prot_F-serratus_M_contig1132.1179.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1132.1179.1
Unique Nameprot_F-serratus_M_contig1132.1179.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length123
Homology
BLAST of mRNA_F-serratus_M_contig1132.1179.1 vs. uniprot
Match: A0A6H5LQZ7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQZ7_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 1.940e-20
Identity = 47/122 (38.52%), Postives = 76/122 (62.30%), Query Frame = 0
Query:    2 AFLEADITEELYVELPDGYRDLPNQVGRLQKTMYGLMHAGLLWPKKFGGELIVKELERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHI 123
            A++ A + EE ++ LP G  D+  +V  +++ +YGL  +G  W  +    LI    E+ +ADPCVFRR    +VV +IV+YVDD+L+++ ++Q+  + L  L+  FP+KDLGE + Y G  I
Sbjct:  514 AYIHATLKEEFFIRLPQGCGDMSGKVCNVERALYGLKQSGREWGFEAADALIANGYEQCRADPCVFRRMVGAEVVGLIVIYVDDILLVA-SEQERQEVLASLQKKFPVKDLGECTWYDGIGI 634          
BLAST of mRNA_F-serratus_M_contig1132.1179.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 2.020e-20
Identity = 50/122 (40.98%), Postives = 75/122 (61.48%), Query Frame = 0
Query:    2 AFLEADITEELYVELPDGYRDLPNQVGRLQKTMYGLMHAGLLWPKKFGGELIVKELERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHI 123
            A+  A I EELYV + DG   +  +V ++++ +YGL  +G  W  +    L+    E+ +ADPCVFR+   GKVV IIV+YVDD++ +   ++ E + L  LR + P+KDLGE + Y GC I
Sbjct:  852 AYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGE-ELLTSLRKTLPVKDLGECTWYDGCAI 972          
BLAST of mRNA_F-serratus_M_contig1132.1179.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 2.050e-20
Identity = 50/122 (40.98%), Postives = 75/122 (61.48%), Query Frame = 0
Query:    2 AFLEADITEELYVELPDGYRDLPNQVGRLQKTMYGLMHAGLLWPKKFGGELIVKELERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHI 123
            A+  A I EELYV + DG   +  +V ++++ +YGL  +G  W  +    L+    E+ +ADPCVFR+   GKVV IIV+YVDD++ +   ++ E + L  LR + P+KDLGE + Y GC I
Sbjct: 1405 AYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGE-ELLTSLRKTLPVKDLGECTWYDGCAI 1525          
BLAST of mRNA_F-serratus_M_contig1132.1179.1 vs. uniprot
Match: A0A6H5K8K4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K4_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 5.130e-20
Identity = 46/122 (37.70%), Postives = 76/122 (62.30%), Query Frame = 0
Query:    2 AFLEADITEELYVELPDGYRDLPNQVGRLQKTMYGLMHAGLLWPKKFGGELIVKELERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHI 123
            A++ A   EE+++ LP    D+  +  ++++ +YGL  +G  W  +    LI    E+ +ADPCVFRR   G+VV +IV+YVDD+L+++ ++Q+  + L  L+  FP+KDLGE + Y G  I
Sbjct:  915 AYIHAKFKEEIFIRLPQSCGDMSGKACKVERALYGLKQSGREWGFEAADALIANGYEQCRADPCVFRRMVDGEVVGLIVIYVDDILLVA-SEQERQELLASLQKKFPVKDLGECTWYDGIGI 1035          
BLAST of mRNA_F-serratus_M_contig1132.1179.1 vs. uniprot
Match: A0A284QR88_ARMOS (Uncharacterized protein n=2 Tax=Armillaria TaxID=47424 RepID=A0A284QR88_ARMOS)

HSP 1 Score: 94.4 bits (233), Expect = 5.150e-20
Identity = 48/122 (39.34%), Postives = 75/122 (61.48%), Query Frame = 0
Query:    2 AFLEADITEELYVELPDGYRDLPNQVGRLQKTMYGLMHAGLLWPKKFGGELIVKELERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHI 123
            A+L  ++ EE+Y+  P+GY D   +V RL+KT+YGL  +G  W ++F  +L      + +AD CV++R   G++  II V+VDDLL+ SET +D  +   +L + F +KDLGE    +G  I
Sbjct:  994 AYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGREWNREFDRKLTSIGFSKLEADHCVYKRIREGRMT-IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEI 1114          
BLAST of mRNA_F-serratus_M_contig1132.1179.1 vs. uniprot
Match: A0A5S9X2Z9_ARATH (Uncharacterized protein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=A0A5S9X2Z9_ARATH)

HSP 1 Score: 93.2 bits (230), Expect = 1.320e-19
Identity = 47/128 (36.72%), Postives = 75/128 (58.59%), Query Frame = 0
Query:    2 AFLEADITEELYVELPDGYRDL------PNQVGRLQKTMYGLMHAGLLWPKKFGGELIVKELERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHI 123
            AFL  D+ E +Y++LPDGY D+      PN V RL+K++YGL  A   W  KF   L+    E+   D  +F R  +G   ++++VYVDD+++ S T+Q      E L++SF +++LG +  +LG  +
Sbjct: 1220 AFLNGDLEETIYMKLPDGYADIKGTSLPPNAVCRLKKSIYGLKQASRQWFLKFSNSLLALGFEKQHGDHTLFVR-CIGSEFIVLLVYVDDIVIASTTEQAAQSLTEALKASFKLRELGPLKYFLGLEV 1346          
BLAST of mRNA_F-serratus_M_contig1132.1179.1 vs. uniprot
Match: A0A284R853_ARMOS (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284R853_ARMOS)

HSP 1 Score: 92.8 bits (229), Expect = 1.360e-19
Identity = 48/122 (39.34%), Postives = 74/122 (60.66%), Query Frame = 0
Query:    2 AFLEADITEELYVELPDGYRDLPNQVGRLQKTMYGLMHAGLLWPKKFGGELIVKELERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHI 123
            A+L  ++ EE+Y+  P+GY D   +V RL+KT+YGL  +G  W  +F  +L      + +AD CV++R   G++  II V+VDDLL+ SET +D  +   +L + F +KDLGE    +G  I
Sbjct:   87 AYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGCEWNWEFDRKLTSIGFSKLEADHCVYKRIREGRMT-IITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEI 207          
BLAST of mRNA_F-serratus_M_contig1132.1179.1 vs. uniprot
Match: Q9SIM3_ARATH (Putative retroelement pol polyprotein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9SIM3_ARATH)

HSP 1 Score: 92.8 bits (229), Expect = 1.790e-19
Identity = 47/128 (36.72%), Postives = 75/128 (58.59%), Query Frame = 0
Query:    2 AFLEADITEELYVELPDGYRDL------PNQVGRLQKTMYGLMHAGLLWPKKFGGELIVKELERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHI 123
            AFL  D+ E +Y++LPDGY D+      PN V RL+K++YGL  A   W  KF   L+    E+   D  +F R  +G   ++++VYVDD+++ S T+Q      E L++SF +++LG +  +LG  +
Sbjct: 1059 AFLNGDLEETIYMKLPDGYADIKGTSLPPNVVCRLKKSIYGLKQASRQWFLKFSNSLLALGFEKQHGDHTLFVR-CIGSEFIVLLVYVDDIVIASTTEQAAQSLTEALKASFKLRELGPLKYFLGLEV 1185          
BLAST of mRNA_F-serratus_M_contig1132.1179.1 vs. uniprot
Match: A0A6H5L4A4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4A4_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 1.930e-19
Identity = 45/122 (36.89%), Postives = 75/122 (61.48%), Query Frame = 0
Query:    2 AFLEADITEELYVELPDGYRDLPNQVGRLQKTMYGLMHAGLLWPKKFGGELIVKELERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHI 123
            A++ A + EE  +  P+GY ++  +V ++++ +YGL  +G  W  +  G LI    E+ + DPCVFR+   G+VV +IV+YVDD+LV+++  + E +    L   FP++ LGE + Y GC I
Sbjct:   98 AYIHAKLKEETCLRFPEGYGNMSGKVVKVERALYGLKQSGREWGFEAAGALIENGYEQCRVDPCVFRKVVDGEVVSLIVIYVDDILVVADEGERE-ELFASLNKKFPVESLGEYTWYDGCAI 218          
BLAST of mRNA_F-serratus_M_contig1132.1179.1 vs. uniprot
Match: A0A6H5JK64_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK64_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 3.270e-19
Identity = 46/122 (37.70%), Postives = 74/122 (60.66%), Query Frame = 0
Query:    2 AFLEADITEELYVELPDGYRDLPNQVGRLQKTMYGLMHAGLLWPKKFGGELIVKELERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQALEDLRSSFPIKDLGEISNYLGCHI 123
            A+  A + EE+Y+ LPDG      +  ++++ +YGL  +G  W  +    LI    E+ + DPC+FR+   GKVV +IV+YVDD++ LS T+++  + L  L+  F +KDLG+ + Y GC I
Sbjct:  872 AYTHAKLKEEIYLRLPDGCGVWTGKAVKVERALYGLKQSGREWGFEAADALISNGYEQCRVDPCIFRKVVDGKVVGLIVIYVDDIM-LSATEEEREELLASLQERFSVKDLGDCTWYDGCAI 992          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1132.1179.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LQZ7_9PHAE1.940e-2038.52Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JKS3_9PHAE2.020e-2040.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L175_9PHAE2.050e-2040.98Uncharacterized protein n=9 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8K4_9PHAE5.130e-2037.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A284QR88_ARMOS5.150e-2039.34Uncharacterized protein n=2 Tax=Armillaria TaxID=4... [more]
A0A5S9X2Z9_ARATH1.320e-1936.72Uncharacterized protein n=1 Tax=Arabidopsis thalia... [more]
A0A284R853_ARMOS1.360e-1939.34Reverse transcriptase Ty1/copia-type domain-contai... [more]
Q9SIM3_ARATH1.790e-1936.72Putative retroelement pol polyprotein n=1 Tax=Arab... [more]
A0A6H5L4A4_9PHAE1.930e-1936.89Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JK64_9PHAE3.270e-1937.70CCHC-type domain-containing protein (Fragment) n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..123
e-value: 2.1E-22
score: 80.0
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 26..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1132contigF-serratus_M_contig1132:188285..188653 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1132.1179.1mRNA_F-serratus_M_contig1132.1179.1Fucus serratus malemRNAF-serratus_M_contig1132 188285..188653 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1132.1179.1 ID=prot_F-serratus_M_contig1132.1179.1|Name=mRNA_F-serratus_M_contig1132.1179.1|organism=Fucus serratus male|type=polypeptide|length=123bp
MAFLEADITEELYVELPDGYRDLPNQVGRLQKTMYGLMHAGLLWPKKFGG
ELIVKELERSQADPCVFRRKHLGKVVVIIVVYVDDLLVLSETKQDEHQAL
EDLRSSFPIKDLGEISNYLGCHI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2