prot_F-serratus_M_contig1122.1128.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1122.1128.1
Unique Nameprot_F-serratus_M_contig1122.1128.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length881
Homology
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BLAST of mRNA_F-serratus_M_contig1122.1128.1 vs. uniprot
Match: A0A6H5JTB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB3_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 3.630e-18
Identity = 119/281 (42.35%), Postives = 140/281 (49.82%), Query Frame = 0 
Query:  298 VFVALSSSLVFLNLSRNKFQGEMPLGDLLP-------RPGKEEATNQKEAKNSGSCEEPKVALPAEMTGSPISYLNLSRNKLTGHIPEEIGALNSLTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGLRSLRLEGNPSLEGPIPDYLAARSECMVSADKTVLEDTEARMLGSRLEEWFLVPRKA 571
            +   LSSSLV+LNL  N F+G++P+  L         R G    + Q + +   S  +   +  A ++ SP+SYLNL  NK TGH+PEEIG+L SL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                        TGLRSLRLE NPSL GPIPD LA+   C V AD+ VLEDTEA MLGS+L+EWFL+PRKA
Sbjct:  386 ILSTLSSSLVYLNLGHNAFEGDLPVSPLSSHSAGGRVRRGSRSGS-QSDGQGRNSRRKRSESAAAVVSASPLSYLNLCHNKFTGHVPEEIGSLTSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGDDGGGLGRLSSLEILRLDGNTFHGIVPAALGNLARLEVLHLQLDRLWALAVRDNNLSGRVPESLGCL-------------------TGLRSLRLEENPSLRGPIPDQLASGVNCNVRADQPVLEDTEAAMLGSKLDEWFLMPRKA 646
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BLAST of mRNA_F-serratus_M_contig1122.1128.1 vs. uniprot
Match: D7FPI3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI3_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 2.540e-12
Identity = 164/280 (58.57%), Postives = 186/280 (66.43%), Query Frame = 0 
Query:  298 VFVALSSSLVFLNLSRNKFQGEMPLGDLLPRPG----KEEATNQKEAKNSGSCEEPKVALPAE--MTGSPISYLNLSRNKLTGHIPEEIGALNSLTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGLRSLRLEGNPSLEGPIPDYLAARSECMVSADKTVLEDTEARMLGSRLEEWFLVPRKA 571
            V  ALSSSLV+LNL  N F+G++P+  L P       +  +T+   ++  G     + +  A   ++ SP+SYLNL  NK TG + EEIG+L S   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      RLE NPSL GPIPD LA+   C V AD+ VL+DTEA MLGSRL+EWFL+PRKA
Sbjct:  247 VLSALSSSLVYLNLGHNAFEGDLPVSPLSPHSAGGRVRRGSTSGSPSEGQGRSSRRRRSESAAGVVSASPLSYLNLCHNKFTGRVSEEIGSLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGILEGDDGGGLGRLSSLETLRLDGNTFHGIVPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----RLEENPSLRGPIPDQLASGVNCNVRADQPVLDDTEATMLGSRLDEWFLMPRKA 521
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1122.1128.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JTB3_9PHAE3.630e-1842.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPI3_ECTSI2.540e-1258.57Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00019LEURICHRPTcoord: 280..293
score: 52.16
coord: 383..396
score: 56.48
NoneNo IPR availablePANTHERPTHR45974:SF125PHYTOSULFOKINE RECEPTOR 1coord: 208..423
coord: 84..249
coord: 442..535
NoneNo IPR availablePANTHERPTHR45974:SF125PHYTOSULFOKINE RECEPTOR 1coord: 150..321
NoneNo IPR availablePANTHERPTHR45974FAMILY NOT NAMEDcoord: 208..423
NoneNo IPR availablePANTHERPTHR45974FAMILY NOT NAMEDcoord: 150..321
coord: 84..249
coord: 442..535
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 91..422
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 363..535
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 229..252
e-value: 66.0
score: 6.6
coord: 253..276
e-value: 95.0
score: 5.2
coord: 383..407
e-value: 0.25
score: 20.4
coord: 277..301
e-value: 0.018
score: 24.2
coord: 153..177
e-value: 31.0
score: 9.2
coord: 464..488
e-value: 81.0
score: 5.8
coord: 440..463
e-value: 52.0
score: 7.4
coord: 129..149
e-value: 340.0
score: 0.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 28..191
e-value: 2.6E-35
score: 123.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 349..577
e-value: 1.3E-47
score: 164.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 192..348
e-value: 1.6E-35
score: 124.1
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 209..266
e-value: 3.4E-7
score: 29.9
coord: 363..418
e-value: 3.6E-7
score: 29.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1122contigF-serratus_M_contig1122:171289..179489 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1122.1128.1mRNA_F-serratus_M_contig1122.1128.1Fucus serratus malemRNAF-serratus_M_contig1122 171222..179753 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1122.1128.1 ID=prot_F-serratus_M_contig1122.1128.1|Name=mRNA_F-serratus_M_contig1122.1128.1|organism=Fucus serratus male|type=polypeptide|length=881bp
MVVKLSRHQLAEILHRAGIDSDDEIELQLQTLDKIKSSTIDSDKLDQDRL
KELLWHYDEDFKEWEESPETFDWDGISVDLDKRVTAIHISNKNFYGEIPS
GLGEFAHLEQFHASCNQFTGDIPATIGGLSRLTSLRLDHNYLSGKLFSSL
TQLANLTVLDMARNRISGTIPTKLSRMTSLRRLSLGMNKARHCLTGVIPK
QLESLAFLVELRMPENKLEGKIPPQLGNMSSLQALDLASNNLQGCIPASF
GSLTDLRELWLSNNNLLGGIPETLGKLTNLQSLDLSSNKLASRLPRRVFV
ALSSSLVFLNLSRNKFQGEMPLGDLLPRPGKEEATNQKEAKNSGSCEEPK
VALPAEMTGSPISYLNLSRNKLTGHIPEEIGALNSLTTLDLSHNKLSGQL
PPGIGGCSALRTLSLSQCCLTGVLDGSDDGAVGPWGLGMLTLLETLRLDG
NEFEGNVPTAFGDLTCLKVLQLQGNEFSGCLPSSLGQLDQLWAFVVRDNR
LSGRVPESLSRLTGLRSLRLEGNPSLEGPIPDYLAARSECMVSADKTVLE
DTEARMLGSRLEEWFLVPRKAFLNLSEFPGHVSIGPSLVRCVSTVVAYEC
HVFVDAKGKRLVVRRSEIAFFSHCWNLRRHQCPPSPALLEGPHSDSSDRA
KLRHMKACLGDAPSDIQYVWLDMLCVPLADPKRRRASGRSLPFFVQNSAR
LYFLGADEAGIERLKTRAWCRLEALCAACPLQPCNTLSAFSPKPRHDSSD
VRFTYNSVECFSSTWENGARIQERVGGIDGLASAGFIQNPATGKMSDQND
RQDLAEATLAVVDVMDLAGCVDAAFAETLRKSCKLIFFREHEPEGDVQSL
LSFETYYGGRFGRFSRRKRVTPSVSSPTTT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt