mRNA_F-serratus_M_contig1125.1138.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1125.1138.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 644 bits (1661), Expect = 4.920e-213 Identity = 364/714 (50.98%), Postives = 455/714 (63.73%), Query Frame = 3
Query: 123 YTELGCYEDSQKRIFSEGTKRLDD--LTRTSCAAICEDFPYFGLQYGNECWCGDYTSEIDSDTESDGCDMTCTGDSDANCGGNYAMRIFTRAMTDD---------------DAIGCY-GDSTDRVFS-DKLVD-RSGMSPEVCFDHCNSEGALYYGTQWGEECWCGYDEEDYDRLGSAT-CDRPCSGDSTLFCGGTYAMTVYGIDD----TDDSXXXXXXXXXXXXXXGTSMPVSSPTPVMTIPDECAGT--KTSIRWASGTGLNGRMYLEDGGCGTMTDLYQSR-VESDGWTPKGPIYILDDDDEIMYSPTSVTGKWLLTSELFIRSGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEDGRSFLNCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGAQAAGIFLHRSSDSCEVYDNVIYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSEYGLYTYQGSDEPEASSDGRPGENSFYDNIISNTETGVKIKEADNTIITGNTFTGTSLLEFNDATDTAWSDNTFEDADDDLCYKNFESSSFASTDTLP 2180
Y+ GCY DS R+ S + + +T CA CE YFG+Q+G EC+C D ES+ C+M C+GDS CGG+YA++++ + +++GC+ DS+DRV S D ++ S M+ C D C EG+ Y+GT++ EC+C + D LG A+ CD CSGDS+ CGG A+ VY ++D XXXXXXXXXXXXXX +M I C + S R+A+ +G+ GR+Y E GC TMTDLY R E+DG + KGP+Y+LDDD + P+ +T WLL +EL+I G VFYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE T+VTSWDTPNK PQE YE+GRSFLNCVSE + + CEG KN+ GECRMDII+SE+ YLG+FDSESYG+TWKVRGFC D SNPEVF+ TNVYGD+ SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLTIA +GGA AAGIFLHRSSD V+DN I +MQDAG+A+LESFDA I+ N KYGIR+SLG GNN VY N F S+YGLYTY+GSDEP+ S DGRP N N++ + GVKIKE D+ NTF EF ++T+T WS N D D ++ E + + +D++P
Sbjct: 177 YSFAGCYVDSPDRVLSGDSMMSVNSVMTTAYCADFCEGSDYFGVQFGYECFCSSSGDTPDELGESEDCEMACSGDSSEICGGSYAIQVYEYSDXXXXXXXXXXXXXXXXXYESVGCFVDDSSDRVLSGDSMLSINSVMTAAYCADFC--EGSTYFGTEYAFECFCSSSGDSPDELGEASNCDMTCSGDSSETCGGFNAIQVYMLEDGPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMEISSSCGDDEDRPSFRYAASSGVAGRLYAEGEGCFTMTDLYNFRGTENDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGN---DIGDGCIEEDDEFDAASGSDSIP 883
BLAST of mRNA_F-serratus_M_contig1125.1138.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 533 bits (1372), Expect = 4.370e-175 Identity = 270/434 (62.21%), Postives = 319/434 (73.50%), Query Frame = 3
Query: 852 EDGGCGTMTDLYQSRVESDGWTPKGPIYILDDDDEIMYSPTSVTGKWLLTSELFIRSGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEDGRSFLNCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGAQAAGIFLHRSSDSCEVYDNVIYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSEYGLYTYQGSDEP-EASSDGRPGENSFYDNIISNTETGVKIKEADNTIITGNTFTGTSLLEFNDATDTAWSDNTFEDADDDLCYKNFES 2150
E GC T+TDLY R+ESDG + KGPI+ LDD + +P ++ KWLLT+EL I G+VFYCRG+SIGGDCDELRIQSTG TDFHEVR HGGS+YFE T+VTSWDTPNK+PQ Y GRSFLNCVSE + E C GQ +N+ GECRMDII+SE+GYLG+FDSESYGLTWKVRGFC D SNP+VFDTTNVYG++ SDIHH YYG YSYGHQGGVW NN+MHDNHQYGFDPHDDSDYLT +GG AAGIFLHRSSD V+DNV++DMQDAG+A+LES +ADI++N F++VK+GIR+SLG N+V++N+F+ S GLYTYQGSDEP + SDGRP +N F +N I N GVKIKE D+T+IT N FTGTS LEF DA +T W NT +C KN S
Sbjct: 83 EGEGCFTITDLYNFRLESDG-SAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLTSIIASKRCNNVQIYNNEVY------------DGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQG---VCIKNIHS 500
BLAST of mRNA_F-serratus_M_contig1125.1138.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 504 bits (1298), Expect = 6.110e-165 Identity = 261/462 (56.49%), Postives = 318/462 (68.83%), Query Frame = 3
Query: 852 EDGGCGTMTDLYQSR-VESDGWTPKGPIYILDDDDEIMYSPTSVTGKWLLTSELFIRSGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEDGRSFLNCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVR---------GFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGAQAAGIFLHRSSDSCEVYDNVIYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSEYGLYTYQGSDEPEASSDGRPGENSFYDNIISNTETGVKIKEADNTIITGNTFTGTSLLEFNDATDTAWSDNTFEDADDDLCYKNFES--------SSFASTDTLPS 2183
E GC T+TDLY R E+DG + KGP+Y+LD + +PTSVT KWLL +EL++ +G++FYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF T+VTSWDTPNK PQE YE GRSFLNCVSE + ETC+G KND GECRMDII+SEMGY+G+FDSESYGLTWKVR GFC D SNP+VF+TTNVYGDIKNSDIHHMYYG YSYGHQGGVWTNN+MHDNHQY +A +GG A GIFLHRSSD+ EVY N I++M DAG+A+LESF+ADIHDN V++GIR+SLG G N+VYDN F+ CS++GLYTY GSDEP+ S+ GRP N+F +N ++N+ GVK K +DN ++T N FTGT LEF DA T WS N+ +C N S S+F+S+ +PS
Sbjct: 18 ESEGCFTLTDLYNFRGTENDG-SSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLPSG---VCIDNITSDDGNSVPPSTFSSSSGVPS 462
BLAST of mRNA_F-serratus_M_contig1125.1138.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 483 bits (1244), Expect = 3.440e-157 Identity = 243/448 (54.24%), Postives = 305/448 (68.08%), Query Frame = 3
Query: 852 EDGGCGTMTDLYQSRVESDGWTPKGPIYILDDDDEIMYSPTSVTGKWLLTSELFIRSGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEDGRSFLNCVSEY-ESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGAQAAGIFLHRSSDSCEVYDNVIYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSEYGLYTYQGSDEPEASSDGRPGENSFYDNIISNTETGVKIKEADNTIITGNTFTGTSLLEFNDATDTAWSDNTFEDADDDLCYKNFESSS-FASTDTLPSLC 2189
+ GGC T++DLY + + KGP+++LD +D + + T+ TGKWLLT++LF+ G+ YCRG +GG+C ELRI+ST +DF E+RGHGG+LYFE T+VTSWD + PQE Y+DGRSF+ CVSE ++TC N+ GECRMDIIDSEMGYLG+ SE+YG+TWKVRGFC+D SNP+VFD NVYGD+K SDIHHMYYGMYS+GHQGGVWTNN MHDNHQYGFDPHDDSDYL IA +GGA AAGIFLHRS D EVY N I +M DAG+A+LE+ DIHDN ++GIR+ LG NN V+DNVF G++TY GSDEP GRP +N FY+N I TETGVKIKE+DN IT N F+GT+ +EFN+A D WS N+ + C ++ +++S F + LP C
Sbjct: 7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPT---NTCLEDIDNNSTFTGSSGLPLEC 447
BLAST of mRNA_F-serratus_M_contig1125.1138.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 478 bits (1231), Expect = 1.330e-152 Identity = 266/592 (44.93%), Postives = 354/592 (59.80%), Query Frame = 3
Query: 375 RIFTRAMTDDDAIGCYGDSTD-RVFSDKLVDRSGMSPEVCFDHCNSEGALYYGTQWGEECWCGYDEEDYDRL---GSATCDRPCSGDSTLFCGGTYAMTVYGIDDTDDSXXXXXXXXXXXXXXGTSMPVSSPTPVMTIPDECAGTKTSIRWASGTGLNGRMYLEDGGCGTMTDLYQSRVESDGWTPKGPIYILDDDDEIMYSPTSVTGKWLLTSELFIRSGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEDGRSFLNCVSEYESDET--CEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKS------NPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGAQAAGIFLHRSSDSCEVYDNVIYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSEYGLYTYQGSDEPEA-SSDGRPGENSFYDNIISNT--ETGVKIKEADNTIITGNTFTGTSLLEFNDATDTAWSDNT 2105
R +D +++GC+ D++D RV +L D++ M+P++C +C G YY QW ECWC + D L G TCD C GDS CGG +A TVY + GT ++PTP T + A T +R+ Y E GGCGT+T +Y+++ E DG P+Y+LD++++++ + TG WLL L + GS GT+ GD D LR+ ST S DF EVRG+GG+L+F+ T VTSWDT N +E DGRSF+NCV++++ C+G+ ++GECRMDII S MG +GWFD+ESYGLTWKVRG C N E+F+ NVYGDI NS+I+ MYYG YSYGHQGGVW +N M DN QYGFDPHDDSD LTI+ +GG A GIFLHRSSD EV+DNV+Y+MQDAG+A++ES+DA+I+DN+FTN +YGIR+SLG G N + +N+F ++YGLYTY GSD+P+ +S+GRP +N F N I GV IKE D+ + N FTG S EF D++DT W DNT
Sbjct: 62 RTLITGQSDPNSLGCFADTSDGRVMEAQLTDQA-MTPDMCNAYCEDLGYYYYAVQWSIECWCAPETTTADELAVHGLGTCDFACGGDSDQICGGFWAFTVYEV--------------------GTES--TTPTPSATTSCDSAAT---VRFTDDIA-----YFEGGGCGTLTQMYEAQ-EGDG-----PLYVLDENNDVVGG--TPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT 613
BLAST of mRNA_F-serratus_M_contig1125.1138.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 440 bits (1132), Expect = 5.580e-142 Identity = 219/348 (62.93%), Postives = 249/348 (71.55%), Query Frame = 3
Query: 873 MTDLYQSR-VESDGWTPKGPIYILDDDDEIMYSPTSVTGKWLLTSELFIRSGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEDGRSFLNCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWK--------VRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGAQAAGIFLHRSSDSCEVYDNVIYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSE 1889
MTDLY R E DG + KGP+Y+LDDD + P+ +T WLL +EL+I G VFYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE T+VTSWDTPNK PQE YE GRSFLNCVSE + + CEG KN+ GECRMDII+SE+ YLG+FDSESYG+TWK VRGFC D SNPEVFD TNVYGD+ SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLT +GGA A GIFLHRSSD V+DN I +MQDAG+A+LE+FDA I+ NT KYGIR+SLG GNN VY N F S+
Sbjct: 1 MTDLYNFRGTEKDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTRIIASKRCNNVKIFENEVR------------DGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335
BLAST of mRNA_F-serratus_M_contig1125.1138.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 417 bits (1071), Expect = 8.380e-133 Identity = 237/424 (55.90%), Postives = 276/424 (65.09%), Query Frame = 3
Query: 936 ILDDDDEIMYSPTSVTGKWLLTSELFIRSGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEDGRSFLNCVSEYESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGAQAAGIFLHRSSDSCEVYDNVIYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSEYGLYTYQGSDEPEASSDGRPGENSFYDNIISNTETGVKIKEADNTIITGNTFTGTSLLEFNDATDTAWSDNTFEDADDDLCYKNFES--------SSFASTDTLPS 2183
+LDD + SPTSVT KWLL SEL++ G++FYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF T+VTSWDTPNK PQE YE GRSFLNCVSE + ETC+G+ KND GECRMDII+SEMGY+G+FD+ESYGLTWKVRGFC D SNP+VF+TTNVYGDIKNS+IHHMYYGMYSYGHQGGVWTNN+MHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXX +GG +A GIFLHRSSD+ EVY G D P+ S+ GRP N+F +N I+NT GVKIK +DN +I+ N FTGT LEF DA T WSDN+ +C N S S+F+S+ +PS
Sbjct: 1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVSN-GRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLPSG---VCIDNVTSDDGNSVPPSTFSSSSGVPS 365
BLAST of mRNA_F-serratus_M_contig1125.1138.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 420 bits (1080), Expect = 7.930e-128 Identity = 225/459 (49.02%), Postives = 292/459 (63.62%), Query Frame = 3
Query: 837 GRMYLEDGGCGTMTDLYQSRVESDGWTPKGPIYILDDDDEIMYSPTSVTGKWLLTSELFIRSGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEDGRSFLNCVSEYESD--ETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGAQAAGIFLHRSSDSCEVYDNVIYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSEYGLYTYQGSDEPEASSD--GRPGENSFYDNIISNTETGVKIKEADNTIITGNTFTGTSLLE---FNDATDTAWSDNTFEDADDDLCYKNFESSSFA-STDTLPSLC 2189
G+ Y+ GGC T+TD+Y ++ G GP+++LD +D ++ S TG WLL ++ + GS+ G GGD LRIQSTGS D++E+RGHGGSL F T VTSWDT K +Y+ RSF+ CVSE +D +TC+G N GECRMDII SEMG +G+ +ESYG++WKVRG+C++ NPEVF+ T V GDI +SDI+ MYYG YS+GH GG+WT NKMHDN QYGFDPHDDSD L IA +GG A GIFLHRSSD CEV+ N +YDM+DAG+AI+ES A IHDNTFTNVKYGIR+S+G N V +N F +C +YG+YTYQG+D+PEAS D G +N+F+ N + E GVKI++A+ + T N F S E F D D W++N D D+C K ++ + S D+LP LC
Sbjct: 398 GKNYIRGGGCATLTDIYTAQG---GHNDDGPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPD---DICLKGDKNIDYMKSYDSLPDLC 845
BLAST of mRNA_F-serratus_M_contig1125.1138.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 385 bits (988), Expect = 1.220e-118 Identity = 220/464 (47.41%), Postives = 273/464 (58.84%), Query Frame = 3
Query: 804 SIRWASGTGLNGRMYLED-------GGCGTMTDLYQSRVESDGWTPKGPIYILDDDDEIMYSPTSVTGKWLLTSELFIRSGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEDGRSFLNCVSEY--ESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGAQAAGIFLHRSSDSCEVYDNVIYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSEYGLYTYQGSDEPEASSDGRPGENSFYDNIISNTETGVKIKEADNTIITGNTF-TGTS---LLEFNDATDTAWSDNTFED-------ADDDLCY 2135
SIR+A G R+YLE GGC T+ +++SR KGP+Y +D D + TS TG WLLT EL++ G G+ GGD DELR+ ST T F +R HGGSL F T V SWDT SP ED DGRS+++ +SE + DETCEG KN GE RMDI SE+GYLG++DSESYGLTWKVRGFC DKSNPEVFD NVYG++ +SDIHHM +G+Y+YGHQ G W NKMHDN YGFDPHDDSD+LTI G +AGIFLHRSSD V N ++D DAGLA+LESF+AD+ +NTF N KYG+R S+G +N +N +EY Y+Y G+DEP+ S GR N F N S E +KIKEAD T N F G + ++ F++AT+ NT D D+D C+
Sbjct: 45 SIRYA---GTTARLYLESADNGTTRGGCVTLGQIWESRAG------KGPLYAVDPDSGNV--STSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNET-FINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACF 496
BLAST of mRNA_F-serratus_M_contig1125.1138.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 381 bits (978), Expect = 3.950e-117 Identity = 222/470 (47.23%), Postives = 279/470 (59.36%), Query Frame = 3
Query: 750 SSPTPVMTIPDECAGTKTSIRWASGTGLNGRMYLED------GGCGTMTDLYQSRVESDGWTPKGPIYILDDDDEIMYSPTSVTGKWLLTSELFIRSGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYEDGRSFLNCVSEY--ESDETCEGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGAQAAGIFLHRSSDSCEVYDNVIYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDQCSEYGLYTYQGSDEPEASSDGRPGENSFYDNIISNTETGVKIKEADNTIITGNTF-TGTS---LLEFNDATDTAWSDNTFEDADD 2123
+SP ++ PD + + SIR+A G R+YLE GGC T+ +++SR K P+Y +D D + S T TG WLLT EL++ G GT GGD DELR+ ST T + +R HGGSL F T V SWDT SP ED DGRS+++ VSE + DETCEG KN GE RMDI +SE+GYLG+ DSESYGLTWKVRGFC DKSNPE+FD NVYG++ +SDIHH+ +G+Y+YGHQ G W NKMHDN YGFDPHDDSD+LTI G +AGIFLHRSSD V N ++D DAGLA+LESF+AD+ +NTF N KYG+R+S+G +N +N+ S+Y YTY GSDEP+ S GR N F N S E +KIKEAD T N F G + ++ F+DA ++ NT D D
Sbjct: 32 ASPNDPISKPDCDSDIEVSIRYA---GTTKRLYLESADGETRGGCATLGQIWESRAG------KAPLYAVDPDSGDV-SETE-TGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSET-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGD 489 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1125.1138.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1125.1138.1 >prot_F-serratus_M_contig1125.1138.1 ID=prot_F-serratus_M_contig1125.1138.1|Name=mRNA_F-serratus_M_contig1125.1138.1|organism=Fucus serratus male|type=polypeptide|length=729bp MARSAAFAMALTLPAALGFLSDNLAAATNVVSQTFADAEYTELGCYEDSQback to top mRNA from alignment at F-serratus_M_contig1125:286451..292373- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1125.1138.1 ID=mRNA_F-serratus_M_contig1125.1138.1|Name=mRNA_F-serratus_M_contig1125.1138.1|organism=Fucus serratus male|type=mRNA|length=5923bp|location=Sequence derived from alignment at F-serratus_M_contig1125:286451..292373- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1125:286451..292373- >mRNA_F-serratus_M_contig1125.1138.1 ID=mRNA_F-serratus_M_contig1125.1138.1|Name=mRNA_F-serratus_M_contig1125.1138.1|organism=Fucus serratus male|type=CDS|length=4374bp|location=Sequence derived from alignment at F-serratus_M_contig1125:286451..292373- (Fucus serratus male)back to top |