIILLLYVDDMLLVSHDMSKIAELKKELSKSFAMKDLGPAKQILGMHI 162
BLAST of mRNA_F-serratus_M_contig1132.1179.1 vs. uniprot
Match: A0A6H5JLS1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS1_9PHAE) HSP 1 Score: 90.1 bits (222), Expect = 1.460e-18 Identity = 46/122 (37.70%), Postives = 73/122 (59.84%), Query Frame = 1
Query: 4 AFLEADITEELYVELPDGYRDLPNQVGRLQKTMYGLMHAGLLWPKKFGGELIVKELERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHI 369
A+ A + EE+++ LP G D +++G+ ++ +YGL +G W L+ E+ +ADPCVFR+ VV+IIV+YVDD+LV +E+ +D + L L+ FP K+LGE + C I
Sbjct: 278 AYTHATLDEEIFLRLPAGCGDKSHKIGKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDMLV-AESDEDCEELLASLKKKFPTKNLGECEWFHRCAI 398
BLAST of mRNA_F-serratus_M_contig1132.1179.1 vs. uniprot
Match: A0A6H5ILH6_9HYME (CCHC-type domain-containing protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5ILH6_9HYME) HSP 1 Score: 90.1 bits (222), Expect = 1.490e-18 Identity = 49/125 (39.20%), Postives = 78/125 (62.40%), Query Frame = 1
Query: 4 AFLEADITEELYVELPDGYRDLPN---QVGRLQKTMYGLMHAGLLWPKKFGGELIVKELERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHI 369
AFL ++ +E+Y+E+PDG N +V +LQ+T+YGL + +W ++F E+ LE+ +PC+F + GKV ++V+YVDD+++ S KQ + E L ++F +KDLGE S YLG I
Sbjct: 161 AFLNGNLEDEIYMEIPDGLEIEGNNRSKVCKLQRTIYGLKTSPKIWNQRFTAEVKKLGLEKDIHEPCLFTWRKEGKVA-LLVLYVDDIILASNCKQRLQEIKETLCNTFEMKDLGEPSRYLGMEI 284
BLAST of mRNA_F-serratus_M_contig1132.1179.1 vs. uniprot
Match: A0A6H5J752_9HYME (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichogramma brassicae TaxID=86971 RepID=A0A6H5J752_9HYME) HSP 1 Score: 90.1 bits (222), Expect = 1.530e-18 Identity = 49/125 (39.20%), Postives = 78/125 (62.40%), Query Frame = 1
Query: 4 AFLEADITEELYVELPDGYRDLPN---QVGRLQKTMYGLMHAGLLWPKKFGGELIVKELERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHI 369
AFL ++ +E+Y+E+PDG N +V +LQ+T+YGL + +W ++F E+ LE+ +PC+F + GKV ++V+YVDD+++ S KQ + E L ++F +KDLGE S YLG I
Sbjct: 710 AFLNGNLEDEIYMEIPDGLEIEGNNRSKVCKLQRTIYGLKTSPKIWNQRFTAEVKKLGLEKDIHEPCLFTWRKEGKVA-LLVLYVDDIILASNCKQRLQEIKETLCNTFEMKDLGEPSRYLGMEI 833
BLAST of mRNA_F-serratus_M_contig1132.1179.1 vs. uniprot
Match: A0A401GXA0_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GXA0_9APHY) HSP 1 Score: 86.7 bits (213), Expect = 2.040e-18 Identity = 45/122 (36.89%), Postives = 71/122 (58.20%), Query Frame = 1
Query: 4 AFLEADITEELYVELPDGYRDLPNQVGRLQKTMYGLMHAGLLWPKKFGGELIVKELERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHI 369
A+L D+ EE+Y+ P+G+ D V RL KT+YGL +G W +K +L ++ +ADPCV+ ++ G+V II V+VDDLL+ + + + + DL+ F + DLGE +G I
Sbjct: 87 AYLNGDLQEEIYMRQPEGFNDGSGHVCRLHKTLYGLKQSGHKWNRKLHRKLTELGYKQLEADPCVYLQEQKGEVQ-IITVWVDDLLLFTNSPKLMEELKRDLQDLFEVTDLGEPQKIIGFEI 207 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1132.1179.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1132.1179.1 >prot_F-serratus_M_contig1132.1179.1 ID=prot_F-serratus_M_contig1132.1179.1|Name=mRNA_F-serratus_M_contig1132.1179.1|organism=Fucus serratus male|type=polypeptide|length=123bp MAFLEADITEELYVELPDGYRDLPNQVGRLQKTMYGLMHAGLLWPKKFGGback to top mRNA from alignment at F-serratus_M_contig1132:188285..188653+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1132.1179.1 ID=mRNA_F-serratus_M_contig1132.1179.1|Name=mRNA_F-serratus_M_contig1132.1179.1|organism=Fucus serratus male|type=mRNA|length=369bp|location=Sequence derived from alignment at F-serratus_M_contig1132:188285..188653+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1132:188285..188653+ >mRNA_F-serratus_M_contig1132.1179.1 ID=mRNA_F-serratus_M_contig1132.1179.1|Name=mRNA_F-serratus_M_contig1132.1179.1|organism=Fucus serratus male|type=CDS|length=738bp|location=Sequence derived from alignment at F-serratus_M_contig1132:188285..188653+ (Fucus serratus male)back to top |